| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yjbE [H]
Identifier: 238028528
GI number: 238028528
Start: 3387989
End: 3388693
Strand: Reverse
Name: yjbE [H]
Synonym: bglu_1g29920
Alternate gene names: 238028528
Gene position: 3388693-3387989 (Counterclockwise)
Preceding gene: 238028529
Following gene: 238028527
Centisome position: 86.74
GC content: 70.21
Gene sequence:
>705_bases ATGATCGAATTTCTCGCCACGCTTCATTGGGGCGCCGTCCTGCAGATCGTCGTCATCGATCTGCTGCTCGGCGGCGACAA CGCCGTCGTGATCGCACTGGCCTGCCGCAACCTGCCGGACTCGCAACGCCTGCGCGGCGTGATCTGGGGCACCGTGGGGG CGATCGTGCTGCGCGTGGTGTTGATCACGTTCGCGGTGCTGCTGCTCGATATCCCGTTCCTGAAGCTCGCGGGCGGCCTG CTGCTGCTCTGGATCGGCGCGAAGCTGCTGGTGCCCGACGACGCCGCGCACGACGGCATCCAGGGCGCGGACCGGCTGTG GGCCGCGGTGCGCACCATCATCGTGGCCGACGCGGTGATGAGCATCGACAACGTGATCGCGATCGCGGGCGCCGCCGAGC GCGCCGACCCGGAGCATCGGCTCGCGCTCGTGATCTTCGGCCTGGTGGTCAGCATCCCGGTGATCGTCTGGGGCAGCACG CTGGTATTGAAACTGCTCGACCGTTTCCCGGTGATCGTGATGCTCGGCGCGGCGCTGCTCGGCTGGATCGCGGGCGGGCT GATCATCGCCGACCCCGCGCTCGACCGCTGGCCGCAGCTCGACGCGCCCGCCGCCGGATATGGCGCGAGCATCGCCGGGG CGATCCTGGTGGTGGTGGCCGGCATGGCGTGGAAGCGGCGCCGCCGCCCGGCCGGCGCGCATTGA
Upstream 100 bases:
>100_bases CGCGCCTCGAGCGCGCCCGGCTTCGCGCCACGCCCCGCCGCCGGCACCAGCCGTTCGCCCGCGTCTGTTCCCATCTTCTT CTTTGCTGCCATTCCTGCCG
Downstream 100 bases:
>100_bases GGGGCGGCCTCGCCGCCTCGGCCCGACGCGGCCGCGGCGGGCGAGGGCGATGCGCGCGTGCTTGCCCCGGCCGCGACCCT GGCCGTCCGGCCGACTGCCC
Product: Integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVVLITFAVLLLDIPFLKLAGGL LLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVMSIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGST LVLKLLDRFPVIVMLGAALLGWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH
Sequences:
>Translated_234_residues MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVVLITFAVLLLDIPFLKLAGGL LLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVMSIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGST LVLKLLDRFPVIVMLGAALLGWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH >Mature_234_residues MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVVLITFAVLLLDIPFLKLAGGL LLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVMSIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGST LVLKLLDRFPVIVMLGAALLGWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022301 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 24685; Mature: 24685
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVV CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LITFAVLLLDIPFLKLAGGLLLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVM HHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGSTLVLKLLDRFPVIVMLGAALL HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH HHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVV CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LITFAVLLLDIPFLKLAGGLLLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVM HHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGSTLVLKLLDRFPVIVMLGAALL HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH HHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]