| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027942
Identifier: 238027942
GI number: 238027942
Start: 2622051
End: 2622905
Strand: Direct
Name: 238027942
Synonym: bglu_1g23870
Alternate gene names: NA
Gene position: 2622051-2622905 (Clockwise)
Preceding gene: 238027941
Following gene: 238027946
Centisome position: 67.12
GC content: 64.09
Gene sequence:
>855_bases ATGCGCAACCCTCGCCCCGTCTGCCCGAACCCGGACTGCGTCCACCACACCAATCCTCCGGCTGATTTCTACCGGAAGAA CGGCTACCGTCGGACCAAGCATAACGGCCAGCCGGTGCCTCGCTACCAGTGCAAAGCGTGCGGGAAGAACTTCTGCGCCA CGCAGGTCAAACCGATCCATGGGCAGCACCGGCCCGACCTCAACACGCAGGTCTTCAAGATGGCGGTGTCCCGTGTGGGC ATCCGCCGCATGGCGACGGTGCTGGACTGCGGGCGCGAAACGATCCAGCGCAAGATCGAATACCTCGCCGGTGAATCGCG CCGGCATCATGCGTTGTTCCTGCTCCAACTGGCGAAGGACGGTGGCACGGGCTACGTGATGATGGACGAGTTGGAGACCT ACATCCACGCTCGATGGGCGCAGGTCGGTGTCCCGATCGCGGTGCGCGTGAAGACCGGGCATGTCCTCGGGTTCGGGATC GCGCTGCTTTCGTCGAACATGAAGAAGGGGCGCCTGGCCGGCTGGACGAAGGACACGCGACACCTGGTTGTGCCGAAGGT GCTGAACGCACTGCGCCCGGTCATGAAGCCTGGCGGGACGCTGGCGACCGATGGTGAAGCCTCGTATCCGAAGTGGATCG CGCGGGCTCTCCCGGGCGTTCGACACGAGCGGCGCGCGTCCGGGGAACCCGGCGAGTTCGATCCGCTGTTCACGATCAAC TTGACCCATGCGAAGTTGCGGAACGACCTGGCCCGACTGGGACGCAGGTCGTGGGCCACGACCAAAACCATGAAGGCGCT CGACGATCACCTCTGGTTGTGGGTCGCCTGGGTCAATGGGTATCCGTTGAAGTGA
Upstream 100 bases:
>100_bases CCTCGTTTGCAGTGGATGAAAACCCCTAGAAGGCGTGGAGTGGTTGGACTGGAAATGTCCCTTATCCGCTTTTGGATAGT TTTGTGCTATTTTCAGGTCC
Downstream 100 bases:
>100_bases TCAGGTGGCCGATCGAGACCGCTGGTGCGGCGAGCAGCGCATCCGGCGACGATTGCGCGAGCGGTGCCACCTTCGGGCGT TTGACGGCGCGCGGTCGCCG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRNPRPVCPNPDCVHHTNPPADFYRKNGYRRTKHNGQPVPRYQCKACGKNFCATQVKPIHGQHRPDLNTQVFKMAVSRVG IRRMATVLDCGRETIQRKIEYLAGESRRHHALFLLQLAKDGGTGYVMMDELETYIHARWAQVGVPIAVRVKTGHVLGFGI ALLSSNMKKGRLAGWTKDTRHLVVPKVLNALRPVMKPGGTLATDGEASYPKWIARALPGVRHERRASGEPGEFDPLFTIN LTHAKLRNDLARLGRRSWATTKTMKALDDHLWLWVAWVNGYPLK
Sequences:
>Translated_284_residues MRNPRPVCPNPDCVHHTNPPADFYRKNGYRRTKHNGQPVPRYQCKACGKNFCATQVKPIHGQHRPDLNTQVFKMAVSRVG IRRMATVLDCGRETIQRKIEYLAGESRRHHALFLLQLAKDGGTGYVMMDELETYIHARWAQVGVPIAVRVKTGHVLGFGI ALLSSNMKKGRLAGWTKDTRHLVVPKVLNALRPVMKPGGTLATDGEASYPKWIARALPGVRHERRASGEPGEFDPLFTIN LTHAKLRNDLARLGRRSWATTKTMKALDDHLWLWVAWVNGYPLK >Mature_284_residues MRNPRPVCPNPDCVHHTNPPADFYRKNGYRRTKHNGQPVPRYQCKACGKNFCATQVKPIHGQHRPDLNTQVFKMAVSRVG IRRMATVLDCGRETIQRKIEYLAGESRRHHALFLLQLAKDGGTGYVMMDELETYIHARWAQVGVPIAVRVKTGHVLGFGI ALLSSNMKKGRLAGWTKDTRHLVVPKVLNALRPVMKPGGTLATDGEASYPKWIARALPGVRHERRASGEPGEFDPLFTIN LTHAKLRNDLARLGRRSWATTKTMKALDDHLWLWVAWVNGYPLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32091; Mature: 32091
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNPRPVCPNPDCVHHTNPPADFYRKNGYRRTKHNGQPVPRYQCKACGKNFCATQVKPIH CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCC GQHRPDLNTQVFKMAVSRVGIRRMATVLDCGRETIQRKIEYLAGESRRHHALFLLQLAKD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC GGTGYVMMDELETYIHARWAQVGVPIAVRVKTGHVLGFGIALLSSNMKKGRLAGWTKDTR CCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCC HLVVPKVLNALRPVMKPGGTLATDGEASYPKWIARALPGVRHERRASGEPGEFDPLFTIN EEEHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEE LTHAKLRNDLARLGRRSWATTKTMKALDDHLWLWVAWVNGYPLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCC >Mature Secondary Structure MRNPRPVCPNPDCVHHTNPPADFYRKNGYRRTKHNGQPVPRYQCKACGKNFCATQVKPIH CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCC GQHRPDLNTQVFKMAVSRVGIRRMATVLDCGRETIQRKIEYLAGESRRHHALFLLQLAKD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC GGTGYVMMDELETYIHARWAQVGVPIAVRVKTGHVLGFGIALLSSNMKKGRLAGWTKDTR CCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCC HLVVPKVLNALRPVMKPGGTLATDGEASYPKWIARALPGVRHERRASGEPGEFDPLFTIN EEEHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEE LTHAKLRNDLARLGRRSWATTKTMKALDDHLWLWVAWVNGYPLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA