| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027723
Identifier: 238027723
GI number: 238027723
Start: 2330819
End: 2332984
Strand: Direct
Name: 238027723
Synonym: bglu_1g21440
Alternate gene names: NA
Gene position: 2330819-2332984 (Clockwise)
Preceding gene: 238027721
Following gene: 238027737
Centisome position: 59.67
GC content: 69.94
Gene sequence:
>2166_bases ATGTGGAAAACCGTGTCGCGTGCCGCCGGCACGCGCCTCGCACGTGTGCGCCCATGGCATGGGCTGTCGCGGATACCGGC CTGGCTCGCACTGGCCGCGTCGCTGGGCGGCGCCGGCTGCGCGGACCCGGCAGCCCATGCCGGCGCGGCTGCCGGCGTCG CTGCGCCGAAGCTCGAACGCGACAAGGCCGCACTGTTGCGGCAGGAGCAGCAGGCCGCGCGCGCGGTCCCGTCGCTCGCG TCGATCCGGCTCGCGCAGCCGCGCCCGGTCACGCTGCGCGACTCCGGCCAGGCCGGCTCGATCGCGCTGCTGCGCGACGT CGACTTCCGCATCGTCGGCGATCTCGGCTTCTACGTGCACCAGCTGTCCGCCACGCTCGTGCCTGCCCACGCCGGAGCGC CGGTGGTGTTCGACGACCCCTCGAGCTTCGGCATCGACGTGCATCGCGGCATCGTCACGCTCGACGACGCCAAGCTCACG GCCGTATTCGACCGCTACCTGTTCGGCTATCGCAACGCACCGCTGCGCAAGCTGCAGGTGTCGGCGGGCGACGGCGAGAT TCATCTGAAGGGCGAGATGCAGCGCGGCGGCTGGGTGCCCTTCGCGCTGACGGGCAAGCTGTCGGTGCGCGACGGCAGCG AGCTGGTGTTTCATCCGACCGCGATCCGGGTCCAGGGCCTCGACGCGAATCCCGTGATGCGCGCCGCGAACGTCAGGCTG TCGGACCTGCTGAAGATCGACACGCCCGTGGCAAAACTCGTCGGCGACGATCTGGTGATGCAGGTCGACAAGCTGATGCC GCCGCCGCGGCTGAAGCTGACCGTGGTCGCGCTGCGGATCACGCCGGCCGGCCTCGATCTCGCGTTCGACGACGGCACGC AGGCCGGTTTCGCGATGCCCGAAGGCGCGCCGCGCCAGGCGATGCTGATCCGCGGCGGCGACGTGAAGTTCATGCGCTCG ATGCCGATGAATGCCGACATCCTGATCGGCCCGGCGCGCGCGGCGCCGGACGGTGCACCGTTCGTGTTCGACCTCTATCA CTACCGCGAGCAGGTCTCGGCCGGCTATTTCAATTTCTCGCCGAGCGGTGCGATGACGATCCGGATGCCTTCCTATGCGG GACCCAAGCCGCCTGCCGATGCGCTCGGCCCGGCCGGCGCGCGCCTCAACGACAGCTTCATCGAGGCGCAGCAGGCGGCG CTACGCGAGGCGCGCCGGCGCTGGTTCGCGGATGCGTCCGCCGGCGGCGGCGCCCCTTCCGCCTCGCTTGCCGCGGCCTC CGCTCCCGCCGACGAACGCCGAGTCTCGAATCGAGCCACCACGATCCAGCTGCGCAACGTCGACTTCTTCATCACCGGCG CGATCGGTTTCCACGTCGACCAGCTCGACGCCGAGATGGTGCCGCGCCGGCCCGGCGAGCCGGTCGATCTCGACGATCCG AACCAGTACGACATCCGTATCCTCGGCGGCTCGGTGCTCGAACCGTGGCCGGCCATGAACGCGCTGTTCAACGACTATCT GCTCGACTACACGCCGCGCTCGCTCAACGATCTGAAGCTCGCGCCGGACGGCACGCAGCTGCGCGTGACGGGCGGCATCC GGCTCTGGAATCACGTGCCGCCGGGCGTCTGGCTGCCGACCTCGATGACGGGCAGCCTGCGCGTACTCGACGGCCGCCAT ATCGCCTATACGCCGTCGCAGGTGTCGGTGCTCGGCGTGCCGCAGGCAAAGCTGCTGCGCGCGCTCGGCATCGAGCTCGC CTCGCTCACGCCGCTGCGCCGGCGCGGCGCGGAACTGAAGGGCGACTCGCTGGTGCTCGATCAATACACGGTGTTCCCGC CGCCCGTGCTGAACGGACAGCTCGCCGAGGTGCACGTCGAGCCAGGCGGGCTGCGGCTCACGTTCCACCGCGCGAGCAAT GTGCTGCCGAAGCCTGCCGCCGGGGCCGCGACGAGCTACATCTGGATGGAAGGCGGCGACATGAAGATGTTCAACGTGCT CGAAACCAACCTGCGCGCCTTGATCGAGAACACCGCGCAGGCGGGGCCGCTGCGCTTCGACCTCTATGGCTACCGCGAGC AGGTCTCGAAGGGCTCGGTGCGAATGGCAGCCGACGGTACGCTGCTCGTCGATCTCGGCAGGGCCGATCCGCTCGCCGCA CCGTGA
Upstream 100 bases:
>100_bases ACTTGAAAACGATAGTCGGACAAGTCGAACGACACGACACCTCGGGCCGGCGAGCCAGCCCCAGCCGCGCCAGGGCCCGA ACGACAGGGAGACGACCAAT
Downstream 100 bases:
>100_bases GTGAGGCGCGAAAAAGCGCTCGGCCCGCCAGACGCAGTGTTCGTGGCGGGCCGAGCGGATGATGCGCGTGCCGCGCCGAC CGCGCAGCCGCACGTGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MWKTVSRAAGTRLARVRPWHGLSRIPAWLALAASLGGAGCADPAAHAGAAAGVAAPKLERDKAALLRQEQQAARAVPSLA SIRLAQPRPVTLRDSGQAGSIALLRDVDFRIVGDLGFYVHQLSATLVPAHAGAPVVFDDPSSFGIDVHRGIVTLDDAKLT AVFDRYLFGYRNAPLRKLQVSAGDGEIHLKGEMQRGGWVPFALTGKLSVRDGSELVFHPTAIRVQGLDANPVMRAANVRL SDLLKIDTPVAKLVGDDLVMQVDKLMPPPRLKLTVVALRITPAGLDLAFDDGTQAGFAMPEGAPRQAMLIRGGDVKFMRS MPMNADILIGPARAAPDGAPFVFDLYHYREQVSAGYFNFSPSGAMTIRMPSYAGPKPPADALGPAGARLNDSFIEAQQAA LREARRRWFADASAGGGAPSASLAAASAPADERRVSNRATTIQLRNVDFFITGAIGFHVDQLDAEMVPRRPGEPVDLDDP NQYDIRILGGSVLEPWPAMNALFNDYLLDYTPRSLNDLKLAPDGTQLRVTGGIRLWNHVPPGVWLPTSMTGSLRVLDGRH IAYTPSQVSVLGVPQAKLLRALGIELASLTPLRRRGAELKGDSLVLDQYTVFPPPVLNGQLAEVHVEPGGLRLTFHRASN VLPKPAAGAATSYIWMEGGDMKMFNVLETNLRALIENTAQAGPLRFDLYGYREQVSKGSVRMAADGTLLVDLGRADPLAA P
Sequences:
>Translated_721_residues MWKTVSRAAGTRLARVRPWHGLSRIPAWLALAASLGGAGCADPAAHAGAAAGVAAPKLERDKAALLRQEQQAARAVPSLA SIRLAQPRPVTLRDSGQAGSIALLRDVDFRIVGDLGFYVHQLSATLVPAHAGAPVVFDDPSSFGIDVHRGIVTLDDAKLT AVFDRYLFGYRNAPLRKLQVSAGDGEIHLKGEMQRGGWVPFALTGKLSVRDGSELVFHPTAIRVQGLDANPVMRAANVRL SDLLKIDTPVAKLVGDDLVMQVDKLMPPPRLKLTVVALRITPAGLDLAFDDGTQAGFAMPEGAPRQAMLIRGGDVKFMRS MPMNADILIGPARAAPDGAPFVFDLYHYREQVSAGYFNFSPSGAMTIRMPSYAGPKPPADALGPAGARLNDSFIEAQQAA LREARRRWFADASAGGGAPSASLAAASAPADERRVSNRATTIQLRNVDFFITGAIGFHVDQLDAEMVPRRPGEPVDLDDP NQYDIRILGGSVLEPWPAMNALFNDYLLDYTPRSLNDLKLAPDGTQLRVTGGIRLWNHVPPGVWLPTSMTGSLRVLDGRH IAYTPSQVSVLGVPQAKLLRALGIELASLTPLRRRGAELKGDSLVLDQYTVFPPPVLNGQLAEVHVEPGGLRLTFHRASN VLPKPAAGAATSYIWMEGGDMKMFNVLETNLRALIENTAQAGPLRFDLYGYREQVSKGSVRMAADGTLLVDLGRADPLAA P >Mature_721_residues MWKTVSRAAGTRLARVRPWHGLSRIPAWLALAASLGGAGCADPAAHAGAAAGVAAPKLERDKAALLRQEQQAARAVPSLA SIRLAQPRPVTLRDSGQAGSIALLRDVDFRIVGDLGFYVHQLSATLVPAHAGAPVVFDDPSSFGIDVHRGIVTLDDAKLT AVFDRYLFGYRNAPLRKLQVSAGDGEIHLKGEMQRGGWVPFALTGKLSVRDGSELVFHPTAIRVQGLDANPVMRAANVRL SDLLKIDTPVAKLVGDDLVMQVDKLMPPPRLKLTVVALRITPAGLDLAFDDGTQAGFAMPEGAPRQAMLIRGGDVKFMRS MPMNADILIGPARAAPDGAPFVFDLYHYREQVSAGYFNFSPSGAMTIRMPSYAGPKPPADALGPAGARLNDSFIEAQQAA LREARRRWFADASAGGGAPSASLAAASAPADERRVSNRATTIQLRNVDFFITGAIGFHVDQLDAEMVPRRPGEPVDLDDP NQYDIRILGGSVLEPWPAMNALFNDYLLDYTPRSLNDLKLAPDGTQLRVTGGIRLWNHVPPGVWLPTSMTGSLRVLDGRH IAYTPSQVSVLGVPQAKLLRALGIELASLTPLRRRGAELKGDSLVLDQYTVFPPPVLNGQLAEVHVEPGGLRLTFHRASN VLPKPAAGAATSYIWMEGGDMKMFNVLETNLRALIENTAQAGPLRFDLYGYREQVSKGSVRMAADGTLLVDLGRADPLAA P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77330; Mature: 77330
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKTVSRAAGTRLARVRPWHGLSRIPAWLALAASLGGAGCADPAAHAGAAAGVAAPKLER CCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCH DKAALLRQEQQAARAVPSLASIRLAQPRPVTLRDSGQAGSIALLRDVDFRIVGDLGFYVH HHHHHHHHHHHHHHHCCCHHHEEECCCCCEEEECCCCCCCEEEEECCCEEEEEHHHHHHH QLSATLVPAHAGAPVVFDDPSSFGIDVHRGIVTLDDAKLTAVFDRYLFGYRNAPLRKLQV HHHHEEEECCCCCCEEEECCCCCCEEEECCEEEECCCHHHHHHHHHHHHCCCCCCEEEEE SAGDGEIHLKGEMQRGGWVPFALTGKLSVRDGSELVFHPTAIRVQGLDANPVMRAANVRL ECCCCEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEECEEEEEECCCCCCCHHHHCCCH SDLLKIDTPVAKLVGDDLVMQVDKLMPPPRLKLTVVALRITPAGLDLAFDDGTQAGFAMP HHHHCCCCHHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCC EGAPRQAMLIRGGDVKFMRSMPMNADILIGPARAAPDGAPFVFDLYHYREQVSAGYFNFS CCCCCEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHCCCEEEEC PSGAMTIRMPSYAGPKPPADALGPAGARLNDSFIEAQQAALREARRRWFADASAGGGAPS CCCEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ASLAAASAPADERRVSNRATTIQLRNVDFFITGAIGFHVDQLDAEMVPRRPGEPVDLDDP CCCEECCCCCHHHHHCCCEEEEEEECCEEEEEEEEEEEEECCCHHHCCCCCCCCCCCCCC NQYDIRILGGSVLEPWPAMNALFNDYLLDYTPRSLNDLKLAPDGTQLRVTGGIRLWNHVP CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCEEEECCCC PGVWLPTSMTGSLRVLDGRHIAYTPSQVSVLGVPQAKLLRALGIELASLTPLRRRGAELK CCEEECCCCCCCEEEEECCEEEECCCCEEEEECCHHHHHHHHCCHHHHCCHHHHCCCCCC GDSLVLDQYTVFPPPVLNGQLAEVHVEPGGLRLTFHRASNVLPKPAAGAATSYIWMEGGD CCEEEEECEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCC MKMFNVLETNLRALIENTAQAGPLRFDLYGYREQVSKGSVRMAADGTLLVDLGRADPLAA EEEHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCEEEEECCEEEEEECCCCCCCC P C >Mature Secondary Structure MWKTVSRAAGTRLARVRPWHGLSRIPAWLALAASLGGAGCADPAAHAGAAAGVAAPKLER CCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCH DKAALLRQEQQAARAVPSLASIRLAQPRPVTLRDSGQAGSIALLRDVDFRIVGDLGFYVH HHHHHHHHHHHHHHHCCCHHHEEECCCCCEEEECCCCCCCEEEEECCCEEEEEHHHHHHH QLSATLVPAHAGAPVVFDDPSSFGIDVHRGIVTLDDAKLTAVFDRYLFGYRNAPLRKLQV HHHHEEEECCCCCCEEEECCCCCCEEEECCEEEECCCHHHHHHHHHHHHCCCCCCEEEEE SAGDGEIHLKGEMQRGGWVPFALTGKLSVRDGSELVFHPTAIRVQGLDANPVMRAANVRL ECCCCEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEECEEEEEECCCCCCCHHHHCCCH SDLLKIDTPVAKLVGDDLVMQVDKLMPPPRLKLTVVALRITPAGLDLAFDDGTQAGFAMP HHHHCCCCHHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCC EGAPRQAMLIRGGDVKFMRSMPMNADILIGPARAAPDGAPFVFDLYHYREQVSAGYFNFS CCCCCEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHCCCEEEEC PSGAMTIRMPSYAGPKPPADALGPAGARLNDSFIEAQQAALREARRRWFADASAGGGAPS CCCEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ASLAAASAPADERRVSNRATTIQLRNVDFFITGAIGFHVDQLDAEMVPRRPGEPVDLDDP CCCEECCCCCHHHHHCCCEEEEEEECCEEEEEEEEEEEEECCCHHHCCCCCCCCCCCCCC NQYDIRILGGSVLEPWPAMNALFNDYLLDYTPRSLNDLKLAPDGTQLRVTGGIRLWNHVP CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCEEEECCCC PGVWLPTSMTGSLRVLDGRHIAYTPSQVSVLGVPQAKLLRALGIELASLTPLRRRGAELK CCEEECCCCCCCEEEEECCEEEECCCCEEEEECCHHHHHHHHCCHHHHCCHHHHCCCCCC GDSLVLDQYTVFPPPVLNGQLAEVHVEPGGLRLTFHRASNVLPKPAAGAATSYIWMEGGD CCEEEEECEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCC MKMFNVLETNLRALIENTAQAGPLRFDLYGYREQVSKGSVRMAADGTLLVDLGRADPLAA EEEHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCEEEEECCEEEEEECCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA