| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is trg [C]
Identifier: 238028424
GI number: 238028424
Start: 3271809
End: 3272549
Strand: Reverse
Name: trg [C]
Synonym: bglu_1g28880
Alternate gene names: 238028424
Gene position: 3272549-3271809 (Counterclockwise)
Preceding gene: 238028425
Following gene: 238028423
Centisome position: 83.77
GC content: 72.6
Gene sequence:
>741_bases ATGTCGATGACGGGTGGACTCTGGGCAGCAGGGCTGGGGGTGGTCGCGATCGCGGCCGTCGTATTCGGCTGCGTCATGTA TCTGCGCGCGACGCGCGCGCTGGCCGAGGTGGGCCGGCTCGAGGCCGGGCAGGCGGCGGCCGAGGCGCATGCCGCGGCGG CGCAGGCCGACTGGGCGGCGCGCAGCGCCGACCAGGCCCGGCAGGCGGCCGCGCGCGAGCACGCGCTCGACGCCTCGCTC GAGCAGGCGAGCGCGCAGATCGCCGCGGCGCGTGCCTCGCTCGCGAAGGCCGAGGGCGAGCGCGACGCCGCGCATGCACT GGCCGGGCGGATCGCCACCGAGGCGGCGCGGCTGCGCGGCCTGGCCGGCACGTTCGAGCGCTGGCACGAGCAGATGATCT CGCTGATGACGCAGAACCAGGACATGCATGCGAAGAATCGCGAGCTTTCGTCGATCGTCGCGCACGTGCTGATCGTCTCG CTGAACGCCTCGATCGAGGCCGCGCGCGCCGGCACGGCGGGGCGCGGCTTCTCGATCGTGGCCAGCGAGGTGCGCTCGCT CGCCTCGCGCTCGCAGGAGCTTTCCAAGAGCTACCAGAACAGCCTGGACCGCAACGACCTGGTGACCGCCGCCACGTTCC AGGACATCCAGGCGGGCGGCAAGATGATCACCGCCTCGCTCGGCAACGTCGACCTGCTGGCCACCCAGTTGCGCGACCGG CTCGAACGGAGCGAATCGTGA
Upstream 100 bases:
>100_bases AGCCTGCCGGACCACTACGCCGTCGACAGCGTCGGCATCGAGGTCGCGAGCGCCGAGGCAGCGGCACGCGACGACCAGGC GATCGATCGGGCGTAACGCG
Downstream 100 bases:
>100_bases TCGGCGCGAACGCGCGCGAGAGCTTCGAGCGGATCTTCTTCGGCGCGGCGCAGGCGCGGCTCGCGACCGACGGCGTCTGC GAGATCACGCCGCGCGAGGC
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Protein; Chemotaxis Protein Histidine Kinase; Chemotaxis Sensory Transducer
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSMTGGLWAAGLGVVAIAAVVFGCVMYLRATRALAEVGRLEAGQAAAEAHAAAAQADWAARSADQARQAAAREHALDASL EQASAQIAAARASLAKAEGERDAAHALAGRIATEAARLRGLAGTFERWHEQMISLMTQNQDMHAKNRELSSIVAHVLIVS LNASIEAARAGTAGRGFSIVASEVRSLASRSQELSKSYQNSLDRNDLVTAATFQDIQAGGKMITASLGNVDLLATQLRDR LERSES
Sequences:
>Translated_246_residues MSMTGGLWAAGLGVVAIAAVVFGCVMYLRATRALAEVGRLEAGQAAAEAHAAAAQADWAARSADQARQAAAREHALDASL EQASAQIAAARASLAKAEGERDAAHALAGRIATEAARLRGLAGTFERWHEQMISLMTQNQDMHAKNRELSSIVAHVLIVS LNASIEAARAGTAGRGFSIVASEVRSLASRSQELSKSYQNSLDRNDLVTAATFQDIQAGGKMITASLGNVDLLATQLRDR LERSES >Mature_245_residues SMTGGLWAAGLGVVAIAAVVFGCVMYLRATRALAEVGRLEAGQAAAEAHAAAAQADWAARSADQARQAAAREHALDASLE QASAQIAAARASLAKAEGERDAAHALAGRIATEAARLRGLAGTFERWHEQMISLMTQNQDMHAKNRELSSIVAHVLIVSL NASIEAARAGTAGRGFSIVASEVRSLASRSQELSKSYQNSLDRNDLVTAATFQDIQAGGKMITASLGNVDLLATQLRDRL ERSES
Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25821; Mature: 25690
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTGGLWAAGLGVVAIAAVVFGCVMYLRATRALAEVGRLEAGQAAAEAHAAAAQADWAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RSADQARQAAAREHALDASLEQASAQIAAARASLAKAEGERDAAHALAGRIATEAARLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LAGTFERWHEQMISLMTQNQDMHAKNRELSSIVAHVLIVSLNASIEAARAGTAGRGFSIV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHH ASEVRSLASRSQELSKSYQNSLDRNDLVTAATFQDIQAGGKMITASLGNVDLLATQLRDR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH LERSES HHHCCC >Mature Secondary Structure SMTGGLWAAGLGVVAIAAVVFGCVMYLRATRALAEVGRLEAGQAAAEAHAAAAQADWAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RSADQARQAAAREHALDASLEQASAQIAAARASLAKAEGERDAAHALAGRIATEAARLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LAGTFERWHEQMISLMTQNQDMHAKNRELSSIVAHVLIVSLNASIEAARAGTAGRGFSIV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHH ASEVRSLASRSQELSKSYQNSLDRNDLVTAATFQDIQAGGKMITASLGNVDLLATQLRDR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH LERSES HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA