Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027710

Identifier: 238027710

GI number: 238027710

Start: 2318056

End: 2318382

Strand: Direct

Name: 238027710

Synonym: bglu_1g21310

Alternate gene names: NA

Gene position: 2318056-2318382 (Clockwise)

Preceding gene: 238027709

Following gene: 238027711

Centisome position: 59.34

GC content: 63.61

Gene sequence:

>327_bases
ATGAAGCACAAACCGATGCTGATGTTGCTGCTGTGCGTGATGCTGGCGGCCTGCAAGACGGTGCCGACGCCGTCAATCGA
GCAATCGCTCGCACCCGTTCATACCCTGGTACCGACCGTTGATTGCGGCGAGGACAATCCCGATGCCGAACTTCCTGACT
ACCCTGCTGCGCCGTCTGTCGAGACGCTCGACAATCTCCGCGCCTATTCCCGAACCCAGCAACTCTGGGCCGTCCGCGCC
GCCGGCGTCGTCGCAGACGAGCACACCCTACGCCGAACCACCCGAGACTGCCTCAACGCCCTCCGCGCCCGCGGTCTCAT
CAACTGA

Upstream 100 bases:

>100_bases
GAAAACACGCAGGCTGTCGAAGTCGCCAACCGGGCCGGCGCGCTGTCGGCCGACGAAGCGCGGGCCGCGCGCGCGAACAC
CGAACAGGAGCTGGCCGCCA

Downstream 100 bases:

>100_bases
ACCAGAAGGAACGACAGCCATGATCTCCCTCACCGCAATCGCCAGCGCCATCGTCTCTGGCGCCACCGCAATCGAAACCG
CCATCAGCGACGTCGCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKHKPMLMLLLCVMLAACKTVPTPSIEQSLAPVHTLVPTVDCGEDNPDAELPDYPAAPSVETLDNLRAYSRTQQLWAVRA
AGVVADEHTLRRTTRDCLNALRARGLIN

Sequences:

>Translated_108_residues
MKHKPMLMLLLCVMLAACKTVPTPSIEQSLAPVHTLVPTVDCGEDNPDAELPDYPAAPSVETLDNLRAYSRTQQLWAVRA
AGVVADEHTLRRTTRDCLNALRARGLIN
>Mature_108_residues
MKHKPMLMLLLCVMLAACKTVPTPSIEQSLAPVHTLVPTVDCGEDNPDAELPDYPAAPSVETLDNLRAYSRTQQLWAVRA
AGVVADEHTLRRTTRDCLNALRARGLIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11849; Mature: 11849

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKPMLMLLLCVMLAACKTVPTPSIEQSLAPVHTLVPTVDCGEDNPDAELPDYPAAPSV
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
ETLDNLRAYSRTQQLWAVRAAGVVADEHTLRRTTRDCLNALRARGLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKHKPMLMLLLCVMLAACKTVPTPSIEQSLAPVHTLVPTVDCGEDNPDAELPDYPAAPSV
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
ETLDNLRAYSRTQQLWAVRAAGVVADEHTLRRTTRDCLNALRARGLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA