| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027972
Identifier: 238027972
GI number: 238027972
Start: 2725201
End: 2725638
Strand: Reverse
Name: 238027972
Synonym: bglu_1g24180
Alternate gene names: NA
Gene position: 2725638-2725201 (Counterclockwise)
Preceding gene: 238027974
Following gene: 238027971
Centisome position: 69.77
GC content: 68.49
Gene sequence:
>438_bases GTGCTGTACCGCGGCGTCAACCGCACCATGCACGACGCCGGCCTGGGGCTACGCCCGCGCAATCCGGACAAGCCGTTCGA GCGACACGTGTTTTTCGACGGCACGTGGAAATGCAACGGGGCGGTCACCCACGGTCCGCCGCGCAGCCAGGCGGTGCATG CGCATCAGTGGGACAGCGAGGGCTTCAACGGCCCGGCGCTCTCGTTCACCACCCTCGAGAAAGTCGCGCGGCGCTTCGCC ACCACCGACGGGCTGGAGGACGGCGTGGTGTACGCGGTGACCGTGGCCGAGCTAGAAGCAGCAGGGTGCCGCCTGGAAGA TCCCAGGATCCACACCTCCGGACTGCAGAACCCCGAGGAGCACGAGGTGATCGTGGTCCCACCGGCCGGCGACGGGCTGA GCATTGACCGGGTGCGCGTGATCGAGGTGGTGGCGTAG
Upstream 100 bases:
>100_bases CGCCTGTTGCGTTATGCTGCGGTTCCGCTCGACCGCACCATCGCACCGCATGGCCATCCAACCCGAACTTCACCCGCCTC TGGACCTTCAGCCGGACACC
Downstream 100 bases:
>100_bases ACCTGGGCGAACGGCTGGGCTCGGGTGCGTGAAAACCCGCCTCCGGCGGAAGGGGCGATCCCGCTTCGCGCGGTGGGCCC GGGGCCGTGGTCGGGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MLYRGVNRTMHDAGLGLRPRNPDKPFERHVFFDGTWKCNGAVTHGPPRSQAVHAHQWDSEGFNGPALSFTTLEKVARRFA TTDGLEDGVVYAVTVAELEAAGCRLEDPRIHTSGLQNPEEHEVIVVPPAGDGLSIDRVRVIEVVA
Sequences:
>Translated_145_residues MLYRGVNRTMHDAGLGLRPRNPDKPFERHVFFDGTWKCNGAVTHGPPRSQAVHAHQWDSEGFNGPALSFTTLEKVARRFA TTDGLEDGVVYAVTVAELEAAGCRLEDPRIHTSGLQNPEEHEVIVVPPAGDGLSIDRVRVIEVVA >Mature_145_residues MLYRGVNRTMHDAGLGLRPRNPDKPFERHVFFDGTWKCNGAVTHGPPRSQAVHAHQWDSEGFNGPALSFTTLEKVARRFA TTDGLEDGVVYAVTVAELEAAGCRLEDPRIHTSGLQNPEEHEVIVVPPAGDGLSIDRVRVIEVVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15908; Mature: 15908
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRGVNRTMHDAGLGLRPRNPDKPFERHVFFDGTWKCNGAVTHGPPRSQAVHAHQWDSE CCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCCEEECCEECCCCCCCCCEECCCCCCC GFNGPALSFTTLEKVARRFATTDGLEDGVVYAVTVAELEAAGCRLEDPRIHTSGLQNPEE CCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHCCCCCCCCCEECCCCCCCCCC HEVIVVPPAGDGLSIDRVRVIEVVA CCEEEECCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MLYRGVNRTMHDAGLGLRPRNPDKPFERHVFFDGTWKCNGAVTHGPPRSQAVHAHQWDSE CCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCCEEECCEECCCCCCCCCEECCCCCCC GFNGPALSFTTLEKVARRFATTDGLEDGVVYAVTVAELEAAGCRLEDPRIHTSGLQNPEE CCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHCCCCCCCCCEECCCCCCCCCC HEVIVVPPAGDGLSIDRVRVIEVVA CCEEEECCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA