| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027939
Identifier: 238027939
GI number: 238027939
Start: 2619222
End: 2619749
Strand: Direct
Name: 238027939
Synonym: bglu_1g23840
Alternate gene names: NA
Gene position: 2619222-2619749 (Clockwise)
Preceding gene: 238027938
Following gene: 238027940
Centisome position: 67.05
GC content: 60.23
Gene sequence:
>528_bases ATGGGTTTTGCATTTATTCGCGAAGGCGACACGACCTCGCACGGGGGGCGCGTATTGGCCTGTTCGCCAGAAAACAAGTC AGACGGGGTCCCTCTTGCGCTCTTGGGCGACAAGGTGTCGTGCCCCAAGTGTGGGGGGATCTATCCAATCGTCGGGGTCA AAAATCTCGGCGTGACGTTCGATGGTCGGCCCGTAGCATCCGAGGGCGATACGACCGCTTGCGGCGCCACTCTCATCGCA TCGCAGAACAACACCACTGCTGAACCTACGTCCGGTCCCGGTGCCACTGTCGGCGGTGGAAAGAGCGTTGTGTCCGAGAG CAACACGCAAACGCCCTACCGTGGGCGCTTTCAAGTTCTCGACGACATCACGCGCCAGCCGGTTGCAGGTCATCCGTACA CAATCAGATCATCCGACGGGCGAACCCTCGAGGGGAAGACGGACGCCAACGGTTTCACGGAGTGGCTCGAAGGGCAAGAG GCGTCGTCGCTGATGTTCAGTCACCCAGGGAGTGAGAACGAGGTATGA
Upstream 100 bases:
>100_bases TCCCACACCGCCCCGACACCTGTCAACGTTGGCAGGCTGGCTCGGGGAAAACCCGCTGTGCTACATTCCTCCGACTAAAA AATGAGAGAGGGCACAGAAG
Downstream 100 bases:
>100_bases GCGGCTATTCGCCCGGCACTTCGTCCGGGGGTACAACCGGGGGGGCCGGTCGGACGACAGAGGTCGGTCTCATCAAGAAC CTGCCACCCGATGAGCAAGC
Product: PAAR repeat-containing protein
Products: NA
Alternate protein names: PAAR Motif Family; Bacteriophage; PAAR Motif Family Protein; PaaR Motif-Containing Protein; Paar Repeat-Containing Protein; Paar Motif Family Protein; Paar Motif Family
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTFDGRPVASEGDTTACGATLIA SQNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVLDDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQE ASSLMFSHPGSENEV
Sequences:
>Translated_175_residues MGFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTFDGRPVASEGDTTACGATLIA SQNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVLDDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQE ASSLMFSHPGSENEV >Mature_174_residues GFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTFDGRPVASEGDTTACGATLIAS QNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVLDDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQEA SSLMFSHPGSENEV
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18136; Mature: 18005
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTF CCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEE DGRPVASEGDTTACGATLIASQNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVL CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHH DDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQEASSLMFSHPGSENEV HHHHCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCC >Mature Secondary Structure GFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTF CEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEE DGRPVASEGDTTACGATLIASQNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVL CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHH DDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQEASSLMFSHPGSENEV HHHHCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA