| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027961
Identifier: 238027961
GI number: 238027961
Start: 2689753
End: 2691120
Strand: Reverse
Name: 238027961
Synonym: bglu_1g24070
Alternate gene names: NA
Gene position: 2691120-2689753 (Counterclockwise)
Preceding gene: 238027964
Following gene: 238027960
Centisome position: 68.89
GC content: 61.33
Gene sequence:
>1368_bases GTGATTCGAGGCTACACCGAAGACGAGTTTGGAACGAAGCTGGGCGCCGTGTTGTCGGCGTCGCGACCGATCCACAGCAT CGAGTACCTGAAGGGGCGCGACAAGGAGCTTGAAACGATCAAGCAGAGCTTGTTTGCTCCGGGCCGGCATGTCTTCATCT ACGGCGACCGAGGCGTCGGCAAGAGTTCTCTCGGGCAGACGGCTGCGGTTCAATACCAGAGCGCCAGCGCCTCGCCCGTG TTTGTGTCGGGTTCGCCCGATGACACGTTCAGCACCGTGATCGCCAACATCGTCACCCAAGCGCTTCGGCAACCTCGAAC GGAGAGCGTTAAAACGACCCGCTCGGCGTCCATCGATATGGCTCGCGTGAAGATGTCCGCCGGCACGGAGACCAGTGCGG TGGACATTGCCGACCGTATCCGATCCATTGGTGATGCGGTCGCGCTGCTGGAAGAGGTCGCCGAGAAGCGCGACGGAAAC ACGGCGGTCGTGATCGACGAGTTCGACGCGATTCTGGATGCAGGCGAGCGCAACAAGTTTGCGGCGCTGCTCAAACAGAT GGGCGATCGGTCCGTCAACATCAAGTTCATTTTCACCGGCATCGGAAAGTCTCTTGACGAGCTGCTCGGCGCGCATCAGT CCTCGTATCGCCAGTTGGAGCAGGTCGAGTTGCCGCGCCTGGGCTGGGACGCTCGCCGGGAGATCGTTCAGGCTGCCGCC GACGCGTTCGAGATCGACCTCGACAACGACGTCAACTGGCGTATCGCCATGGTCAGCGACGGGTTCCCGTACTACATCCA CCTCATCACCGAAAAGATCTTGTGGGGCGCGTTTGGGTCCGACAGCGAGGTCTCGCAGATCGACTCGGACCTCTTTCTCC ATGGGCTCGGGGAGGCGATTCTCTCGACCGCCGGTGAGCTAAAGCGTCCCTACGAAAAGGCCGTTGTTCATCACCCGGAG ATGGAGGATCTTGTATGGGCGACGGCTGACCACGAGGACTTGATCCGATCGCTGGATGGGATCTTCCAGTCCTACCAGGT CGTGATCGGGAAGCGTGCTGACGGACGCCAACCGCTGGAGCGGAGCCGTTTTGCCTCCCAACTTCGGAAGTTGAAGGGCA CCGCATACGGCGCGGTATTGAGCCAGCCGGAAGGGCGCCAAGGCCTCTACACCTATACCGAAAAGATGCTCCGAGGGTAC GTCCGCATGCAGGCGGAAGCGAATGGCATCGCGCTGAGCGGTGAGCGCCCAGTGCCCAGGCAGGCCATGCATGTCGGTAA CGCCCGCAGTGGATATCGCGGTCCGAGCATCCCGCGCGGCGTGAGGACTGAGAAGGACATCGCCGAATGGGACGATTCCA AGCAGTGA
Upstream 100 bases:
>100_bases ACACGTTGGTCCGTTGGATGGCGTCTTGGCGAAGTGCCATAATCGGACGCCATAGGCGCAACCGATGGGCGGGGCTGCCT GGTTGAGAAATGGAGGCGCG
Downstream 100 bases:
>100_bases CCGTGTCCGCCTGACTTTGCGATGAGCACGCGCCCGGCTGTGCCCGGCAGGGGCCCACGTGGTGGGCGGATAAGCGCTCC CGCGGTGCGCGCCTTTCGGT
Product: DNA-binding protein
Products: NA
Alternate protein names: AAA ATPase; ATPase; ATPase Family Protein
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MIRGYTEDEFGTKLGAVLSASRPIHSIEYLKGRDKELETIKQSLFAPGRHVFIYGDRGVGKSSLGQTAAVQYQSASASPV FVSGSPDDTFSTVIANIVTQALRQPRTESVKTTRSASIDMARVKMSAGTETSAVDIADRIRSIGDAVALLEEVAEKRDGN TAVVIDEFDAILDAGERNKFAALLKQMGDRSVNIKFIFTGIGKSLDELLGAHQSSYRQLEQVELPRLGWDARREIVQAAA DAFEIDLDNDVNWRIAMVSDGFPYYIHLITEKILWGAFGSDSEVSQIDSDLFLHGLGEAILSTAGELKRPYEKAVVHHPE MEDLVWATADHEDLIRSLDGIFQSYQVVIGKRADGRQPLERSRFASQLRKLKGTAYGAVLSQPEGRQGLYTYTEKMLRGY VRMQAEANGIALSGERPVPRQAMHVGNARSGYRGPSIPRGVRTEKDIAEWDDSKQ
Sequences:
>Translated_455_residues MIRGYTEDEFGTKLGAVLSASRPIHSIEYLKGRDKELETIKQSLFAPGRHVFIYGDRGVGKSSLGQTAAVQYQSASASPV FVSGSPDDTFSTVIANIVTQALRQPRTESVKTTRSASIDMARVKMSAGTETSAVDIADRIRSIGDAVALLEEVAEKRDGN TAVVIDEFDAILDAGERNKFAALLKQMGDRSVNIKFIFTGIGKSLDELLGAHQSSYRQLEQVELPRLGWDARREIVQAAA DAFEIDLDNDVNWRIAMVSDGFPYYIHLITEKILWGAFGSDSEVSQIDSDLFLHGLGEAILSTAGELKRPYEKAVVHHPE MEDLVWATADHEDLIRSLDGIFQSYQVVIGKRADGRQPLERSRFASQLRKLKGTAYGAVLSQPEGRQGLYTYTEKMLRGY VRMQAEANGIALSGERPVPRQAMHVGNARSGYRGPSIPRGVRTEKDIAEWDDSKQ >Mature_455_residues MIRGYTEDEFGTKLGAVLSASRPIHSIEYLKGRDKELETIKQSLFAPGRHVFIYGDRGVGKSSLGQTAAVQYQSASASPV FVSGSPDDTFSTVIANIVTQALRQPRTESVKTTRSASIDMARVKMSAGTETSAVDIADRIRSIGDAVALLEEVAEKRDGN TAVVIDEFDAILDAGERNKFAALLKQMGDRSVNIKFIFTGIGKSLDELLGAHQSSYRQLEQVELPRLGWDARREIVQAAA DAFEIDLDNDVNWRIAMVSDGFPYYIHLITEKILWGAFGSDSEVSQIDSDLFLHGLGEAILSTAGELKRPYEKAVVHHPE MEDLVWATADHEDLIRSLDGIFQSYQVVIGKRADGRQPLERSRFASQLRKLKGTAYGAVLSQPEGRQGLYTYTEKMLRGY VRMQAEANGIALSGERPVPRQAMHVGNARSGYRGPSIPRGVRTEKDIAEWDDSKQ
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50200; Mature: 50200
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRGYTEDEFGTKLGAVLSASRPIHSIEYLKGRDKELETIKQSLFAPGRHVFIYGDRGVG CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCC KSSLGQTAAVQYQSASASPVFVSGSPDDTFSTVIANIVTQALRQPRTESVKTTRSASIDM HHHCCCHHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH ARVKMSAGTETSAVDIADRIRSIGDAVALLEEVAEKRDGNTAVVIDEFDAILDAGERNKF HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCHHH AALLKQMGDRSVNIKFIFTGIGKSLDELLGAHQSSYRQLEQVELPRLGWDARREIVQAAA HHHHHHHCCCCEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DAFEIDLDNDVNWRIAMVSDGFPYYIHLITEKILWGAFGSDSEVSQIDSDLFLHGLGEAI HHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LSTAGELKRPYEKAVVHHPEMEDLVWATADHEDLIRSLDGIFQSYQVVIGKRADGRQPLE HHHHHHHHCCHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHH RSRFASQLRKLKGTAYGAVLSQPEGRQGLYTYTEKMLRGYVRMQAEANGIALSGERPVPR HHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCEEECCCCCCCH QAMHVGNARSGYRGPSIPRGVRTEKDIAEWDDSKQ HHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC >Mature Secondary Structure MIRGYTEDEFGTKLGAVLSASRPIHSIEYLKGRDKELETIKQSLFAPGRHVFIYGDRGVG CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCC KSSLGQTAAVQYQSASASPVFVSGSPDDTFSTVIANIVTQALRQPRTESVKTTRSASIDM HHHCCCHHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH ARVKMSAGTETSAVDIADRIRSIGDAVALLEEVAEKRDGNTAVVIDEFDAILDAGERNKF HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCHHH AALLKQMGDRSVNIKFIFTGIGKSLDELLGAHQSSYRQLEQVELPRLGWDARREIVQAAA HHHHHHHCCCCEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DAFEIDLDNDVNWRIAMVSDGFPYYIHLITEKILWGAFGSDSEVSQIDSDLFLHGLGEAI HHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LSTAGELKRPYEKAVVHHPEMEDLVWATADHEDLIRSLDGIFQSYQVVIGKRADGRQPLE HHHHHHHHCCHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHH RSRFASQLRKLKGTAYGAVLSQPEGRQGLYTYTEKMLRGYVRMQAEANGIALSGERPVPR HHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCEEECCCCCCCH QAMHVGNARSGYRGPSIPRGVRTEKDIAEWDDSKQ HHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA