| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027979
Identifier: 238027979
GI number: 238027979
Start: 2751671
End: 2752810
Strand: Direct
Name: 238027979
Synonym: bglu_1g24280
Alternate gene names: NA
Gene position: 2751671-2752810 (Clockwise)
Preceding gene: 238027978
Following gene: 238027981
Centisome position: 70.44
GC content: 70.7
Gene sequence:
>1140_bases GTGTACGTGCTGTCGAACCCGTCCATGCCTGGGCAGGTGAAGATCGGTCGCACCGAGCGCAACCCCATCACCCGCCGTGA CGAGCTGTCGCGCGCCACCGGGGTGCCCACGCCCTTCGTGCTGGAAAGCTGGGAGCTGTTCAACGACTGCTGGAAGGCCG AAAAGGACGTGCACCGTGAGCTGCAGCGCCTGGGGCAACGCGTGTCCAACGACCGCGAGTTCTTCTGGGTCAGCGTGTCC CAAGCCAACGCGGTGTTGAAGCGCCTGGCCGCCCTCGAACACGGTGTCGATCCCGGTGCCCCGCCGAGCCGTCAGGCCCG TGCCGCCTCCGACGATCAGGTGGACCGCGGTGTGAAGCTGCTCTTCGGTCTGGACGGCCAGATGCGAGACGCCCGCCAGG CCCTCTCGAACTTCGAGCAAGCCGCCGCCCTCGGGTCCGCCCGTGGCCGCTACTACGCCGGCCGGGCCGCCCACGTGCTG GCCAACGATGCACGCCCGAAGGATCGCCCGGAGCTGGACCACCGCGCCCAGCACCACTACCAGACGGCCATGGCCCATCC CACCGACCCGTCCCGGGTGGCCGCCGCCGGATGGTCGGCCAAGCTCTTCTGGCAACGCCAGCAGTACGGGGCCGGGGAGA AAGCCTGGAACACCTTCCTGGAGCGCGCCGCGCAGCTCGACCAGCCGTCGAACGACGTGCTGACCCTGCTGCTGGACCAG ATCGAGTTCTGCGTGAAGCACCGCAAGCTGTGGCGCTGCGCCGCGGTCGAGAAGCACCGCGATGCCCTGCTGGCCGCGGC CAAGCCGTCCTTCCACACCCTGGCCATCGTCGCGCTGCGCCGCGTCGGTCAGCCCTGGTGGCGCTGGCCCCTGTTCGTCG CCGTCGACGTGTTCCGCTGGAGCCCCATCGCGCTCACCGGCCTGGCCCTCACCGCCGCGCTCTACGCCGCCCTGGACGGG TGGTGGTGGGTCCTCGCCCTGCTGGCCACGGTGGTCGCCGGCTGGTTCGAGCACCGCCCGAAGCGAACCCGCGACGACGG CTCGCCGGGCCGCTACCCGCGCCGGTCGAACCGTTCCAGCTCAAACCGCACGTCCGGTTACCAACGTGGGGGCCAACGCT CCACGTACCGGCGCCGCTGA
Upstream 100 bases:
>100_bases ACGACGACCCCCAGGAGACCGCATGGCCTACGAGCCCCGTCCGATCCTCACGACCACGCCTGGCCCTGCGCCCATCCCGG AGCGGTCCCACCGCGGCTAC
Downstream 100 bases:
>100_bases ATCACAACCACCAGGAGGAGACGATGGAAACGGATCACAACGATGTGCTGGACTGCGAGGAGGGGCGCTACCCCTACCCG GACGCGTGCGTGTTCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MYVLSNPSMPGQVKIGRTERNPITRRDELSRATGVPTPFVLESWELFNDCWKAEKDVHRELQRLGQRVSNDREFFWVSVS QANAVLKRLAALEHGVDPGAPPSRQARAASDDQVDRGVKLLFGLDGQMRDARQALSNFEQAAALGSARGRYYAGRAAHVL ANDARPKDRPELDHRAQHHYQTAMAHPTDPSRVAAAGWSAKLFWQRQQYGAGEKAWNTFLERAAQLDQPSNDVLTLLLDQ IEFCVKHRKLWRCAAVEKHRDALLAAAKPSFHTLAIVALRRVGQPWWRWPLFVAVDVFRWSPIALTGLALTAALYAALDG WWWVLALLATVVAGWFEHRPKRTRDDGSPGRYPRRSNRSSSNRTSGYQRGGQRSTYRRR
Sequences:
>Translated_379_residues MYVLSNPSMPGQVKIGRTERNPITRRDELSRATGVPTPFVLESWELFNDCWKAEKDVHRELQRLGQRVSNDREFFWVSVS QANAVLKRLAALEHGVDPGAPPSRQARAASDDQVDRGVKLLFGLDGQMRDARQALSNFEQAAALGSARGRYYAGRAAHVL ANDARPKDRPELDHRAQHHYQTAMAHPTDPSRVAAAGWSAKLFWQRQQYGAGEKAWNTFLERAAQLDQPSNDVLTLLLDQ IEFCVKHRKLWRCAAVEKHRDALLAAAKPSFHTLAIVALRRVGQPWWRWPLFVAVDVFRWSPIALTGLALTAALYAALDG WWWVLALLATVVAGWFEHRPKRTRDDGSPGRYPRRSNRSSSNRTSGYQRGGQRSTYRRR >Mature_379_residues MYVLSNPSMPGQVKIGRTERNPITRRDELSRATGVPTPFVLESWELFNDCWKAEKDVHRELQRLGQRVSNDREFFWVSVS QANAVLKRLAALEHGVDPGAPPSRQARAASDDQVDRGVKLLFGLDGQMRDARQALSNFEQAAALGSARGRYYAGRAAHVL ANDARPKDRPELDHRAQHHYQTAMAHPTDPSRVAAAGWSAKLFWQRQQYGAGEKAWNTFLERAAQLDQPSNDVLTLLLDQ IEFCVKHRKLWRCAAVEKHRDALLAAAKPSFHTLAIVALRRVGQPWWRWPLFVAVDVFRWSPIALTGLALTAALYAALDG WWWVLALLATVVAGWFEHRPKRTRDDGSPGRYPRRSNRSSSNRTSGYQRGGQRSTYRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42977; Mature: 42977
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVLSNPSMPGQVKIGRTERNPITRRDELSRATGVPTPFVLESWELFNDCWKAEKDVHRE CEEECCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LQRLGQRVSNDREFFWVSVSQANAVLKRLAALEHGVDPGAPPSRQARAASDDQVDRGVKL HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHEE LFGLDGQMRDARQALSNFEQAAALGSARGRYYAGRAAHVLANDARPKDRPELDHRAQHHY EECCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCCCCCCHHHHHHHHH QTAMAHPTDPSRVAAAGWSAKLFWQRQQYGAGEKAWNTFLERAAQLDQPSNDVLTLLLDQ HHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH IEFCVKHRKLWRCAAVEKHRDALLAAAKPSFHTLAIVALRRVGQPWWRWPLFVAVDVFRW HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC SPIALTGLALTAALYAALDGWWWVLALLATVVAGWFEHRPKRTRDDGSPGRYPRRSNRSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SNRTSGYQRGGQRSTYRRR CCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MYVLSNPSMPGQVKIGRTERNPITRRDELSRATGVPTPFVLESWELFNDCWKAEKDVHRE CEEECCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LQRLGQRVSNDREFFWVSVSQANAVLKRLAALEHGVDPGAPPSRQARAASDDQVDRGVKL HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHEE LFGLDGQMRDARQALSNFEQAAALGSARGRYYAGRAAHVLANDARPKDRPELDHRAQHHY EECCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCCCCCCHHHHHHHHH QTAMAHPTDPSRVAAAGWSAKLFWQRQQYGAGEKAWNTFLERAAQLDQPSNDVLTLLLDQ HHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH IEFCVKHRKLWRCAAVEKHRDALLAAAKPSFHTLAIVALRRVGQPWWRWPLFVAVDVFRW HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC SPIALTGLALTAALYAALDGWWWVLALLATVVAGWFEHRPKRTRDDGSPGRYPRRSNRSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SNRTSGYQRGGQRSTYRRR CCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA