Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027997

Identifier: 238027997

GI number: 238027997

Start: 2778262

End: 2779119

Strand: Reverse

Name: 238027997

Synonym: bglu_1g24460

Alternate gene names: NA

Gene position: 2779119-2778262 (Counterclockwise)

Preceding gene: 238028001

Following gene: 238027996

Centisome position: 71.14

GC content: 74.24

Gene sequence:

>858_bases
ATGTCCGACCCGAATTCCTCGTCCGACGCCGCTTCGTGCGTGCGAGCCGGCGCGCTGGCCGCGCTGCTGGAGACCGATCC
CGCTGCCAAGGCGCGGCAGGCGCGTGCGCTGCATGCGGCGCTGCTCGCCGGGCACGCCCGGCTCGAAGCGGCGCGCCGCT
TCGCAGCGCCGCCGGCGCTGCCGGGTCGCCCGGCGCGGCCCGAGCTGGTCGAGCCGCGCCTGCTGCGGCGCCGCTCGATG
CGCTCGCCGCAAGGGCGCGCGACGCTGCTGCACGCGCTCGCCCATATCGAGTTCAACGCGATCAATCTCGCGCTCGACGC
GGTGTGGCGCTTCGCCGGGATGCCCGACGCGTTCTATGCCGACTGGCTCAGGGTGGCGGCCGAGGAAGCCAGCCACTACG
GGCTGCTGGCCGAGCGCCTGCGCGACTACGGCCATGCCTACGGCGACTTTCCGGCCCACGACGGCCTCTGGGAGATGTGC
GAGCGAACCGCCGGCGATGTGCTGGCGCGCATGGCGCTCGTGCCGCGCACGCTCGAGGCGCGCGGGCTCGACGCGTCGCC
GCCGATCCGCGCGCGGCTCGCGCAGGCGGGCGACCACGCCTCGGCGGCGATCCTCGACGTGATCCTGCGCGACGAGATCG
GCCACGTCGCGATCGGCAACCGCTGGTTCCGCCACCTCTGCGCCCAGGCGGGGCTCGACGCGCATTCGGCCTACCTGCGG
CTGGCCGCGCAATACCATGCGCCACGCCTGCGCGGTCCGTTCAACTTCGACGCGCGCCGCGACGCCGGTTTCGACGAGAC
CGAACTGGCCGCGCTGGTGAACCAGGACAGCGACGCATCGCCGCCCGCCACGGCATGA

Upstream 100 bases:

>100_bases
ACCGGGTTGCGAGAGGCCATGCGCGCCTCGCGCAGGCTGTGACCCATCATTGTAAAGGCTTGCGTGGTTCGACCGCGCAC
GCTGCTCCGGCGCTGTTTTC

Downstream 100 bases:

>100_bases
GTCTCGGCCCCGATGCCGGGCAAGCGCGCCTCGCTGGCTAGAGAAGTGCCTCTGCACGCGCGCGCCGCGCGCCTGCCGGG
GCGCATCGGCAGGCCGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPALPGRPARPELVEPRLLRRRSM
RSPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYADWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMC
ERTAGDVLARMALVPRTLEARGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLR
LAAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA

Sequences:

>Translated_285_residues
MSDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPALPGRPARPELVEPRLLRRRSM
RSPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYADWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMC
ERTAGDVLARMALVPRTLEARGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLR
LAAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA
>Mature_284_residues
SDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPALPGRPARPELVEPRLLRRRSMR
SPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYADWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMCE
RTAGDVLARMALVPRTLEARGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLRL
AAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 30875; Mature: 30744

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPAL
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PGRPARPELVEPRLLRRRSMRSPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYA
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMCERTAGDVLARMALVPRTLEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHH
RGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLR
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
LAAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPAL
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PGRPARPELVEPRLLRRRSMRSPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYA
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMCERTAGDVLARMALVPRTLEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHH
RGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLR
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
LAAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]