| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pepA [H]
Identifier: 238028369
GI number: 238028369
Start: 3210313
End: 3211824
Strand: Reverse
Name: pepA [H]
Synonym: bglu_1g28300
Alternate gene names: 238028369
Gene position: 3211824-3210313 (Counterclockwise)
Preceding gene: 339905977
Following gene: 238028368
Centisome position: 82.22
GC content: 68.19
Gene sequence:
>1512_bases ATGGACTTTAGCATAAAAGGCTTTGATTGGAGCAAAGGTGCTGCCAAGGGGTTCCTGACCGGAAAATCCGACTGCGTCGT GATCGGCGTGTTCGAATCCCAAACGCTGTCCGGCGCCGCGCTCGACACGGATGAAGCCACCAAGGGGCTGCTGTCGCGGA TCATCAAGGCCGGCGACATGGACGGCAAGGCCGGCAAGACCCTGCTGCTGCACGAAGTGTCGGGCATCGGCGCCTCGCGC GTGCTGCTCGTCGGCCTCGGCAAGCAGGACGGCTTCGGCCAGAAGGCTTACCAGGAGGCCGTCCGCGCCGCCTGGCGCGC GCTGCTCGCGACCAAGGTCGGGCAGGTCGCGTTCACGCTCACGCAGTTGCCCGTCGCCGAGCGCGCGTCCGACTGGTGCG TGCGTGCCGCGATTCTCGCGCTGCGCAACGAAACCTACCGCTTCACGCAGATGAAGAGCAAGGCCGAGCCCGAGCCGGCC ACGCTCAAGCGCGTCGTGTTCAGCGTCGATCCGGCCGAGGAGAAGGCCGCCAAGCTGGCCGTGAAGCAGGCCGTGGCGAT CGCCAACGGCATCGATTTCACGCGCGATCTCGGCAACCTGCCCGCCAACGTCTGCACGCCCACCTATCTTGCGAACTCGG CCCGGCAGATGGCTAAGGACTGGAATCTCAGGTCCGAGGTGCTCGGCCTGAAGCAGATCCAGGCGCTGAAGATGGAGTCG TTCCTGGCGGTCGCGCGCGGCTCGGTCGAGCCGCCGCAGTTCATCGTGCTGCACTACCAGGGCGGGCCGGCCAAGGCGGC GCCGATCGTGCTGGTCGGCAAGGGCATCACGTTCGACACGGGCGGCATCTCGCTGAAGCCGGGCGAGGGCATGGACGAGA TGAAGTACGACATGTGCGGCGCCGGCTCGGTGCTCGGCACGATGCGCGCCGTGGCCGAAATGGGGCTCAAGCTCAACGTC GTCGCGATCGTGCCGACCTGCGAGAACATGCCGGCGGGCAACGCGCTGAAGCCGGGCGACATCGTCACGAGCATGAAGGG GCTGACGATCGAGGTGCTCAATACCGACGCCGAGGGCCGCCTGATCCTCTGCGACGCGCTCACCTACGCCGAGCGCTTCA AGCCGGCCGCCGTGATCGACGTCGCGACGCTGACGGGCGCCTGCGTCGTCGCGCTCGGCCACCACCACAGCGGCCTGTTC TCGAAGGACGACGCGCTGGCGGGCGAGCTGCTCGACGCCTCGCGCGAGGCCGGCGATCCGGCCTGGCGTCTGCCGCTCGA CGACGAGTATCAGGAGCAGCTGAAGTCGAATTTCGCCGACCTGACGAATCTCGGCGGGCGTCCGGGCGGCAGCGTGACGG CGGCGTGCTTCCTGTCGCGTTTCGCCGAGGCTTACCCATGGGCGCACCTCGACATCGCCGGCACCGCCTGGAAGAGCGGC GCGGCGAAGGGGGCCACCGGCCGGCCGGTGCCGCTCCTGACGCAGTTCCTGATCGACCGCGCCGGCGCGTGA
Upstream 100 bases:
>100_bases GAAGAGGGCGGGAGGGGGTGGGGCGCGCGCCGCCAGGGAAAAAATAGCGGATAATTGCGGCTTTCACCCTTAGCCCAGAT TTTATCCGAGGACAAGCGCG
Downstream 100 bases:
>100_bases GCGGCGCGGCGACGACGCAGCGGTGCGCGTGATGACGCGGATCGATTTCCACTCGAACGTCGGCGATTCGCTGGCGTATG CGTGCCGGCTGCTGCGCAAG
Product: multifunctional aminopeptidase A
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MDFSIKGFDWSKGAAKGFLTGKSDCVVIGVFESQTLSGAALDTDEATKGLLSRIIKAGDMDGKAGKTLLLHEVSGIGASR VLLVGLGKQDGFGQKAYQEAVRAAWRALLATKVGQVAFTLTQLPVAERASDWCVRAAILALRNETYRFTQMKSKAEPEPA TLKRVVFSVDPAEEKAAKLAVKQAVAIANGIDFTRDLGNLPANVCTPTYLANSARQMAKDWNLRSEVLGLKQIQALKMES FLAVARGSVEPPQFIVLHYQGGPAKAAPIVLVGKGITFDTGGISLKPGEGMDEMKYDMCGAGSVLGTMRAVAEMGLKLNV VAIVPTCENMPAGNALKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDVATLTGACVVALGHHHSGLF SKDDALAGELLDASREAGDPAWRLPLDDEYQEQLKSNFADLTNLGGRPGGSVTAACFLSRFAEAYPWAHLDIAGTAWKSG AAKGATGRPVPLLTQFLIDRAGA
Sequences:
>Translated_503_residues MDFSIKGFDWSKGAAKGFLTGKSDCVVIGVFESQTLSGAALDTDEATKGLLSRIIKAGDMDGKAGKTLLLHEVSGIGASR VLLVGLGKQDGFGQKAYQEAVRAAWRALLATKVGQVAFTLTQLPVAERASDWCVRAAILALRNETYRFTQMKSKAEPEPA TLKRVVFSVDPAEEKAAKLAVKQAVAIANGIDFTRDLGNLPANVCTPTYLANSARQMAKDWNLRSEVLGLKQIQALKMES FLAVARGSVEPPQFIVLHYQGGPAKAAPIVLVGKGITFDTGGISLKPGEGMDEMKYDMCGAGSVLGTMRAVAEMGLKLNV VAIVPTCENMPAGNALKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDVATLTGACVVALGHHHSGLF SKDDALAGELLDASREAGDPAWRLPLDDEYQEQLKSNFADLTNLGGRPGGSVTAACFLSRFAEAYPWAHLDIAGTAWKSG AAKGATGRPVPLLTQFLIDRAGA >Mature_503_residues MDFSIKGFDWSKGAAKGFLTGKSDCVVIGVFESQTLSGAALDTDEATKGLLSRIIKAGDMDGKAGKTLLLHEVSGIGASR VLLVGLGKQDGFGQKAYQEAVRAAWRALLATKVGQVAFTLTQLPVAERASDWCVRAAILALRNETYRFTQMKSKAEPEPA TLKRVVFSVDPAEEKAAKLAVKQAVAIANGIDFTRDLGNLPANVCTPTYLANSARQMAKDWNLRSEVLGLKQIQALKMES FLAVARGSVEPPQFIVLHYQGGPAKAAPIVLVGKGITFDTGGISLKPGEGMDEMKYDMCGAGSVLGTMRAVAEMGLKLNV VAIVPTCENMPAGNALKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDVATLTGACVVALGHHHSGLF SKDDALAGELLDASREAGDPAWRLPLDDEYQEQLKSNFADLTNLGGRPGGSVTAACFLSRFAEAYPWAHLDIAGTAWKSG AAKGATGRPVPLLTQFLIDRAGA
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=495, Percent_Identity=36.969696969697, Blast_Score=269, Evalue=6e-72, Organism=Homo sapiens, GI47155554, Length=313, Percent_Identity=32.2683706070287, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1790710, Length=507, Percent_Identity=51.4792899408284, Blast_Score=517, Evalue=1e-148, Organism=Escherichia coli, GI87082123, Length=351, Percent_Identity=39.6011396011396, Blast_Score=214, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17556903, Length=312, Percent_Identity=34.2948717948718, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17565172, Length=460, Percent_Identity=26.7391304347826, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI20129969, Length=523, Percent_Identity=31.5487571701721, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24662227, Length=509, Percent_Identity=30.2554027504912, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI21355725, Length=313, Percent_Identity=37.6996805111821, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24661038, Length=313, Percent_Identity=37.3801916932907, Blast_Score=209, Evalue=5e-54, Organism=Drosophila melanogaster, GI161077148, Length=499, Percent_Identity=31.4629258517034, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI20130057, Length=499, Percent_Identity=31.4629258517034, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI21355645, Length=495, Percent_Identity=30.1010101010101, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI24662223, Length=495, Percent_Identity=30.1010101010101, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI20129963, Length=499, Percent_Identity=29.0581162324649, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI19922386, Length=323, Percent_Identity=33.7461300309598, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI21357381, Length=312, Percent_Identity=32.6923076923077, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI221379063, Length=312, Percent_Identity=32.6923076923077, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI221379062, Length=312, Percent_Identity=32.6923076923077, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24646701, Length=316, Percent_Identity=27.2151898734177, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24646703, Length=316, Percent_Identity=27.2151898734177, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI21358201, Length=316, Percent_Identity=27.2151898734177, Blast_Score=82, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 53182; Mature: 53182
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSIKGFDWSKGAAKGFLTGKSDCVVIGVFESQTLSGAALDTDEATKGLLSRIIKAGDM CCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC DGKAGKTLLLHEVSGIGASRVLLVGLGKQDGFGQKAYQEAVRAAWRALLATKVGQVAFTL CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQLPVAERASDWCVRAAILALRNETYRFTQMKSKAEPEPATLKRVVFSVDPAEEKAAKLA HHCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCHHHHHHHHEECCCHHHHHHHHH VKQAVAIANGIDFTRDLGNLPANVCTPTYLANSARQMAKDWNLRSEVLGLKQIQALKMES HHHHHHHHCCCHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FLAVARGSVEPPQFIVLHYQGGPAKAAPIVLVGKGITFDTGGISLKPGEGMDEMKYDMCG HHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHHHCC AGSVLGTMRAVAEMGLKLNVVAIVPTCENMPAGNALKPGDIVTSMKGLTIEVLNTDAEGR CCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC LILCDALTYAERFKPAAVIDVATLTGACVVALGHHHSGLFSKDDALAGELLDASREAGDP EEEEEHHHHHHHCCCCCEEEHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC AWRLPLDDEYQEQLKSNFADLTNLGGRPGGSVTAACFLSRFAEAYPWAHLDIAGTAWKSG EEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC AAKGATGRPVPLLTQFLIDRAGA CCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDFSIKGFDWSKGAAKGFLTGKSDCVVIGVFESQTLSGAALDTDEATKGLLSRIIKAGDM CCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC DGKAGKTLLLHEVSGIGASRVLLVGLGKQDGFGQKAYQEAVRAAWRALLATKVGQVAFTL CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQLPVAERASDWCVRAAILALRNETYRFTQMKSKAEPEPATLKRVVFSVDPAEEKAAKLA HHCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCHHHHHHHHEECCCHHHHHHHHH VKQAVAIANGIDFTRDLGNLPANVCTPTYLANSARQMAKDWNLRSEVLGLKQIQALKMES HHHHHHHHCCCHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FLAVARGSVEPPQFIVLHYQGGPAKAAPIVLVGKGITFDTGGISLKPGEGMDEMKYDMCG HHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHHHCC AGSVLGTMRAVAEMGLKLNVVAIVPTCENMPAGNALKPGDIVTSMKGLTIEVLNTDAEGR CCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC LILCDALTYAERFKPAAVIDVATLTGACVVALGHHHSGLFSKDDALAGELLDASREAGDP EEEEEHHHHHHHCCCCCEEEHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC AWRLPLDDEYQEQLKSNFADLTNLGGRPGGSVTAACFLSRFAEAYPWAHLDIAGTAWKSG EEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC AAKGATGRPVPLLTQFLIDRAGA CCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA