Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yjbE [H]

Identifier: 238028528

GI number: 238028528

Start: 3387989

End: 3388693

Strand: Reverse

Name: yjbE [H]

Synonym: bglu_1g29920

Alternate gene names: 238028528

Gene position: 3388693-3387989 (Counterclockwise)

Preceding gene: 238028529

Following gene: 238028527

Centisome position: 86.74

GC content: 70.21

Gene sequence:

>705_bases
ATGATCGAATTTCTCGCCACGCTTCATTGGGGCGCCGTCCTGCAGATCGTCGTCATCGATCTGCTGCTCGGCGGCGACAA
CGCCGTCGTGATCGCACTGGCCTGCCGCAACCTGCCGGACTCGCAACGCCTGCGCGGCGTGATCTGGGGCACCGTGGGGG
CGATCGTGCTGCGCGTGGTGTTGATCACGTTCGCGGTGCTGCTGCTCGATATCCCGTTCCTGAAGCTCGCGGGCGGCCTG
CTGCTGCTCTGGATCGGCGCGAAGCTGCTGGTGCCCGACGACGCCGCGCACGACGGCATCCAGGGCGCGGACCGGCTGTG
GGCCGCGGTGCGCACCATCATCGTGGCCGACGCGGTGATGAGCATCGACAACGTGATCGCGATCGCGGGCGCCGCCGAGC
GCGCCGACCCGGAGCATCGGCTCGCGCTCGTGATCTTCGGCCTGGTGGTCAGCATCCCGGTGATCGTCTGGGGCAGCACG
CTGGTATTGAAACTGCTCGACCGTTTCCCGGTGATCGTGATGCTCGGCGCGGCGCTGCTCGGCTGGATCGCGGGCGGGCT
GATCATCGCCGACCCCGCGCTCGACCGCTGGCCGCAGCTCGACGCGCCCGCCGCCGGATATGGCGCGAGCATCGCCGGGG
CGATCCTGGTGGTGGTGGCCGGCATGGCGTGGAAGCGGCGCCGCCGCCCGGCCGGCGCGCATTGA

Upstream 100 bases:

>100_bases
CGCGCCTCGAGCGCGCCCGGCTTCGCGCCACGCCCCGCCGCCGGCACCAGCCGTTCGCCCGCGTCTGTTCCCATCTTCTT
CTTTGCTGCCATTCCTGCCG

Downstream 100 bases:

>100_bases
GGGGCGGCCTCGCCGCCTCGGCCCGACGCGGCCGCGGCGGGCGAGGGCGATGCGCGCGTGCTTGCCCCGGCCGCGACCCT
GGCCGTCCGGCCGACTGCCC

Product: Integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVVLITFAVLLLDIPFLKLAGGL
LLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVMSIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGST
LVLKLLDRFPVIVMLGAALLGWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH

Sequences:

>Translated_234_residues
MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVVLITFAVLLLDIPFLKLAGGL
LLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVMSIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGST
LVLKLLDRFPVIVMLGAALLGWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH
>Mature_234_residues
MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVVLITFAVLLLDIPFLKLAGGL
LLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVMSIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGST
LVLKLLDRFPVIVMLGAALLGWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022301 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 24685; Mature: 24685

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVV
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LITFAVLLLDIPFLKLAGGLLLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVM
HHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGSTLVLKLLDRFPVIVMLGAALL
HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH
HHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIEFLATLHWGAVLQIVVIDLLLGGDNAVVIALACRNLPDSQRLRGVIWGTVGAIVLRVV
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LITFAVLLLDIPFLKLAGGLLLLWIGAKLLVPDDAAHDGIQGADRLWAAVRTIIVADAVM
HHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SIDNVIAIAGAAERADPEHRLALVIFGLVVSIPVIVWGSTLVLKLLDRFPVIVMLGAALL
HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWIAGGLIIADPALDRWPQLDAPAAGYGASIAGAILVVVAGMAWKRRRRPAGAH
HHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]