Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028541

Identifier: 238028541

GI number: 238028541

Start: 3407982

End: 3409391

Strand: Direct

Name: 238028541

Synonym: bglu_1g30050

Alternate gene names: NA

Gene position: 3407982-3409391 (Clockwise)

Preceding gene: 238028540

Following gene: 238028542

Centisome position: 87.24

GC content: 69.72

Gene sequence:

>1410_bases
GTGAATTCCGTTGCGATGCAATCCGCCGCCGACGCGTCGAAGACGCGCAGCTCCAACGCGCTGGGCCGGCTCGGGCCGAT
GCGCCGGTTTATCGCGCCGGCCGTCACGCGGCCGTTCGCGATCGTCGAGGCGGTCGCGTTCGTCATGCTGGCGCTGGCCG
TGAGCCGCCTGTGCTCGCCGCACGATCCGCTGCTGCTGCAGGCCGGCTTCCCTTGGTTGTGGTTCCCGCCGATGATCGTC
GCGCTGCGTTACGGCACGCTGCTCGGGCTGCTTGGCGGCGCGCTGATGGTGGCCGCCTGGAAGCTCGGCTATCCGCCGGG
GGCGCCGTGGCCGGTGATGATGTTCGTGGGCGGCCTGACCCAGACGGTGATCGCCGGGCACTTCGGCGACACCTGGGGCC
ATCGGGCGCGGCGCGCCTCGACGCTCAACGATTACCTGAACGAACGGCTCGTCGCGATCACCAACAGCCACTACCTGATG
CGCCTGTCGCACGAGCGGCTGGAAAAGGATCTGCTGTCCAAGCCCACCACCCTGCGCGACTCGATCACCGAACTGCGGCG
CCTGTCGGTCGGCGCCGAGCCGCAGGATGGGCCCGGCGCGCCCGCACCGTTGCGTGCGCTGCCGTCGGCGGCGGGCATGC
TCGAATTCGTGGCGCAGGTCTGCCAGATCGAGATCGGCGCGGTGTTTCCGGTGCTCGACGGCCGGCCCGCGACCGAGGCC
GTGGCCTGCGTCGGCGATGCGTTCCCGCTGTGCACGAGCGACGAACTCGTGGTGCACGCGCTGCGTACCCGAAGCGTCGC
GCACTTGCGCGGCGAACATGCCGACCTCGCACAGAGCGCTTACCTGGTGTGCGCCCCGTTGGTGAGCGCCGACGGCGAGG
TGATCGCGCTGCTGGCGGTGCCGCGCATGCCGTTCCTGGCGCTGAACTTCGACAACCTGCAGCTGCTGCTCGTGTTGCTC
GCGTATTACGCGGACGGCGTCGAGCATGCGAGCGTGGTGCGCGACATTCTTGCCGACGTGCCGGGCTGCCCATACGACTT
CGCGCTCGATCTCGGCCGCCTCGCGCGTTTGAATCGCGACGCGGGCATCGCGTCGTCGCTGGTCGCGCTGGCGTTTCCGC
GCAGCGAAGCGGGCGATTCGCTGTTCGAGCACGTGCTGCGCCGCCGCCGCGCACTCGACCTGATGTGGCCGCTGCAGACC
GCCTCGCATTCGGTGCTGGTGAACCTGATGCCGGCCACCGACACGACCGGCGTCGACGGCTACCTGGCGCGCATCGAAAC
CAGTCTCGACTCGCAGTTCGGGCTCGACATGGAACGCGCCCATATCGGCGTGCACACGCTGCACCTGGGCCCGCTCGAAC
CGGGCGCGGCGTTGCGGCGCCTGCTCAAGCGCAGTGGCGTCGATGTCTAG

Upstream 100 bases:

>100_bases
CTGATCGAGAAGGTGCTCGCGCCGCTCGCGCCACGTGGCTGAGGCCGGGCGCGCCACGCGCTTGCCCTTGCGCTTCCGAA
CTCATGAAAAGGAACCGGCA

Downstream 100 bases:

>100_bases
GCCCGCCGTCTTCGTCGCCGGCGTGCTGCGCGTGGCGGGCTGCCTGCTGGCGGAGGCGCTCGTCTGGCGGGCGGCCGGGC
GGGCCGGCGCGGACTTCGAT

Product: putative transmembrane protein

Products: NA

Alternate protein names: Polysaccharide Transporter Component Transmembrane Protein

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MNSVAMQSAADASKTRSSNALGRLGPMRRFIAPAVTRPFAIVEAVAFVMLALAVSRLCSPHDPLLLQAGFPWLWFPPMIV
ALRYGTLLGLLGGALMVAAWKLGYPPGAPWPVMMFVGGLTQTVIAGHFGDTWGHRARRASTLNDYLNERLVAITNSHYLM
RLSHERLEKDLLSKPTTLRDSITELRRLSVGAEPQDGPGAPAPLRALPSAAGMLEFVAQVCQIEIGAVFPVLDGRPATEA
VACVGDAFPLCTSDELVVHALRTRSVAHLRGEHADLAQSAYLVCAPLVSADGEVIALLAVPRMPFLALNFDNLQLLLVLL
AYYADGVEHASVVRDILADVPGCPYDFALDLGRLARLNRDAGIASSLVALAFPRSEAGDSLFEHVLRRRRALDLMWPLQT
ASHSVLVNLMPATDTTGVDGYLARIETSLDSQFGLDMERAHIGVHTLHLGPLEPGAALRRLLKRSGVDV

Sequences:

>Translated_469_residues
MNSVAMQSAADASKTRSSNALGRLGPMRRFIAPAVTRPFAIVEAVAFVMLALAVSRLCSPHDPLLLQAGFPWLWFPPMIV
ALRYGTLLGLLGGALMVAAWKLGYPPGAPWPVMMFVGGLTQTVIAGHFGDTWGHRARRASTLNDYLNERLVAITNSHYLM
RLSHERLEKDLLSKPTTLRDSITELRRLSVGAEPQDGPGAPAPLRALPSAAGMLEFVAQVCQIEIGAVFPVLDGRPATEA
VACVGDAFPLCTSDELVVHALRTRSVAHLRGEHADLAQSAYLVCAPLVSADGEVIALLAVPRMPFLALNFDNLQLLLVLL
AYYADGVEHASVVRDILADVPGCPYDFALDLGRLARLNRDAGIASSLVALAFPRSEAGDSLFEHVLRRRRALDLMWPLQT
ASHSVLVNLMPATDTTGVDGYLARIETSLDSQFGLDMERAHIGVHTLHLGPLEPGAALRRLLKRSGVDV
>Mature_469_residues
MNSVAMQSAADASKTRSSNALGRLGPMRRFIAPAVTRPFAIVEAVAFVMLALAVSRLCSPHDPLLLQAGFPWLWFPPMIV
ALRYGTLLGLLGGALMVAAWKLGYPPGAPWPVMMFVGGLTQTVIAGHFGDTWGHRARRASTLNDYLNERLVAITNSHYLM
RLSHERLEKDLLSKPTTLRDSITELRRLSVGAEPQDGPGAPAPLRALPSAAGMLEFVAQVCQIEIGAVFPVLDGRPATEA
VACVGDAFPLCTSDELVVHALRTRSVAHLRGEHADLAQSAYLVCAPLVSADGEVIALLAVPRMPFLALNFDNLQLLLVLL
AYYADGVEHASVVRDILADVPGCPYDFALDLGRLARLNRDAGIASSLVALAFPRSEAGDSLFEHVLRRRRALDLMWPLQT
ASHSVLVNLMPATDTTGVDGYLARIETSLDSQFGLDMERAHIGVHTLHLGPLEPGAALRRLLKRSGVDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50582; Mature: 50582

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVAMQSAADASKTRSSNALGRLGPMRRFIAPAVTRPFAIVEAVAFVMLALAVSRLCSP
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HDPLLLQAGFPWLWFPPMIVALRYGTLLGLLGGALMVAAWKLGYPPGAPWPVMMFVGGLT
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QTVIAGHFGDTWGHRARRASTLNDYLNERLVAITNSHYLMRLSHERLEKDLLSKPTTLRD
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHEEEHHHHHHHHHHHCCCCHHHH
SITELRRLSVGAEPQDGPGAPAPLRALPSAAGMLEFVAQVCQIEIGAVFPVLDGRPATEA
HHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHH
VACVGDAFPLCTSDELVVHALRTRSVAHLRGEHADLAQSAYLVCAPLVSADGEVIALLAV
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PRMPFLALNFDNLQLLLVLLAYYADGVEHASVVRDILADVPGCPYDFALDLGRLARLNRD
CCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
AGIASSLVALAFPRSEAGDSLFEHVLRRRRALDLMWPLQTASHSVLVNLMPATDTTGVDG
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCH
YLARIETSLDSQFGLDMERAHIGVHTLHLGPLEPGAALRRLLKRSGVDV
HHHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSVAMQSAADASKTRSSNALGRLGPMRRFIAPAVTRPFAIVEAVAFVMLALAVSRLCSP
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HDPLLLQAGFPWLWFPPMIVALRYGTLLGLLGGALMVAAWKLGYPPGAPWPVMMFVGGLT
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QTVIAGHFGDTWGHRARRASTLNDYLNERLVAITNSHYLMRLSHERLEKDLLSKPTTLRD
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHEEEHHHHHHHHHHHCCCCHHHH
SITELRRLSVGAEPQDGPGAPAPLRALPSAAGMLEFVAQVCQIEIGAVFPVLDGRPATEA
HHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHH
VACVGDAFPLCTSDELVVHALRTRSVAHLRGEHADLAQSAYLVCAPLVSADGEVIALLAV
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PRMPFLALNFDNLQLLLVLLAYYADGVEHASVVRDILADVPGCPYDFALDLGRLARLNRD
CCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
AGIASSLVALAFPRSEAGDSLFEHVLRRRRALDLMWPLQTASHSVLVNLMPATDTTGVDG
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCH
YLARIETSLDSQFGLDMERAHIGVHTLHLGPLEPGAALRRLLKRSGVDV
HHHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA