| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027985
Identifier: 238027985
GI number: 238027985
Start: 2766229
End: 2767518
Strand: Direct
Name: 238027985
Synonym: bglu_1g24340
Alternate gene names: NA
Gene position: 2766229-2767518 (Clockwise)
Preceding gene: 238027984
Following gene: 238027987
Centisome position: 70.81
GC content: 69.92
Gene sequence:
>1290_bases ATGAACTGCACGCGCTGGCCGGCCGGCAAGGCGACGATGAGACGGCTCACTGACGCGCATCCTCGCCGCCCGCGCGCCGC GCCGGCGATGGCGGCGGTGCTGCTCGCGGCGGCGCTGGCCACGGCCGCCGTTGCCGCGAAAGCCGCGCCGGCCGCGATCG CGCGCGCGCGCGCCGAGCCTGGCTACGGGTTCGCGGTGCTGTCCGGCGTGCTCGCCGGCCCGGCCGACGAGCCGGCCGCG CAACGCCTGTTGGCCGCGATCGCGCGCGACCGTGGCGTGGCCTTCGTGGTCTATGACGGCAACCTGAAAGGCCCGCACGA AGTCTGCAGCGATGCGGTCTACGATGCGCGCGTCGCGCTGCTGAAGTCATCGCGCGTGCCGGTGTTCTACGTTCCCGGGC AGGCCGACTGGGCCGCCTGCGCGACGCGCGAGGCCGGCGGCTATGACGCGGTCGAGCGGCTCGACTATCTGCGCCAGACT TTCCTGTCGGATTCCGAATCGTTCGGCGTGACGCCGCAGCCGCTGACGCGCGAGAGCGAAGTCGCGCGCTTTCGTCCATT CCGCGAGAACATCCGCTGGACGCAGGGCGACACGGTGTTCGTCGCGATCAACGCGCCCTCGCCCAACAATCGCTACTTGA CGGCGGGTGGGCGCAACGGGGAATTCGAGGATCGCGCGATCGCCAATGCGTTCTGGATCGATCATTCGGCCGAGTTCGCG AAACGCCGCAATGCGCGCGCGCTGGTGATCCTGGTCGAGGGCGATCCGCAGTTCGAACGCTACGAGCGCGAGCGCTTCGC ATGGCTACGGTTCGGACACACCCGTCGTGACGGCTTTCTGGAGTTCAAGCGCGCGCTGGTGAAGGCCACCTCGACGTTCC ACGGCACGATCCTGGTGATTCACGCGAGCGACGAGGCGTTGCGCGGCGGCTTTCGCATCGACCAGCCCCTGCACGATGAA AAAGGTGATCGCATCAATAACCTGACGCGCATCGCGATCGCGCCGCGCGATCCGTTCGCGCAATGGATCAGGATCACGGT GAACCCGGCCAGGCGGCCGATGTTCGGGGTGAGCGTGCAGGCGGTGCCGAGCAACCTGCCGGTGCCGCCCGCGCTACCGC TGATACCGCGGGACGACACGCCGTTGCCGCAGATGCCGGAGATTCCCGCGGTGCCGGAGATTCCGGATTCGGCCGGCGCA TCGGCCGTGCCGGGCAGCGTGCCGGCATCGATGCCGGCCCTGCCGGAAGGCGAGGACCGGCCCCCTTCCCTGCCGGCCGC CCCGCGTTGA
Upstream 100 bases:
>100_bases TACCACGAGACGGCCCGGCCCGAACCGCATCCGGCGCTGGCGCGGCTGCGCGGCATCGATCCCGACGAGCTGAAGCCGCG CGAAGCGCTCGATCTGCTCT
Downstream 100 bases:
>100_bases AGCGTGTGCGGTACGCGCCGGTCGGATCGGCCGCCGGCGCGGCCCGCGGCTCAGTGCAGCGTACGGCCTTGCGCCGGCGC ATCGTCCTCGTCGTCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MNCTRWPAGKATMRRLTDAHPRRPRAAPAMAAVLLAAALATAAVAAKAAPAAIARARAEPGYGFAVLSGVLAGPADEPAA QRLLAAIARDRGVAFVVYDGNLKGPHEVCSDAVYDARVALLKSSRVPVFYVPGQADWAACATREAGGYDAVERLDYLRQT FLSDSESFGVTPQPLTRESEVARFRPFRENIRWTQGDTVFVAINAPSPNNRYLTAGGRNGEFEDRAIANAFWIDHSAEFA KRRNARALVILVEGDPQFERYERERFAWLRFGHTRRDGFLEFKRALVKATSTFHGTILVIHASDEALRGGFRIDQPLHDE KGDRINNLTRIAIAPRDPFAQWIRITVNPARRPMFGVSVQAVPSNLPVPPALPLIPRDDTPLPQMPEIPAVPEIPDSAGA SAVPGSVPASMPALPEGEDRPPSLPAAPR
Sequences:
>Translated_429_residues MNCTRWPAGKATMRRLTDAHPRRPRAAPAMAAVLLAAALATAAVAAKAAPAAIARARAEPGYGFAVLSGVLAGPADEPAA QRLLAAIARDRGVAFVVYDGNLKGPHEVCSDAVYDARVALLKSSRVPVFYVPGQADWAACATREAGGYDAVERLDYLRQT FLSDSESFGVTPQPLTRESEVARFRPFRENIRWTQGDTVFVAINAPSPNNRYLTAGGRNGEFEDRAIANAFWIDHSAEFA KRRNARALVILVEGDPQFERYERERFAWLRFGHTRRDGFLEFKRALVKATSTFHGTILVIHASDEALRGGFRIDQPLHDE KGDRINNLTRIAIAPRDPFAQWIRITVNPARRPMFGVSVQAVPSNLPVPPALPLIPRDDTPLPQMPEIPAVPEIPDSAGA SAVPGSVPASMPALPEGEDRPPSLPAAPR >Mature_429_residues MNCTRWPAGKATMRRLTDAHPRRPRAAPAMAAVLLAAALATAAVAAKAAPAAIARARAEPGYGFAVLSGVLAGPADEPAA QRLLAAIARDRGVAFVVYDGNLKGPHEVCSDAVYDARVALLKSSRVPVFYVPGQADWAACATREAGGYDAVERLDYLRQT FLSDSESFGVTPQPLTRESEVARFRPFRENIRWTQGDTVFVAINAPSPNNRYLTAGGRNGEFEDRAIANAFWIDHSAEFA KRRNARALVILVEGDPQFERYERERFAWLRFGHTRRDGFLEFKRALVKATSTFHGTILVIHASDEALRGGFRIDQPLHDE KGDRINNLTRIAIAPRDPFAQWIRITVNPARRPMFGVSVQAVPSNLPVPPALPLIPRDDTPLPQMPEIPAVPEIPDSAGA SAVPGSVPASMPALPEGEDRPPSLPAAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46650; Mature: 46650
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCTRWPAGKATMRRLTDAHPRRPRAAPAMAAVLLAAALATAAVAAKAAPAAIARARAEP CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GYGFAVLSGVLAGPADEPAAQRLLAAIARDRGVAFVVYDGNLKGPHEVCSDAVYDARVAL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LKSSRVPVFYVPGQADWAACATREAGGYDAVERLDYLRQTFLSDSESFGVTPQPLTRESE HHCCCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH VARFRPFRENIRWTQGDTVFVAINAPSPNNRYLTAGGRNGEFEDRAIANAFWIDHSAEFA HHHHCCHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHEEEECCCHHHH KRRNARALVILVEGDPQFERYERERFAWLRFGHTRRDGFLEFKRALVKATSTFHGTILVI HCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE HASDEALRGGFRIDQPLHDEKGDRINNLTRIAIAPRDPFAQWIRITVNPARRPMFGVSVQ ECCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEECEEEE AVPSNLPVPPALPLIPRDDTPLPQMPEIPAVPEIPDSAGASAVPGSVPASMPALPEGEDR ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPSLPAAPR CCCCCCCCC >Mature Secondary Structure MNCTRWPAGKATMRRLTDAHPRRPRAAPAMAAVLLAAALATAAVAAKAAPAAIARARAEP CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GYGFAVLSGVLAGPADEPAAQRLLAAIARDRGVAFVVYDGNLKGPHEVCSDAVYDARVAL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LKSSRVPVFYVPGQADWAACATREAGGYDAVERLDYLRQTFLSDSESFGVTPQPLTRESE HHCCCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH VARFRPFRENIRWTQGDTVFVAINAPSPNNRYLTAGGRNGEFEDRAIANAFWIDHSAEFA HHHHCCHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHEEEECCCHHHH KRRNARALVILVEGDPQFERYERERFAWLRFGHTRRDGFLEFKRALVKATSTFHGTILVI HCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE HASDEALRGGFRIDQPLHDEKGDRINNLTRIAIAPRDPFAQWIRITVNPARRPMFGVSVQ ECCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEECEEEE AVPSNLPVPPALPLIPRDDTPLPQMPEIPAVPEIPDSAGASAVPGSVPASMPALPEGEDR ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPSLPAAPR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA