Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027980

Identifier: 238027980

GI number: 238027980

Start: 2755322

End: 2756227

Strand: Reverse

Name: 238027980

Synonym: bglu_1g24290

Alternate gene names: NA

Gene position: 2756227-2755322 (Counterclockwise)

Preceding gene: 238027982

Following gene: 238027977

Centisome position: 70.55

GC content: 67.88

Gene sequence:

>906_bases
TTGTACCCGACGTTCAAACCCATCGCCCACCGCCTGGTGGTGCTCACCGCGACCTGCCTTGCTGCGTTCTCGCTTTGCCC
CAGTTCGCTCAAGGCCGTGCCAGGGCACACTCCCGAGCCGGTCGACATCGCGGTTCCCGCGATTCCCCAACCCGCGTCCC
TGGTCGACGTGCCGGCGTCCTTCGACGAACCGGCCCCGGCGTTCGACGCGTCACCGCGGCTGACCCGTTTTACCCGTATG
CCTGAGCGCATGGTGGGCGCGTTCTGGCCCACGGTGGCTGGGGTTGCGCAGGTGGTCGTGCCTCGCCCGGGGTTCCGCGT
GACGGAGCAGCAGCTCCTGGCGGTGGCGCCCACGATCAACCGGGACGCGCTGCGCCTGGCCATCCGGGCGATGGAATGTG
CCGCGAAGCACTACGGGGACAAGGACCGTCTGGTGGTGATCGACTACTCACTGCCCAGCACCGCGCGGCGGCTCTGGGTC
TTCGACCTGCGCAACGGCACGCTGCTCTGGAACGAGTACGTCCTGCACGGGCGCGGATCCGGCGCAGGGCTCTACGCCCG
GTCGTTCTCGAACCAGCCGGACAGCGAGCAGTCCAGCCTGGGCCTGTTCGAGCTGGGCAGTCCGTTCAAGAGCCAGTTCG
GCCCGGCGATGAGCATGGTGGGGCTGGAGAAGGGCATCAACGACCACGCGGTGGAGCGCGGGATCTGGCTGCACGGCACG
GACTACGTGAACGACGAGCGCGCGGCCACGGGCCACGTGTCGCAATCAGAGGGCTGCGCAGCCGTCCAGCGGGGGGTGAT
CGTCCCGATGATCAACAGCCTGAAGAAGGGGGCTTATCTCTTCTCGTACTACCCGGACAAGCGCTGGCAGCAGGCGTCGG
GGTTCCTGACGGGGAAGCTGTGCTGA

Upstream 100 bases:

>100_bases
CCCGCGCTGAACCACCACGGCCCCCCCGCTCAGGGGCCATCACCCACCGTCGCCAACAACACGACAAGGAGGCGATCACC
ACACGTTCTCGGAGGAGACC

Downstream 100 bases:

>100_bases
TCCGGGGGCACCCCCGATCTTGCCGACCCGAATCGACCTGCTACGTTGAGTAGGCCGCCCACCACCCAGAACCGGAGGAC
CCGATGACCACCACCTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPASFDEPAPAFDASPRLTRFTRM
PERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTINRDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWV
FDLRNGTLLWNEYVLHGRGSGAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT
DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKLC

Sequences:

>Translated_301_residues
MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPASFDEPAPAFDASPRLTRFTRM
PERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTINRDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWV
FDLRNGTLLWNEYVLHGRGSGAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT
DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKLC
>Mature_301_residues
MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPASFDEPAPAFDASPRLTRFTRM
PERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTINRDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWV
FDLRNGTLLWNEYVLHGRGSGAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT
DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32844; Mature: 32844

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPAS
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCC
FDEPAPAFDASPRLTRFTRMPERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTIN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHEECCCCC
RDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWVFDLRNGTLLWNEYVLHGRGS
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCC
GAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT
CCCEEECCCCCCCCCHHHCCCHHHCCCHHHHHHCHHHHHHHHHHCCCHHHHHCCEEECCC
DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKL
CCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCHHHHHHCCCEEECC
C
C
>Mature Secondary Structure
MYPTFKPIAHRLVVLTATCLAAFSLCPSSLKAVPGHTPEPVDIAVPAIPQPASLVDVPAS
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCC
FDEPAPAFDASPRLTRFTRMPERMVGAFWPTVAGVAQVVVPRPGFRVTEQQLLAVAPTIN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHEECCCCC
RDALRLAIRAMECAAKHYGDKDRLVVIDYSLPSTARRLWVFDLRNGTLLWNEYVLHGRGS
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCC
GAGLYARSFSNQPDSEQSSLGLFELGSPFKSQFGPAMSMVGLEKGINDHAVERGIWLHGT
CCCEEECCCCCCCCCHHHCCCHHHCCCHHHHHHCHHHHHHHHHHCCCHHHHHCCEEECCC
DYVNDERAATGHVSQSEGCAAVQRGVIVPMINSLKKGAYLFSYYPDKRWQQASGFLTGKL
CCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCHHHHHHCCCEEECC
C
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA