| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ribF [H]
Identifier: 238028412
GI number: 238028412
Start: 3258222
End: 3259217
Strand: Direct
Name: ribF [H]
Synonym: bglu_1g28760
Alternate gene names: 238028412
Gene position: 3258222-3259217 (Clockwise)
Preceding gene: 238028406
Following gene: 238028413
Centisome position: 83.4
GC content: 71.49
Gene sequence:
>996_bases CTGCCACCCGCTATCGTGAAAGTCTTTCGCGGCCTGCCCAACGCCGAGAGCCGCGCCCCGTGCGCGCTCACGATCGGCAA CTTCGACGGTGTCCATCGCGGCCATCAGGCGCTGCTCGCGCGCGTGCGCGCGGCGGCGGACGCGCGCGGGCTGCCGGTCT GCGTCATGACGTTCGAGCCGCATCCCCGCGAATTCTTCAACCCGGCCGGCGCGCCGCCGCGCATCGCGATGCTGCGCGAC AAGCTCGAGGCGCTGCGCGAGAACGGCGTCGATCGGGTGGTCGTCGAGCATTTCAACCACACGTTCGCGAACCAGCCGCC CGAGGCGTTCGTCGAGCAGACGCTCGTGAACGGCCTGCACGCCCGCTGGATGATGGTCGGCGACGATTTCTGCTACGGCG CGAGGCGCGCCGGCAATTTCGCCTCGCTGCGCGAGGCGGGACGGCGCTACGGCTTCGACGTCGAGCAGATGGCCACGCTC ACTGCGCCGAACGGCACGCGCATCTCGAGCTCGGGCGTGCGCGCCTCGCTCGCCGCGGGCGACCTCGAGGCGGCCAAGGC CGCGCTCGGCCACGGCTACGCGATCAGCGGCCACGTCACGCACGGGCTCAAGCTCGGCCGCGACCTCGGCTTCCCGACCC TGAACCTGCCGATCGCGCACAAGCGGCCCGCGCTGTCCGGCATCTTCGTGGTGCTGGTGCACGGACTGGCCGGCCACCCG CTGCCGGCCGTGGCGAGCCTCGGCGTGCGCCCGACCGTGATGGACGCGGGCCGCGTGCTGCTGGAAGCGCACGTGCTCGA CTGGCACGGCGACGCCTACGGCAAGATCGTGCGCGTCGAGTTCCTGAAGAAGCTGCGCGACGAGGCCAAGTACAGCGACC TGGAAACGCTGACGCGCGCGATCGCGCAGGACGTCGCCGACACGCGCGCCTATTTCGCCGCGCACGGCGGCCGCGGGACC GGCTTCGCGATCTCCGCCACCGACCGAATTAGCTGA
Upstream 100 bases:
>100_bases TTTACCATTCGGGATGGCGGTTTCCCGCCGCCCGAGCCGCCGCGCCGCCCGAACGTTTATAATCTTGCGTTTTGCGGCAT CCGCCCGCACCACTCGCCCG
Downstream 100 bases:
>100_bases TCCGCCCCGGGCGCTGCACGCATGTGCCGCGCCGCCCCGGCGCCGGCCTCCCCGATTTCACGACGCGCGAGCGTCACCGA GAAGAGATAGCGACTCCCGA
Product: bifunctional riboflavin kinase/FMN adenylyltransferase
Products: NA
Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MPPAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREFFNPAGAPPRIAMLRD KLEALRENGVDRVVVEHFNHTFANQPPEAFVEQTLVNGLHARWMMVGDDFCYGARRAGNFASLREAGRRYGFDVEQMATL TAPNGTRISSSGVRASLAAGDLEAAKAALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVLVHGLAGHP LPAVASLGVRPTVMDAGRVLLEAHVLDWHGDAYGKIVRVEFLKKLRDEAKYSDLETLTRAIAQDVADTRAYFAAHGGRGT GFAISATDRIS
Sequences:
>Translated_331_residues MPPAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREFFNPAGAPPRIAMLRD KLEALRENGVDRVVVEHFNHTFANQPPEAFVEQTLVNGLHARWMMVGDDFCYGARRAGNFASLREAGRRYGFDVEQMATL TAPNGTRISSSGVRASLAAGDLEAAKAALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVLVHGLAGHP LPAVASLGVRPTVMDAGRVLLEAHVLDWHGDAYGKIVRVEFLKKLRDEAKYSDLETLTRAIAQDVADTRAYFAAHGGRGT GFAISATDRIS >Mature_330_residues PPAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREFFNPAGAPPRIAMLRDK LEALRENGVDRVVVEHFNHTFANQPPEAFVEQTLVNGLHARWMMVGDDFCYGARRAGNFASLREAGRRYGFDVEQMATLT APNGTRISSSGVRASLAAGDLEAAKAALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVLVHGLAGHPL PAVASLGVRPTVMDAGRVLLEAHVLDWHGDAYGKIVRVEFLKKLRDEAKYSDLETLTRAIAQDVADTRAYFAAHGGRGTG FAISATDRIS
Specific function: Unknown
COG id: COG0196
COG function: function code H; FAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribF family [H]
Homologues:
Organism=Escherichia coli, GI1786208, Length=311, Percent_Identity=45.6591639871383, Blast_Score=254, Evalue=5e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR015864 - InterPro: IPR015865 - InterPro: IPR002606 - InterPro: IPR014729 [H]
Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]
EC number: =2.7.1.26; =2.7.7.2 [H]
Molecular weight: Translated: 35611; Mature: 35480
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEP CCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC HPREFFNPAGAPPRIAMLRDKLEALRENGVDRVVVEHFNHTFANQPPEAFVEQTLVNGLH CCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ARWMMVGDDFCYGARRAGNFASLREAGRRYGFDVEQMATLTAPNGTRISSSGVRASLAAG HEEEEECCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHEEECCCCCEECCCCCEEEHHHC DLEAAKAALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVLVHGLAGHP HHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCC LPAVASLGVRPTVMDAGRVLLEAHVLDWHGDAYGKIVRVEFLKKLRDEAKYSDLETLTRA HHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH IAQDVADTRAYFAAHGGRGTGFAISATDRIS HHHHHHHHHHHHHCCCCCCCCEEEECCCCCC >Mature Secondary Structure PPAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEP CHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC HPREFFNPAGAPPRIAMLRDKLEALRENGVDRVVVEHFNHTFANQPPEAFVEQTLVNGLH CCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ARWMMVGDDFCYGARRAGNFASLREAGRRYGFDVEQMATLTAPNGTRISSSGVRASLAAG HEEEEECCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHEEECCCCCEECCCCCEEEHHHC DLEAAKAALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVLVHGLAGHP HHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCC LPAVASLGVRPTVMDAGRVLLEAHVLDWHGDAYGKIVRVEFLKKLRDEAKYSDLETLTRA HHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH IAQDVADTRAYFAAHGGRGTGFAISATDRIS HHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]