Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027698

Identifier: 238027698

GI number: 238027698

Start: 2307391

End: 2308095

Strand: Direct

Name: 238027698

Synonym: bglu_1g21190

Alternate gene names: NA

Gene position: 2307391-2308095 (Clockwise)

Preceding gene: 238027697

Following gene: 238027699

Centisome position: 59.07

GC content: 64.4

Gene sequence:

>705_bases
ATGCCGCTCCCGAATCTCCCGGTCCCCGACTTCCCGAACGTTCCGCCTCTGCCCGGCGTGCCGGCTCTGCCGCGCGCGCC
CGGCGAGTCGCTGGGCTCGTTCGCGATCAGCACTGTGCTCTCCGACGCGGTCAGCTTCCTGCAATCGATCTTCCGGCCGC
AGTGGGGCATCTTCGACAGCACTGGCGCACCGGTCGCGCCGGCTGACACCGCCCTGTCGATCGAGTACCGCGGCGACTCG
CACATCTCCGGCTACCCGCAGGAGGAAGGCGGTTTTGCTGCCTACAACAAGGTGCAGGCGCCCTACGAGGCGCGCGTGCA
GCTCGTGTGCTCAAAATCGGAAGCGCAGCGACAGGAATTCCTTGCGCAGATCGAGGCGGCCAAGCAGTCGACCATGCTAT
TTCGCGTCGTGACGCCGGATGCCGTCTACGAAAACGCAAACGTCATCTCGTACAACTATCGACGCACGTCGCGCGCGGGT
GTGACGTTGCTCGTGGTCGAAGTGTTCGTCGAGGAAGTCCGGCAGACGGTGACAGCTCAATACGCGAACACCAAGAATCC
GAGCGCCTCCGATCCGATCAGCCTGGGTCAGGTCCAGGTGCAGCCGCCCTCGGCCGGGCAGGCCGCGCTGTTCGGTCCGG
TGTCCGTGGTGGGTGGAACGTCGAATTCGGTCAATCAGTTGATCCAATCAAGCGGGGTGCAATGA

Upstream 100 bases:

>100_bases
CTCAGGCTACTGATGCCGCCGGCATCGCGCGTGACATCGGCAGCGCGCTCAAGCGCTACAACTTCACCGTGGCCCAGGCC
AACACCGGATCGTTCTGACC

Downstream 100 bases:

>100_bases
TGCAGATCATCCCGCTTTCCGCTGTGCCCTCGCAGAAGCTGAGCGTGATGCTCGCTCAGCAGAACTGCCAGATCGCCGTC
TACCAGACGACAACGGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPLPNLPVPDFPNVPPLPGVPALPRAPGESLGSFAISTVLSDAVSFLQSIFRPQWGIFDSTGAPVAPADTALSIEYRGDS
HISGYPQEEGGFAAYNKVQAPYEARVQLVCSKSEAQRQEFLAQIEAAKQSTMLFRVVTPDAVYENANVISYNYRRTSRAG
VTLLVVEVFVEEVRQTVTAQYANTKNPSASDPISLGQVQVQPPSAGQAALFGPVSVVGGTSNSVNQLIQSSGVQ

Sequences:

>Translated_234_residues
MPLPNLPVPDFPNVPPLPGVPALPRAPGESLGSFAISTVLSDAVSFLQSIFRPQWGIFDSTGAPVAPADTALSIEYRGDS
HISGYPQEEGGFAAYNKVQAPYEARVQLVCSKSEAQRQEFLAQIEAAKQSTMLFRVVTPDAVYENANVISYNYRRTSRAG
VTLLVVEVFVEEVRQTVTAQYANTKNPSASDPISLGQVQVQPPSAGQAALFGPVSVVGGTSNSVNQLIQSSGVQ
>Mature_233_residues
PLPNLPVPDFPNVPPLPGVPALPRAPGESLGSFAISTVLSDAVSFLQSIFRPQWGIFDSTGAPVAPADTALSIEYRGDSH
ISGYPQEEGGFAAYNKVQAPYEARVQLVCSKSEAQRQEFLAQIEAAKQSTMLFRVVTPDAVYENANVISYNYRRTSRAGV
TLLVVEVFVEEVRQTVTAQYANTKNPSASDPISLGQVQVQPPSAGQAALFGPVSVVGGTSNSVNQLIQSSGVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24895; Mature: 24764

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPNLPVPDFPNVPPLPGVPALPRAPGESLGSFAISTVLSDAVSFLQSIFRPQWGIFDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TGAPVAPADTALSIEYRGDSHISGYPQEEGGFAAYNKVQAPYEARVQLVCSKSEAQRQEF
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHEEEEECCHHHHHHHH
LAQIEAAKQSTMLFRVVTPDAVYENANVISYNYRRTSRAGVTLLVVEVFVEEVRQTVTAQ
HHHHHHHHHCEEEEEEECCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
YANTKNPSASDPISLGQVQVQPPSAGQAALFGPVSVVGGTSNSVNQLIQSSGVQ
HCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCEEEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
PLPNLPVPDFPNVPPLPGVPALPRAPGESLGSFAISTVLSDAVSFLQSIFRPQWGIFDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TGAPVAPADTALSIEYRGDSHISGYPQEEGGFAAYNKVQAPYEARVQLVCSKSEAQRQEF
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHEEEEECCHHHHHHHH
LAQIEAAKQSTMLFRVVTPDAVYENANVISYNYRRTSRAGVTLLVVEVFVEEVRQTVTAQ
HHHHHHHHHCEEEEEEECCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
YANTKNPSASDPISLGQVQVQPPSAGQAALFGPVSVVGGTSNSVNQLIQSSGVQ
HCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCEEEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA