| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027941
Identifier: 238027941
GI number: 238027941
Start: 2620507
End: 2621721
Strand: Direct
Name: 238027941
Synonym: bglu_1g23860
Alternate gene names: NA
Gene position: 2620507-2621721 (Clockwise)
Preceding gene: 238027940
Following gene: 238027942
Centisome position: 67.08
GC content: 62.3
Gene sequence:
>1215_bases ATGACAAATGAAGAAATCGAAGCCTGGGCGAAAGATCCCCGGCGTGCCGACACGCTGCCGTTCGGCCTCTACGAGCCCCG GCACCGGAAGGCCATCACCGGAGCAGCGCTGGTCGTGCGCGGCGTGCTTTACTTCAATGGCGGATACACCGCCGACGTTC GCGACGCGCTCATCAAGTGCTTCGAGCAATACGACGCCGCCATGCGCACGTACTACCAGTTGCTGGAAGAAGCGGCCGGA CAAAAACCGTCGAAGAAAGGGCCGCTCCGCTGGTTCTACGCTGAAGGCATGCAGCCGATGCCGTACGACCAGGCGCCGGG CTTCGCCCGCCTGGCGAAGTCCGTCTCGGTGGATAAGGCTTTCACGTGCGCCATGACGAGTGCCGAAGACAAGGAAGCCA CCGGATTTTTTGAGTACACGGTGTTCTGCCAGAGCGACTGGAAAGCCGCTCTGCGTATCGGTCTTGACGTGCTCGATTTC ACGGTCCCGCGCGCATTCCTCGTTCAGCAACCCGGCATCTTCGAAGCGATGTTCAACGCATTCGCTGAGGCGCTACCGAC CGTTCACGGCCATGCGGGACTCGCGGTCAACCTGCCCCCTATGGGGCGCGAACCTAATGAGGCCGGCGAGTATTTCTACT CGCGGCGGTTTGGCCCAGGGATCGACGTGGGCAACCCCGCCAGGCTGAACATCCGCGCGCTCGAGAACCAGATCAAGACA GTGGATTGGCTTACGGCGCTGAGTGGTCCTCTTGTCCAAGCCGTTGGCGGTGCCACGTCGTTGGCCCTTCCGCCCGATTG GTTCGTGCGTCAGCCCCTCGGTGCCGACGGCTCGGTCATTCAGGCCGGCGTGGCACCGGAATCCGGTGTCTCCGCTGGAC CGGGCTTACCTCCGAATGCGCCGGCCGCGTATGTCGTGCTCAATGCGGCTTTGCGGCCGATTGTGGCCCAGACGCTGGAT ACACTCCAAAGCGGCACGATCAACAGCACTGCGCCTCTCCTGAACAGTGCGGTGGCCTCGGACCACTGGCTACAGCGCTT CAACGTGCCAGACGATCGGCTCAACGACTACTGGCTCGAAGTGCACAAGACCGCCAAGGTGACGGATGTAAAGGCCGTCA TCGCTCAAAACCTGCACCGCCTCCGAAAAACGATGGGGCTCCCAGACCCTGCACCGTCAAACAACATGGGGTATGACGGC GCGCCAGGTGCCTGA
Upstream 100 bases:
>100_bases TATTCGGCACCGAAAGGAAGACAGGCCCCTTCGGTCCGATGTTACCGCCGCCCCCCATACCTTCACCTGCAGCGGGAGGC GGACTTCTGTGAGCGTCACG
Downstream 100 bases:
>100_bases ACGCTAGAAGTCTGTCCCAGGACTCAGCAGCCATTGACGGGTTGAACCGCAAGCTCCTCGAGCGCAAGGGGCTTCAAGGT CTTCCGAGTAGCGCACATGG
Product: putative bacteriophage gp31 protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTNEEIEAWAKDPRRADTLPFGLYEPRHRKAITGAALVVRGVLYFNGGYTADVRDALIKCFEQYDAAMRTYYQLLEEAAG QKPSKKGPLRWFYAEGMQPMPYDQAPGFARLAKSVSVDKAFTCAMTSAEDKEATGFFEYTVFCQSDWKAALRIGLDVLDF TVPRAFLVQQPGIFEAMFNAFAEALPTVHGHAGLAVNLPPMGREPNEAGEYFYSRRFGPGIDVGNPARLNIRALENQIKT VDWLTALSGPLVQAVGGATSLALPPDWFVRQPLGADGSVIQAGVAPESGVSAGPGLPPNAPAAYVVLNAALRPIVAQTLD TLQSGTINSTAPLLNSAVASDHWLQRFNVPDDRLNDYWLEVHKTAKVTDVKAVIAQNLHRLRKTMGLPDPAPSNNMGYDG APGA
Sequences:
>Translated_404_residues MTNEEIEAWAKDPRRADTLPFGLYEPRHRKAITGAALVVRGVLYFNGGYTADVRDALIKCFEQYDAAMRTYYQLLEEAAG QKPSKKGPLRWFYAEGMQPMPYDQAPGFARLAKSVSVDKAFTCAMTSAEDKEATGFFEYTVFCQSDWKAALRIGLDVLDF TVPRAFLVQQPGIFEAMFNAFAEALPTVHGHAGLAVNLPPMGREPNEAGEYFYSRRFGPGIDVGNPARLNIRALENQIKT VDWLTALSGPLVQAVGGATSLALPPDWFVRQPLGADGSVIQAGVAPESGVSAGPGLPPNAPAAYVVLNAALRPIVAQTLD TLQSGTINSTAPLLNSAVASDHWLQRFNVPDDRLNDYWLEVHKTAKVTDVKAVIAQNLHRLRKTMGLPDPAPSNNMGYDG APGA >Mature_403_residues TNEEIEAWAKDPRRADTLPFGLYEPRHRKAITGAALVVRGVLYFNGGYTADVRDALIKCFEQYDAAMRTYYQLLEEAAGQ KPSKKGPLRWFYAEGMQPMPYDQAPGFARLAKSVSVDKAFTCAMTSAEDKEATGFFEYTVFCQSDWKAALRIGLDVLDFT VPRAFLVQQPGIFEAMFNAFAEALPTVHGHAGLAVNLPPMGREPNEAGEYFYSRRFGPGIDVGNPARLNIRALENQIKTV DWLTALSGPLVQAVGGATSLALPPDWFVRQPLGADGSVIQAGVAPESGVSAGPGLPPNAPAAYVVLNAALRPIVAQTLDT LQSGTINSTAPLLNSAVASDHWLQRFNVPDDRLNDYWLEVHKTAKVTDVKAVIAQNLHRLRKTMGLPDPAPSNNMGYDGA PGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43853; Mature: 43722
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEEIEAWAKDPRRADTLPFGLYEPRHRKAITGAALVVRGVLYFNGGYTADVRDALIKC CCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FEQYDAAMRTYYQLLEEAAGQKPSKKGPLRWFYAEGMQPMPYDQAPGFARLAKSVSVDKA HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHH FTCAMTSAEDKEATGFFEYTVFCQSDWKAALRIGLDVLDFTVPRAFLVQQPGIFEAMFNA HEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHH FAEALPTVHGHAGLAVNLPPMGREPNEAGEYFYSRRFGPGIDVGNPARLNIRALENQIKT HHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHH VDWLTALSGPLVQAVGGATSLALPPDWFVRQPLGADGSVIQAGVAPESGVSAGPGLPPNA HHHHHHHCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC PAAYVVLNAALRPIVAQTLDTLQSGTINSTAPLLNSAVASDHWLQRFNVPDDRLNDYWLE CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VHKTAKVTDVKAVIAQNLHRLRKTMGLPDPAPSNNMGYDGAPGA HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNEEIEAWAKDPRRADTLPFGLYEPRHRKAITGAALVVRGVLYFNGGYTADVRDALIKC CCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FEQYDAAMRTYYQLLEEAAGQKPSKKGPLRWFYAEGMQPMPYDQAPGFARLAKSVSVDKA HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHH FTCAMTSAEDKEATGFFEYTVFCQSDWKAALRIGLDVLDFTVPRAFLVQQPGIFEAMFNA HEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHH FAEALPTVHGHAGLAVNLPPMGREPNEAGEYFYSRRFGPGIDVGNPARLNIRALENQIKT HHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHH VDWLTALSGPLVQAVGGATSLALPPDWFVRQPLGADGSVIQAGVAPESGVSAGPGLPPNA HHHHHHHCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC PAAYVVLNAALRPIVAQTLDTLQSGTINSTAPLLNSAVASDHWLQRFNVPDDRLNDYWLE CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VHKTAKVTDVKAVIAQNLHRLRKTMGLPDPAPSNNMGYDGAPGA HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA