| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is nadA [H]
Identifier: 238028408
GI number: 238028408
Start: 3253221
End: 3254348
Strand: Reverse
Name: nadA [H]
Synonym: bglu_1g28720
Alternate gene names: 238028408
Gene position: 3254348-3253221 (Counterclockwise)
Preceding gene: 238028409
Following gene: 238028407
Centisome position: 83.31
GC content: 68.71
Gene sequence:
>1128_bases ATGCAAGCGGCGATCAAACCCGTCGAATACGACCGGCCGGGCGCTACCTGCGGCATCGGGCAGGCGTGGGCGAAGGTGCC CGACAGCCCGTCGGCGACGGAGCGCGACGTGCTGAAGGCGCGAATCAGGGCGCTGCTGGCGCGCGAGAAGGCCGTGCTCG TCGCGCACTATTACGTCGATGCGGAACTGCAGGAACTGGCCGACGAGACCGGCGGCTGCGTGGCCGACTCGCTCGAGATG GCGCGCTTCGGCCGCGATCACGACGCGCAAACGCTGATCGTGGCCGGCGTGCGCTTCATGGGCGAGACGGCCAAGATCCT GAGCCCGGGCAAGCGCATCCTGATGCCCGATCTCGACGCCACCTGCTCGCTCGATCTCGGTTGCCCGGCCGACGAATTCT CGGCGTTCTGCGACGCGCATCCGGAGCGCAAGGTGGTGGTCTACGCCAACACCAGTGCCGCCGTGAAGGCGCGCGCGGAC TGGATGGTCACCTCGTCGATCGGCCTCGAGATCGTCGCCGACCTGCATGCGCGCGGCGAGAAGCTGATCTGGGCGCCGGA CCGGCACCTGGGCAACTACATCCAGAAGAAGACCGGTGCGGACATGCTGATGTGGCAGGGCTCGTGCCTCGTCCACGACG AATTCAAGGGCATCGAGCTCGACCTGCTGCGCGCCCAGTATCCCGACGCGAAGGTGCTCGTGCACCCGGAATCGCCCGAG GGCGTGGTCGCGCTCGCCGACGTGGTCGGCTCGACCACGCAGTTGATCGACGCGGCGGTCAGGCTCGACGCGCAGCGCTT CATCGTCGCGACCGATCTCGGCATCCTGCACAAGATGCGCCTCGCGGCGCCGGGCAAGACCTTCATCGAGGCGCCCACGG CCGGCAACAGCGCGACCTGCAAGAGCTGCGCGCATTGCCCGTGGATGGCGATGAACGGCCTCGCGAACCTGGCCGACGTG CTCGAGCGCGGCCACAACGAGATTTACGTCGATCCGGCGCTCGGCCTGCGTGCGCGCGTGCCGATCGACCGCATGCTCGC GTTCGCCGCCGAGCACAAGCGGCGCGTGCAGGCCAGCGGCGACCTGCAGCGCGATGCGAGCCTGTTCTCGAACGTGGGGG CGGCATGA
Upstream 100 bases:
>100_bases ATTAGAATTTCGGTACGTCACAAACCCCGCGCTGGCGGGGTTTTTTCTTTTGTGCCGCCGGTTTCACGGCGGCCGATCGG CAGGGCAGAGGAGAAGGAAG
Downstream 100 bases:
>100_bases CGGCGGTCTCCGCGATCTACGGCGAGATCGTCGCCGAATACGGCGCGGCCTTCGAGGCCGCGATCGCGCGCAATGTCGCC GATGCGATTGCCGAGGACGT
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MQAAIKPVEYDRPGATCGIGQAWAKVPDSPSATERDVLKARIRALLAREKAVLVAHYYVDAELQELADETGGCVADSLEM ARFGRDHDAQTLIVAGVRFMGETAKILSPGKRILMPDLDATCSLDLGCPADEFSAFCDAHPERKVVVYANTSAAVKARAD WMVTSSIGLEIVADLHARGEKLIWAPDRHLGNYIQKKTGADMLMWQGSCLVHDEFKGIELDLLRAQYPDAKVLVHPESPE GVVALADVVGSTTQLIDAAVRLDAQRFIVATDLGILHKMRLAAPGKTFIEAPTAGNSATCKSCAHCPWMAMNGLANLADV LERGHNEIYVDPALGLRARVPIDRMLAFAAEHKRRVQASGDLQRDASLFSNVGAA
Sequences:
>Translated_375_residues MQAAIKPVEYDRPGATCGIGQAWAKVPDSPSATERDVLKARIRALLAREKAVLVAHYYVDAELQELADETGGCVADSLEM ARFGRDHDAQTLIVAGVRFMGETAKILSPGKRILMPDLDATCSLDLGCPADEFSAFCDAHPERKVVVYANTSAAVKARAD WMVTSSIGLEIVADLHARGEKLIWAPDRHLGNYIQKKTGADMLMWQGSCLVHDEFKGIELDLLRAQYPDAKVLVHPESPE GVVALADVVGSTTQLIDAAVRLDAQRFIVATDLGILHKMRLAAPGKTFIEAPTAGNSATCKSCAHCPWMAMNGLANLADV LERGHNEIYVDPALGLRARVPIDRMLAFAAEHKRRVQASGDLQRDASLFSNVGAA >Mature_375_residues MQAAIKPVEYDRPGATCGIGQAWAKVPDSPSATERDVLKARIRALLAREKAVLVAHYYVDAELQELADETGGCVADSLEM ARFGRDHDAQTLIVAGVRFMGETAKILSPGKRILMPDLDATCSLDLGCPADEFSAFCDAHPERKVVVYANTSAAVKARAD WMVTSSIGLEIVADLHARGEKLIWAPDRHLGNYIQKKTGADMLMWQGSCLVHDEFKGIELDLLRAQYPDAKVLVHPESPE GVVALADVVGSTTQLIDAAVRLDAQRFIVATDLGILHKMRLAAPGKTFIEAPTAGNSATCKSCAHCPWMAMNGLANLADV LERGHNEIYVDPALGLRARVPIDRMLAFAAEHKRRVQASGDLQRDASLFSNVGAA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=326, Percent_Identity=63.8036809815951, Blast_Score=435, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 40520; Mature: 40520
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAAIKPVEYDRPGATCGIGQAWAKVPDSPSATERDVLKARIRALLAREKAVLVAHYYVD CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEC AELQELADETGGCVADSLEMARFGRDHDAQTLIVAGVRFMGETAKILSPGKRILMPDLDA HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCHHHHHCCCCEEECCCCCC TCSLDLGCPADEFSAFCDAHPERKVVVYANTSAAVKARADWMVTSSIGLEIVADLHARGE CEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEECCCCHHEEEHHHCCCC KLIWAPDRHLGNYIQKKTGADMLMWQGSCLVHDEFKGIELDLLRAQYPDAKVLVHPESPE EEEECCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCEEEEEECCCCCCEEEECCCCCC GVVALADVVGSTTQLIDAAVRLDAQRFIVATDLGILHKMRLAAPGKTFIEAPTAGNSATC CEEEEHHHHCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEECCCCCCCCCH KSCAHCPWMAMNGLANLADVLERGHNEIYVDPALGLRARVPIDRMLAFAAEHKRRVQASG HHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCC DLQRDASLFSNVGAA CHHHHHHHHHHCCCC >Mature Secondary Structure MQAAIKPVEYDRPGATCGIGQAWAKVPDSPSATERDVLKARIRALLAREKAVLVAHYYVD CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEC AELQELADETGGCVADSLEMARFGRDHDAQTLIVAGVRFMGETAKILSPGKRILMPDLDA HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCHHHHHCCCCEEECCCCCC TCSLDLGCPADEFSAFCDAHPERKVVVYANTSAAVKARADWMVTSSIGLEIVADLHARGE CEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEECCCCHHEEEHHHCCCC KLIWAPDRHLGNYIQKKTGADMLMWQGSCLVHDEFKGIELDLLRAQYPDAKVLVHPESPE EEEECCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCEEEEEECCCCCCEEEECCCCCC GVVALADVVGSTTQLIDAAVRLDAQRFIVATDLGILHKMRLAAPGKTFIEAPTAGNSATC CEEEEHHHHCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEECCCCCCCCCH KSCAHCPWMAMNGLANLADVLERGHNEIYVDPALGLRARVPIDRMLAFAAEHKRRVQASG HHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCC DLQRDASLFSNVGAA CHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA