| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mrpA [H]
Identifier: 238027858
GI number: 238027858
Start: 2499693
End: 2500673
Strand: Direct
Name: mrpA [H]
Synonym: bglu_1g22890
Alternate gene names: 238027858
Gene position: 2499693-2500673 (Clockwise)
Preceding gene: 238027853
Following gene: 238027859
Centisome position: 63.99
GC content: 61.67
Gene sequence:
>981_bases ATGCCACTATCATCTATCACACTTCTCTACGTCTTTTCTTGGAGCGGCATCGACATGAATTTCGATCGGGGCCTTTGGGG TCCGGAGAACAAGATTGTCTGCGTCGAACTCAATCGGTCCGGCCTCCTCTCCAATGAAGAACTGCGCGCCGACACGCTCT ATTACCGGCAGGTGCTGAGCAAGCGCGACTGGCACGGCTATGGCATCTGGGGCCGCTGGCTGGTGGCACGGATGCGGCGC CATCCGGCGCTGGCCGCCTGCCTGTGCCGCCCCGTGCGCTGGCTCGCAAGCGATTCGGCTCACCAGCTCGGACTGTCCAG CCGGCCGCATCTTGGCGGCATGCTCGTTCGCCGGCTCTGTTTCCTGCCCGCCTGCCGTCTCGTCGGCGCCCTAGCGGCGC CGGATCGCCGTCACGGCAGGCTCTCGTCCATTGCTTGGCCCGCTTCACTCTCAACTCGGCACCTTCTCATGAACACGTAC TCGCTCCATCCCGTTGCGGGCGCGCTGCTCGCGCTGGCGGTTTCGACCTCGGCCCATGCGTTCGACGGCACCGTCAATTT CAACGGCAACGTCGTCGACGCACCGTGCACGATTTCCACCGACGGAAAAAATCTCCAGGTTTCCATGCAGGACATCAGCA CCGGGGCAGTTCTCGATGGCAGTGCTCCGAAAACGCCCTTCAGCATCAAGCTGAACAACTGCTCGACGGCCATTAAGAAA ACCGTCCAGGTGACGTTCAGCGGTACGAAGGCGGGGGACGGCATGCTTGCTCTGACGAGCGAATCGGGCGCGGCAAAGAA TGTCGCCATTCAGCTCTATCAGGACGGCAAGGCGCTGAAACTCGACACGACCTCGGCCTCGGTCAAGCTCAAGACGGGAG ACAACGACATTCCTTTCGCCGCCCAATACACGTCTAACGGCGGCACCCCCGTTGCCGGCAAGGCAAACGCCATCGCGCAG TTCACGCTTTCCTATCCATGA
Upstream 100 bases:
>100_bases AACCGCCGATCCGGGCGACGGTTCCGTCATCCTCATCGGCGGGTCGAAACTTTTCGAAATCCTATGCATATCTTGTCGGC AGCATTCACCGATTATTTAC
Downstream 100 bases:
>100_bases GTTCTAGATGACCGCCCCGCATGCCACACCGCGGCGCGCATCGGCTGCCGCAAGGCGCCTGCCGTATCGCGTCGCCGCCG TCGCGCTGGCGGTGGCGGCG
Product: putative fimbrial major protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPLSSITLLYVFSWSGIDMNFDRGLWGPENKIVCVELNRSGLLSNEELRADTLYYRQVLSKRDWHGYGIWGRWLVARMRR HPALAACLCRPVRWLASDSAHQLGLSSRPHLGGMLVRRLCFLPACRLVGALAAPDRRHGRLSSIAWPASLSTRHLLMNTY SLHPVAGALLALAVSTSAHAFDGTVNFNGNVVDAPCTISTDGKNLQVSMQDISTGAVLDGSAPKTPFSIKLNNCSTAIKK TVQVTFSGTKAGDGMLALTSESGAAKNVAIQLYQDGKALKLDTTSASVKLKTGDNDIPFAAQYTSNGGTPVAGKANAIAQ FTLSYP
Sequences:
>Translated_326_residues MPLSSITLLYVFSWSGIDMNFDRGLWGPENKIVCVELNRSGLLSNEELRADTLYYRQVLSKRDWHGYGIWGRWLVARMRR HPALAACLCRPVRWLASDSAHQLGLSSRPHLGGMLVRRLCFLPACRLVGALAAPDRRHGRLSSIAWPASLSTRHLLMNTY SLHPVAGALLALAVSTSAHAFDGTVNFNGNVVDAPCTISTDGKNLQVSMQDISTGAVLDGSAPKTPFSIKLNNCSTAIKK TVQVTFSGTKAGDGMLALTSESGAAKNVAIQLYQDGKALKLDTTSASVKLKTGDNDIPFAAQYTSNGGTPVAGKANAIAQ FTLSYP >Mature_325_residues PLSSITLLYVFSWSGIDMNFDRGLWGPENKIVCVELNRSGLLSNEELRADTLYYRQVLSKRDWHGYGIWGRWLVARMRRH PALAACLCRPVRWLASDSAHQLGLSSRPHLGGMLVRRLCFLPACRLVGALAAPDRRHGRLSSIAWPASLSTRHLLMNTYS LHPVAGALLALAVSTSAHAFDGTVNFNGNVVDAPCTISTDGKNLQVSMQDISTGAVLDGSAPKTPFSIKLNNCSTAIKKT VQVTFSGTKAGDGMLALTSESGAAKNVAIQLYQDGKALKLDTTSASVKLKTGDNDIPFAAQYTSNGGTPVAGKANAIAQF TLSYP
Specific function: Major structural component of mannose-resistant/proteus- like fimbriae of P.mirabilis [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Fimbrium [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fimbrial protein family [H]
Homologues:
Organism=Escherichia coli, GI87081805, Length=161, Percent_Identity=35.4037267080745, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87082421, Length=150, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081804, Length=153, Percent_Identity=32.6797385620915, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1790769, Length=130, Percent_Identity=36.9230769230769, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008966 - InterPro: IPR000259 - InterPro: IPR014779 [H]
Pfam domain/function: PF00419 Fimbrial [H]
EC number: NA
Molecular weight: Translated: 35049; Mature: 34917
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSSITLLYVFSWSGIDMNFDRGLWGPENKIVCVELNRSGLLSNEELRADTLYYRQVLS CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH KRDWHGYGIWGRWLVARMRRHPALAACLCRPVRWLASDSAHQLGLSSRPHLGGMLVRRLC CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHH FLPACRLVGALAAPDRRHGRLSSIAWPASLSTRHLLMNTYSLHPVAGALLALAVSTSAHA HHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEE FDGTVNFNGNVVDAPCTISTDGKNLQVSMQDISTGAVLDGSAPKTPFSIKLNNCSTAIKK ECCEEECCCCEEECCEEEECCCCEEEEEEEECCCCEEECCCCCCCCEEEEECCHHHHEEE TVQVTFSGTKAGDGMLALTSESGAAKNVAIQLYQDGKALKLDTTSASVKLKTGDNDIPFA EEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEECCCCEEEEEECCCCCCEE AQYTSNGGTPVAGKANAIAQFTLSYP EEEECCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure PLSSITLLYVFSWSGIDMNFDRGLWGPENKIVCVELNRSGLLSNEELRADTLYYRQVLS CCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH KRDWHGYGIWGRWLVARMRRHPALAACLCRPVRWLASDSAHQLGLSSRPHLGGMLVRRLC CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHH FLPACRLVGALAAPDRRHGRLSSIAWPASLSTRHLLMNTYSLHPVAGALLALAVSTSAHA HHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEE FDGTVNFNGNVVDAPCTISTDGKNLQVSMQDISTGAVLDGSAPKTPFSIKLNNCSTAIKK ECCEEECCCCEEECCEEEECCCCEEEEEEEECCCCEEECCCCCCCCEEEEECCHHHHEEE TVQVTFSGTKAGDGMLALTSESGAAKNVAIQLYQDGKALKLDTTSASVKLKTGDNDIPFA EEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEECCCCEEEEEECCCCCCEE AQYTSNGGTPVAGKANAIAQFTLSYP EEEECCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8093447; 7910820 [H]