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The map label for this gene is rbsC [H]

Identifier: 238027823

GI number: 238027823

Start: 2458563

End: 2459543

Strand: Direct

Name: rbsC [H]

Synonym: bglu_1g22540

Alternate gene names: 238027823

Gene position: 2458563-2459543 (Clockwise)

Preceding gene: 238027822

Following gene: 238027824

Centisome position: 62.94

GC content: 72.68

Gene sequence:

>981_bases
ATGACTGAAGCCCGCCCGTCAGCCGTCGCGCGCCTCGGCTCGCCGCGGCGCTTCGCCCTGGTCGGTGCGCTGCTGGCCGT
GATCCTGTTGTTCGCCGTGTTCGTGCCCGGCTTCGCACGGCCCGGCAATCTGGCCGACGTGCTGCTCAACAACTTCGCGC
TGCTCGCGATCGCCGCGCTCGGCATGACGCTCGCCCTGTCGCTGGGCGCCGTCGATCTCTCGCTGGGCAGCGCGATCGAT
CTGGCCAGCCTCGCCTTCGTGCTGCTGTGCGCCCATCACGTGAGCCTGCCGCTCGCGCTCGCGGGCGGCCTGGCCGCGGC
CGCCGCGGTCGGCCTGTTCAACAGCCTGCTGATCGCGCGGATCGGCATCGCGCCGTTCCTCGCCACGCTCGGCACGCTGT
TCATCGGGCAGACCGTCCAGCAGCTGGCCACCGACGGCGGCCAGCCCGTCTACCTGCTGAACCTGGCGCTGCCGCCGCTG
TTCGGCGCGCTCGCGCACGGCAGGCTGGGCGGCGTGCCGGTGCCGCTGCTGATCGTGGCGGTGCTGGGGCTGGCCGTGCA
TGCCGCGCTGGCCTGGTCCAGCTTCGGCCGCGCCGCCGTCGCGTTCGGCGTGCAGCCCGGCGTGGCGCGCCACTCGGGCC
TGCCGGTGGCGGCCATCGTGACGGCCGGCTTCGTGGCCAGCGCACTGGTCTATGGCGTGGTGGGGCTGCTGCTGTCCTCG
ACCGTCAAGGCCTACGTGCCGCTGTCCGGCAACGGCTACCTGCTCAACGCGATCGGCGCCACCTTCATCGGCACCACGCT
GTCGCCGGCGCGGCGACCGAGCGTGCCGGGCACCCTGCTCGGCGTGTTGTTGCTGAGCCTGGTCGCCAACGGCCTGCTGC
TGATCGGCTGGAATTTCTACTGGCAGCAGGTGGCCACCGGCGCACTGATCCTGATGGTGCTCGCGCTCAGCTTCGCCGGG
CGGCGCGGCGCGACGGCCTGA

Upstream 100 bases:

>100_bases
GTGTCGAGCTACTGGGTCAACGGCGTGGAAGGCCTGTTGATCCTGTTCGTGGTCGCGGCCACCGCGCTCGTGCGCCGCCG
CCATGCCGGGAGCCGCGCCC

Downstream 100 bases:

>100_bases
ACCGCGCGCCCGGCCCGCCCTGGCCGGCAAAAAGGCCCGGGCGGCGCAAGCGGCCGCGACGAAGCCGGTCTGCGTGACGC
GCTCCGGTTCGGGTTAACCA

Product: Ribose ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTEARPSAVARLGSPRRFALVGALLAVILLFAVFVPGFARPGNLADVLLNNFALLAIAALGMTLALSLGAVDLSLGSAID
LASLAFVLLCAHHVSLPLALAGGLAAAAAVGLFNSLLIARIGIAPFLATLGTLFIGQTVQQLATDGGQPVYLLNLALPPL
FGALAHGRLGGVPVPLLIVAVLGLAVHAALAWSSFGRAAVAFGVQPGVARHSGLPVAAIVTAGFVASALVYGVVGLLLSS
TVKAYVPLSGNGYLLNAIGATFIGTTLSPARRPSVPGTLLGVLLLSLVANGLLLIGWNFYWQQVATGALILMVLALSFAG
RRGATA

Sequences:

>Translated_326_residues
MTEARPSAVARLGSPRRFALVGALLAVILLFAVFVPGFARPGNLADVLLNNFALLAIAALGMTLALSLGAVDLSLGSAID
LASLAFVLLCAHHVSLPLALAGGLAAAAAVGLFNSLLIARIGIAPFLATLGTLFIGQTVQQLATDGGQPVYLLNLALPPL
FGALAHGRLGGVPVPLLIVAVLGLAVHAALAWSSFGRAAVAFGVQPGVARHSGLPVAAIVTAGFVASALVYGVVGLLLSS
TVKAYVPLSGNGYLLNAIGATFIGTTLSPARRPSVPGTLLGVLLLSLVANGLLLIGWNFYWQQVATGALILMVLALSFAG
RRGATA
>Mature_325_residues
TEARPSAVARLGSPRRFALVGALLAVILLFAVFVPGFARPGNLADVLLNNFALLAIAALGMTLALSLGAVDLSLGSAIDL
ASLAFVLLCAHHVSLPLALAGGLAAAAAVGLFNSLLIARIGIAPFLATLGTLFIGQTVQQLATDGGQPVYLLNLALPPLF
GALAHGRLGGVPVPLLIVAVLGLAVHAALAWSSFGRAAVAFGVQPGVARHSGLPVAAIVTAGFVASALVYGVVGLLLSST
VKAYVPLSGNGYLLNAIGATFIGTTLSPARRPSVPGTLLGVLLLSLVANGLLLIGWNFYWQQVATGALILMVLALSFAGR
RGATA

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=290, Percent_Identity=30.6896551724138, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788896, Length=315, Percent_Identity=31.1111111111111, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI145693152, Length=299, Percent_Identity=28.0936454849498, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082395, Length=304, Percent_Identity=27.6315789473684, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787793, Length=273, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1790524, Length=323, Percent_Identity=24.7678018575851, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1787794, Length=266, Percent_Identity=29.6992481203008, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32825; Mature: 32693

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEARPSAVARLGSPRRFALVGALLAVILLFAVFVPGFARPGNLADVLLNNFALLAIAAL
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
GMTLALSLGAVDLSLGSAIDLASLAFVLLCAHHVSLPLALAGGLAAAAAVGLFNSLLIAR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGIAPFLATLGTLFIGQTVQQLATDGGQPVYLLNLALPPLFGALAHGRLGGVPVPLLIVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHH
VLGLAVHAALAWSSFGRAAVAFGVQPGVARHSGLPVAAIVTAGFVASALVYGVVGLLLSS
HHHHHHHHHHHHHHCCCHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TVKAYVPLSGNGYLLNAIGATFIGTTLSPARRPSVPGTLLGVLLLSLVANGLLLIGWNFY
HHHHEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHH
WQQVATGALILMVLALSFAGRRGATA
HHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TEARPSAVARLGSPRRFALVGALLAVILLFAVFVPGFARPGNLADVLLNNFALLAIAAL
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
GMTLALSLGAVDLSLGSAIDLASLAFVLLCAHHVSLPLALAGGLAAAAAVGLFNSLLIAR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGIAPFLATLGTLFIGQTVQQLATDGGQPVYLLNLALPPLFGALAHGRLGGVPVPLLIVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHH
VLGLAVHAALAWSSFGRAAVAFGVQPGVARHSGLPVAAIVTAGFVASALVYGVVGLLLSS
HHHHHHHHHHHHHHCCCHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TVKAYVPLSGNGYLLNAIGATFIGTTLSPARRPSVPGTLLGVLLLSLVANGLLLIGWNFY
HHHHEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHH
WQQVATGALILMVLALSFAGRRGATA
HHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]