| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027974
Identifier: 238027974
GI number: 238027974
Start: 2730049
End: 2730798
Strand: Reverse
Name: 238027974
Synonym: bglu_1g24210
Alternate gene names: NA
Gene position: 2730798-2730049 (Counterclockwise)
Preceding gene: 238027977
Following gene: 238027972
Centisome position: 69.9
GC content: 66.0
Gene sequence:
>750_bases ATGAAGCACAACGTCTTGCCCGTCGCGACGGCGACGGTATTGTGCGGCCTGCTGGCCGCGTGCGCGAACGGCGGACCGGA CGTGAATGGCTTGGTCCAGAAAGCCAACAGCACAGTAGAGAACGCGATCCACAGCGTGACTGGGAGCAGCGGTACCGGCG GGGGCGAGGTCACCAACGCGGCCGGTCCGCTCTACACCCCGATCTCCGGCGGCAGCAGCTTGCAGGGACTCTTCGCCGGG CAGAACCAGCAGCTTGCCAACTACGGCAAGATTGCCTACCCCCGGGTGGCGCTGGAATACCTCTCGTACGGGGCGAGCCA GTCCTGCTGGAAGGTGCGGGCGACGATTTGGACCAACGCAAAGCACTCCCACGATGAAACCTTCCAGGTGTGCGACGTGC CGATCGCGGTGCGGGACGCCGTGGGCCAAATGGGCCAGCTCAACGCGCAGGGGATCATCGACAAGATCGACGAGACGCGG GCCCCGCTCAACGTGCCGAACACGGGCGACCAGCGCACCCGCGGTCCATTACCTCCGTTGCGCGCCATGAGCGTCCCACT AGCGAACACCGGGCCGATGTTCCAAGCCAACCCGTTGCAGGTGCGCCTGGACGCGATCAACGCGCGGATCGCCTACGTGG CCAAGTACGTCCCGCTCGGCGACACCAGCGCCATGAGCGTGGTCAGCTCGGCGTTCTACGACTACCGCGTGTGGATCTGG CGTTTCGACCCGGCGGGCAACCTCGGCTGA
Upstream 100 bases:
>100_bases CGGCTTTTTGCAGTGACCGGCTGACGCGGGGCGATGGCGTGCGTGGGCGCGCTGCCGGCTCGCGGGGAACAATCAACAAG CAACAACAAGAGGCAAAACG
Downstream 100 bases:
>100_bases TCGTAGGCCGTCCGGCGCACCCTGCACCAGAAGAAAGGACACGAGCATGAGCAGCTTCCAGGAACAGATCGACCAGGCGA TCAAGGCCCAGGACCTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKHNVLPVATATVLCGLLAACANGGPDVNGLVQKANSTVENAIHSVTGSSGTGGGEVTNAAGPLYTPISGGSSLQGLFAG QNQQLANYGKIAYPRVALEYLSYGASQSCWKVRATIWTNAKHSHDETFQVCDVPIAVRDAVGQMGQLNAQGIIDKIDETR APLNVPNTGDQRTRGPLPPLRAMSVPLANTGPMFQANPLQVRLDAINARIAYVAKYVPLGDTSAMSVVSSAFYDYRVWIW RFDPAGNLG
Sequences:
>Translated_249_residues MKHNVLPVATATVLCGLLAACANGGPDVNGLVQKANSTVENAIHSVTGSSGTGGGEVTNAAGPLYTPISGGSSLQGLFAG QNQQLANYGKIAYPRVALEYLSYGASQSCWKVRATIWTNAKHSHDETFQVCDVPIAVRDAVGQMGQLNAQGIIDKIDETR APLNVPNTGDQRTRGPLPPLRAMSVPLANTGPMFQANPLQVRLDAINARIAYVAKYVPLGDTSAMSVVSSAFYDYRVWIW RFDPAGNLG >Mature_249_residues MKHNVLPVATATVLCGLLAACANGGPDVNGLVQKANSTVENAIHSVTGSSGTGGGEVTNAAGPLYTPISGGSSLQGLFAG QNQQLANYGKIAYPRVALEYLSYGASQSCWKVRATIWTNAKHSHDETFQVCDVPIAVRDAVGQMGQLNAQGIIDKIDETR APLNVPNTGDQRTRGPLPPLRAMSVPLANTGPMFQANPLQVRLDAINARIAYVAKYVPLGDTSAMSVVSSAFYDYRVWIW RFDPAGNLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26314; Mature: 26314
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHNVLPVATATVLCGLLAACANGGPDVNGLVQKANSTVENAIHSVTGSSGTGGGEVTNA CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AGPLYTPISGGSSLQGLFAGQNQQLANYGKIAYPRVALEYLSYGASQSCWKVRATIWTNA CCCEECCCCCCCCCCCEECCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECC KHSHDETFQVCDVPIAVRDAVGQMGQLNAQGIIDKIDETRAPLNVPNTGDQRTRGPLPPL CCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH RAMSVPLANTGPMFQANPLQVRLDAINARIAYVAKYVPLGDTSAMSVVSSAFYDYRVWIW HHHCCCCCCCCCCCCCCCCEEEEEHHHHHEEHHHEECCCCCHHHHHHHHHHHEEEEEEEE RFDPAGNLG EECCCCCCC >Mature Secondary Structure MKHNVLPVATATVLCGLLAACANGGPDVNGLVQKANSTVENAIHSVTGSSGTGGGEVTNA CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AGPLYTPISGGSSLQGLFAGQNQQLANYGKIAYPRVALEYLSYGASQSCWKVRATIWTNA CCCEECCCCCCCCCCCEECCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECC KHSHDETFQVCDVPIAVRDAVGQMGQLNAQGIIDKIDETRAPLNVPNTGDQRTRGPLPPL CCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH RAMSVPLANTGPMFQANPLQVRLDAINARIAYVAKYVPLGDTSAMSVVSSAFYDYRVWIW HHHCCCCCCCCCCCCCCCCEEEEEHHHHHEEHHHEECCCCCHHHHHHHHHHHEEEEEEEE RFDPAGNLG EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA