Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028540

Identifier: 238028540

GI number: 238028540

Start: 3407381

End: 3407923

Strand: Direct

Name: 238028540

Synonym: bglu_1g30040

Alternate gene names: NA

Gene position: 3407381-3407923 (Clockwise)

Preceding gene: 238028539

Following gene: 238028541

Centisome position: 87.22

GC content: 72.38

Gene sequence:

>543_bases
ATGGAACGTGGCAAGCGGGCTCGGTCGTGGTGCGCGGCGGCCCTCGCAGCAACGCTGCTGCTGGCCGGCTGCGGTACGCT
GAAGAGCACGGCGGCGCCGGCGCTGCAGGCGCACGACGCGGTGGCGGTCGGCTCGATCGCGAACTACACCGAAACGCCTT
CGGCCGGCCAGAGCGCCGCGTCGATCGCAGCCAACGTACTGCGCGCGGACGGCCTCGCGGACGTGCGCCTCGCGCCCGAC
GACGCGGGTTCGAACGCGCTGTTCGATACCGCGCAGCGCAGCGACGGGCAGCAGAAGCTGGCGTGGGCGCGGTCCCGGCA
GATCCGCTATGTCCTGTCCGGCTCGGTCGAGGAGTGGCGCTACAAGACCGGCGTGGACGGCGAGCCGGTGGTCGGCCTGA
CCTTCGAGCTGACCGACGTGAACACCGGCAAGGTGGTCTGGAGCGCCACCGGCACGCGCAGCGGCTGGAGCCGTTCGAGC
CTCGCGGGCGTGGCTACCGGGCTGATCGAGAAGGTGCTCGCGCCGCTCGCGCCACGTGGCTGA

Upstream 100 bases:

>100_bases
CGGCGGCCGCTACAGCTGGTTCTATTGACGCGCGAGCCGACCCGGCCCGCGCGCCGCGAATGCATGACGACATGAACGAA
GGGGCAAGGAAATGAGTGGA

Downstream 100 bases:

>100_bases
GGCCGGGCGCGCCACGCGCTTGCCCTTGCGCTTCCGAACTCATGAAAAGGAACCGGCAGTGAATTCCGTTGCGATGCAAT
CCGCCGCCGACGCGTCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Lipoprotein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MERGKRARSWCAAALAATLLLAGCGTLKSTAAPALQAHDAVAVGSIANYTETPSAGQSAASIAANVLRADGLADVRLAPD
DAGSNALFDTAQRSDGQQKLAWARSRQIRYVLSGSVEEWRYKTGVDGEPVVGLTFELTDVNTGKVVWSATGTRSGWSRSS
LAGVATGLIEKVLAPLAPRG

Sequences:

>Translated_180_residues
MERGKRARSWCAAALAATLLLAGCGTLKSTAAPALQAHDAVAVGSIANYTETPSAGQSAASIAANVLRADGLADVRLAPD
DAGSNALFDTAQRSDGQQKLAWARSRQIRYVLSGSVEEWRYKTGVDGEPVVGLTFELTDVNTGKVVWSATGTRSGWSRSS
LAGVATGLIEKVLAPLAPRG
>Mature_180_residues
MERGKRARSWCAAALAATLLLAGCGTLKSTAAPALQAHDAVAVGSIANYTETPSAGQSAASIAANVLRADGLADVRLAPD
DAGSNALFDTAQRSDGQQKLAWARSRQIRYVLSGSVEEWRYKTGVDGEPVVGLTFELTDVNTGKVVWSATGTRSGWSRSS
LAGVATGLIEKVLAPLAPRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18641; Mature: 18641

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERGKRARSWCAAALAATLLLAGCGTLKSTAAPALQAHDAVAVGSIANYTETPSAGQSAA
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHH
SIAANVLRADGLADVRLAPDDAGSNALFDTAQRSDGQQKLAWARSRQIRYVLSGSVEEWR
HHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHH
YKTGVDGEPVVGLTFELTDVNTGKVVWSATGTRSGWSRSSLAGVATGLIEKVLAPLAPRG
HCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MERGKRARSWCAAALAATLLLAGCGTLKSTAAPALQAHDAVAVGSIANYTETPSAGQSAA
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHH
SIAANVLRADGLADVRLAPDDAGSNALFDTAQRSDGQQKLAWARSRQIRYVLSGSVEEWR
HHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHH
YKTGVDGEPVVGLTFELTDVNTGKVVWSATGTRSGWSRSSLAGVATGLIEKVLAPLAPRG
HCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA