| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027980
Identifier: 238027980
GI number: 238027980
Start: 2755322
End: 2756227
Strand: Reverse
Name: 238027980
Synonym: bglu_1g24290
Alternate gene names: NA
Gene position: 2756227-2755322 (Counterclockwise)
Preceding gene: 238027982
Following gene: 238027977
Centisome position: 70.55
GC content: 67.88
Gene sequence:
>906_bases TTGTACCCGACGTTCAAACCCATCGCCCACCGCCTGGTGGTGCTCACCGCGACCTGCCTTGCTGCGTTCTCGCTTTGCCC CAGTTCGCTCAAGGCCGTGCCAGGGCACACTCCCGAGCCGGTCGACATCGCGGTTCCCGCGATTCCCCAACCCGCGTCCC TGGTCGACGTGCCGGCGTCCTTCGACGAACCGGCCCCGGCGTTCGACGCGTCACCGCGGCTGACCCGTTTTACCCGTATG CCTGAGCGCATGGTGGGCGCGTTCTGGCCCACGGTGGCTGGGGTTGCGCAGGTGGTCGTGCCTCGCCCGGGGTTCCGCGT GACGGAGCAGCAGCTCCTGGCGGTGGCGCCCACGATCAACCGGGACGCGCTGCGCCTGGCCATCCGGGCGATGGAATGTG CCGCGAAGCACTACGGGGACAAGGACCGTCTGGTGGTGATCGACTACTCACTGCCCAGCACCGCGCGGCGGCTCTGGGTC TTCGACCTGCGCAACGGCACGCTGCTCTGGAACGAGTACGTCCTGCACGGGCGCGGATCCGGCGCAGGGCTCTACGCCCG GTCGTTCTCGAACCAGCCGGACAGCGAGCAGTCCAGCCTGGGCCTGTTCGAGCTGGGCAGTCCGTTCAAGAGCCAGTTCG GCCCGGCGATGAGCATGGTGGGGCTGGAGAAGGGCATCAACGACCACGCGGTGGAGCGCGGGATCTGGCTGCACGGCACG GACTACGTGAACGACGAGCGCGCGGCCACGGGCCACGTGTCGCAATCAGAGGGCTGCGCAGCCGTCCAGCGGGGGGTGAT CGTCCCGATGATCAACAGCCTGAAGAAGGGGGCTTATCTCTTCTCGTACTACCCGGACAAGCGCTGGCAGCAGGCGTCGG GGTTCCTGACGGGGAAGCTGTGCTGA
Upstream 100 bases:
>100_bases CCCGCGCTGAACCACCACGGCCCCCCCGCTCAGGGGCCATCACCCACCGTCGCCAACAACACGACAAGGAGGCGATCACC ACACGTTCTCGGAGGAGACC
Downstream 100 bases:
>100_bases TCCGGGGGCACCCCCGATCTTGCCGACCCGAATCGACCTGCTACGTTGAGTAGGCCGCCCACCACCCAGAACCGGAGGAC CCGATGACCACCACCTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPASFDEPAPAFDASPRLTRFTRM PERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTINRDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWV FDLRNGTLLWNEYVLHGRGSGAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKLC
Sequences:
>Translated_301_residues MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPASFDEPAPAFDASPRLTRFTRM PERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTINRDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWV FDLRNGTLLWNEYVLHGRGSGAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKLC >Mature_301_residues MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPASFDEPAPAFDASPRLTRFTRM PERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTINRDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWV FDLRNGTLLWNEYVLHGRGSGAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32844; Mature: 32844
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPAS CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCC FDEPAPAFDASPRLTRFTRMPERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTIN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHEECCCCC RDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWVFDLRNGTLLWNEYVLHGRGS HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCC GAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT CCCEEECCCCCCCCCHHHCCCHHHCCCHHHHHHCHHHHHHHHHHCCCHHHHHCCEEECCC DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKL CCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCHHHHHHCCCEEECC C C >Mature Secondary Structure MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPAS CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCC FDEPAPAFDASPRLTRFTRMPERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTIN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHEECCCCC RDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWVFDLRNGTLLWNEYVLHGRGS HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCC GAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT CCCEEECCCCCCCCCHHHCCCHHHCCCHHHHHHCHHHHHHHHHHCCCHHHHHCCEEECCC DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKL CCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCHHHHHHCCCEEECC C C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA