| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hutU [H]
Identifier: 238028068
GI number: 238028068
Start: 2864997
End: 2866685
Strand: Reverse
Name: hutU [H]
Synonym: bglu_1g25190
Alternate gene names: 238028068
Gene position: 2866685-2864997 (Counterclockwise)
Preceding gene: 238028069
Following gene: 238028067
Centisome position: 73.38
GC content: 69.09
Gene sequence:
>1689_bases ATGAACCATCCGAACCACATCGATCCGCGTCTGGACCCGACGCGCGTGATCCGCGCGCCGCGCGGTGCCGAGAAGACCTG CAAGACCTGGCTGGCCGAGGCCGCCTACCGGATGCTGCAGAACAACCTCGACGCCGAGGTGGCCGAGCATCCGCACGCGC TGGTGGTGTACGGCGGCATCGGCCGCGCCGCGCGCGACTGGGCATGCTTCGACCAGATCCTCGCCTCGCTGAAGGCGCTC GAGGAGAACGAAACGCTGCTGATCCAGTCGGGCAAGCCGGTCGGCGTGTTCCGCACCCATCCCGACGCGCCGCGCGTACT GCTGGCGAACTCGAACCTGGTGCCGCACTGGGCCAACTGGGACCACTTCAACGAACTCGACCGCCAGGGCCTGATGATGT ATGGCCAGATGACGGCGGGCAGCTGGATCTACATCGGCAGCCAGGGGATCGTGCAGGGCACCTACGAAACCTTCTTCTCG GTGGCCAACCAGCATTTCCACGGCGATCCGTCGGGCCGCTGGATCCTGACCGGGGGACTGGGCGGGATGGGCGGCGCGCA GCCGCTCGCGGCCACCATGGCGGGCTTCTCGATGATCGCGGTGGAGTGCGACGAGTCGCGGATCGATTTCCGCCTGAAGA CGCGCTATGTGGACAAGAAGGCGCGCAGCCTGGACGAGGCGCTCGCGCTGCTCGACGAGGCGAAGCGCGGCGGCCGGCCG GTGTCGATCGGCCTCGTCGGCAACGCGGCCGACGTGTTTGCCGAGGTCGTGGCGCGCGGCATCACGCCGGACTGCGTGAC GGACCAGACGAGCGCGCACGATCCGGTGAACGGCTACCTGCCGCAGGGCTGGAGCGTGGCGCAGTGGCAGGAGGCGCGCA AGGTCGATCCGCAGGGCATCGTTGTGCCGGCCAAGCAGTCGATGGCCCGCCAGGTGCAGGCGATGCTGACGCTGCAGCAG CGCGGCGCGGCCACGCTCGACTACGGCAACAACATCCGCCAGATGGCGCTGGAAATGGGCGTGGCCAACGCGTTCGACTT TCCGGGCTTCGTGCCGGCCTATATCCGGCCGCTGTTCTGCGAGGGCAAGGGGCCGTTCCGCTGGGTGGCGCTGTCGGGGG ACCCGGAGGACATCTACAAGACCGACGCGAAGGTCAAGGAGCTGATTCCCGACGATGCGCACCTGCACAACTGGCTCGAC ATGGCGCGCGAGCGGATCGCGTTCCAGGGGCTGCCGGCGCGGATCTGCTGGGTGGGGGTGAAGGATCGCTATCGCCTGGG GCAGGCGTTCAACGAGATGGTGAGGCGCGGCGAGCTGAAGGCGCCGATCGTGATCGGCCGGGACCACCTGGACACGGGGT CGGTGGCGAGCCCGAACCGGGAGACGGAAGCGATGAAGGACGGCTCGGACGCGGTTAGCGACTGGCCGCTGTTGAACGCG CTGCTGAACACGGCGGGCGGGGCGACCTGGGTGTCGCTGCACCACGGCGGCGGGGTGGGGATGGGCTTTTCGCAGCACGC GGGCGTGGTGATCGTGGCGGACGGCAGCGAGGCGGCGCACGAGCGGCTGGGCCGCGTGCTGTTCAACGATCCGGCCACGG GGGTGATGCGCCATGCCGATGCCGGCTATGAACTCGCGCAGCGCACCGCGCGCGAGGCCGGTCTCAAGCTGCCGATGCTG GGGCGTTGA
Upstream 100 bases:
>100_bases GGCCATTTCTGAACCGGCACACCCCGGCCGGCGAGCCTCGCGGCACGCCGGCCGGGGTGGCCGTCACGTATCCCTATATT TCCCTGGAGCGCCGTCGACC
Downstream 100 bases:
>100_bases GCGCCATGTCGATGGGCCTGGCAGCGCGCCTGTCGCTGATCCGCGCGGATCGACTCGTCGCCGCGCCCTGGAAGAACGGC GGCGGCGTGACGCGCGAGAT
Product: urocanate hydratase
Products: NA
Alternate protein names: Urocanase; Imidazolonepropionate hydrolase [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MNHPNHIDPRLDPTRVIRAPRGAEKTCKTWLAEAAYRMLQNNLDAEVAEHPHALVVYGGIGRAARDWACFDQILASLKAL EENETLLIQSGKPVGVFRTHPDAPRVLLANSNLVPHWANWDHFNELDRQGLMMYGQMTAGSWIYIGSQGIVQGTYETFFS VANQHFHGDPSGRWILTGGLGGMGGAQPLAATMAGFSMIAVECDESRIDFRLKTRYVDKKARSLDEALALLDEAKRGGRP VSIGLVGNAADVFAEVVARGITPDCVTDQTSAHDPVNGYLPQGWSVAQWQEARKVDPQGIVVPAKQSMARQVQAMLTLQQ RGAATLDYGNNIRQMALEMGVANAFDFPGFVPAYIRPLFCEGKGPFRWVALSGDPEDIYKTDAKVKELIPDDAHLHNWLD MARERIAFQGLPARICWVGVKDRYRLGQAFNEMVRRGELKAPIVIGRDHLDTGSVASPNRETEAMKDGSDAVSDWPLLNA LLNTAGGATWVSLHHGGGVGMGFSQHAGVVIVADGSEAAHERLGRVLFNDPATGVMRHADAGYELAQRTAREAGLKLPML GR
Sequences:
>Translated_562_residues MNHPNHIDPRLDPTRVIRAPRGAEKTCKTWLAEAAYRMLQNNLDAEVAEHPHALVVYGGIGRAARDWACFDQILASLKAL EENETLLIQSGKPVGVFRTHPDAPRVLLANSNLVPHWANWDHFNELDRQGLMMYGQMTAGSWIYIGSQGIVQGTYETFFS VANQHFHGDPSGRWILTGGLGGMGGAQPLAATMAGFSMIAVECDESRIDFRLKTRYVDKKARSLDEALALLDEAKRGGRP VSIGLVGNAADVFAEVVARGITPDCVTDQTSAHDPVNGYLPQGWSVAQWQEARKVDPQGIVVPAKQSMARQVQAMLTLQQ RGAATLDYGNNIRQMALEMGVANAFDFPGFVPAYIRPLFCEGKGPFRWVALSGDPEDIYKTDAKVKELIPDDAHLHNWLD MARERIAFQGLPARICWVGVKDRYRLGQAFNEMVRRGELKAPIVIGRDHLDTGSVASPNRETEAMKDGSDAVSDWPLLNA LLNTAGGATWVSLHHGGGVGMGFSQHAGVVIVADGSEAAHERLGRVLFNDPATGVMRHADAGYELAQRTAREAGLKLPML GR >Mature_562_residues MNHPNHIDPRLDPTRVIRAPRGAEKTCKTWLAEAAYRMLQNNLDAEVAEHPHALVVYGGIGRAARDWACFDQILASLKAL EENETLLIQSGKPVGVFRTHPDAPRVLLANSNLVPHWANWDHFNELDRQGLMMYGQMTAGSWIYIGSQGIVQGTYETFFS VANQHFHGDPSGRWILTGGLGGMGGAQPLAATMAGFSMIAVECDESRIDFRLKTRYVDKKARSLDEALALLDEAKRGGRP VSIGLVGNAADVFAEVVARGITPDCVTDQTSAHDPVNGYLPQGWSVAQWQEARKVDPQGIVVPAKQSMARQVQAMLTLQQ RGAATLDYGNNIRQMALEMGVANAFDFPGFVPAYIRPLFCEGKGPFRWVALSGDPEDIYKTDAKVKELIPDDAHLHNWLD MARERIAFQGLPARICWVGVKDRYRLGQAFNEMVRRGELKAPIVIGRDHLDTGSVASPNRETEAMKDGSDAVSDWPLLNA LLNTAGGATWVSLHHGGGVGMGFSQHAGVVIVADGSEAAHERLGRVLFNDPATGVMRHADAGYELAQRTAREAGLKLPML GR
Specific function: Unknown
COG id: COG2987
COG function: function code E; Urocanate hydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urocanase family [H]
Homologues:
Organism=Homo sapiens, GI21389467, Length=576, Percent_Identity=34.0277777777778, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI260306182, Length=636, Percent_Identity=30.9748427672956, Blast_Score=268, Evalue=1e-71, Organism=Caenorhabditis elegans, GI71997891, Length=571, Percent_Identity=33.2749562171629, Blast_Score=303, Evalue=2e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000193 [H]
Pfam domain/function: PF01175 Urocanase [H]
EC number: =4.2.1.49 [H]
Molecular weight: Translated: 61407; Mature: 61407
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS01233 UROCANASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPNHIDPRLDPTRVIRAPRGAEKTCKTWLAEAAYRMLQNNLDAEVAEHPHALVVYGGI CCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCC GRAARDWACFDQILASLKALEENETLLIQSGKPVGVFRTHPDAPRVLLANSNLVPHWANW CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCC DHFNELDRQGLMMYGQMTAGSWIYIGSQGIVQGTYETFFSVANQHFHGDPSGRWILTGGL CHHHHHHHCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC GGMGGAQPLAATMAGFSMIAVECDESRIDFRLKTRYVDKKARSLDEALALLDEAKRGGRP CCCCCCCHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCE VSIGLVGNAADVFAEVVARGITPDCVTDQTSAHDPVNGYLPQGWSVAQWQEARKVDPQGI EEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCE VVPAKQSMARQVQAMLTLQQRGAATLDYGNNIRQMALEMGVANAFDFPGFVPAYIRPLFC EECCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCEEEE EGKGPFRWVALSGDPEDIYKTDAKVKELIPDDAHLHNWLDMARERIAFQGLPARICWVGV CCCCCEEEEEECCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC KDRYRLGQAFNEMVRRGELKAPIVIGRDHLDTGSVASPNRETEAMKDGSDAVSDWPLLNA HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHH LLNTAGGATWVSLHHGGGVGMGFSQHAGVVIVADGSEAAHERLGRVLFNDPATGVMRHAD HHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCHHEECCCCHHHHHHCC AGYELAQRTAREAGLKLPMLGR CCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNHPNHIDPRLDPTRVIRAPRGAEKTCKTWLAEAAYRMLQNNLDAEVAEHPHALVVYGGI CCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCC GRAARDWACFDQILASLKALEENETLLIQSGKPVGVFRTHPDAPRVLLANSNLVPHWANW CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCC DHFNELDRQGLMMYGQMTAGSWIYIGSQGIVQGTYETFFSVANQHFHGDPSGRWILTGGL CHHHHHHHCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC GGMGGAQPLAATMAGFSMIAVECDESRIDFRLKTRYVDKKARSLDEALALLDEAKRGGRP CCCCCCCHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCE VSIGLVGNAADVFAEVVARGITPDCVTDQTSAHDPVNGYLPQGWSVAQWQEARKVDPQGI EEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCE VVPAKQSMARQVQAMLTLQQRGAATLDYGNNIRQMALEMGVANAFDFPGFVPAYIRPLFC EECCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCEEEE EGKGPFRWVALSGDPEDIYKTDAKVKELIPDDAHLHNWLDMARERIAFQGLPARICWVGV CCCCCEEEEEECCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC KDRYRLGQAFNEMVRRGELKAPIVIGRDHLDTGSVASPNRETEAMKDGSDAVSDWPLLNA HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHH LLNTAGGATWVSLHHGGGVGMGFSQHAGVVIVADGSEAAHERLGRVLFNDPATGVMRHAD HHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCHHEECCCCHHHHHHCC AGYELAQRTAREAGLKLPMLGR CCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]