| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is flgJ [C]
Identifier: 238027697
GI number: 238027697
Start: 2305409
End: 2307388
Strand: Direct
Name: flgJ [C]
Synonym: bglu_1g21180
Alternate gene names: 238027697
Gene position: 2305409-2307388 (Clockwise)
Preceding gene: 238027696
Following gene: 238027698
Centisome position: 59.01
GC content: 65.61
Gene sequence:
>1980_bases GTGGCAACCATCGTCGACGCGCTCGTCGTCACTCTCGGCCTCGACGCGGCCGCTTTCAAGCGCAGCAAGGCCGAGGCCAG CCAGGCCACCAAGAAGCTCACCGCGGAGGAGCTGGCCGCGGCCAAGAAGATCGAGGCGAACAACAAGATCGCCGCCGAAT CGTTCAAGCGCGTGCGCACCGAAGTCTTGGCGCTCGTCGGCCTGTTCACCGCCGGCCTCGGCTTGACCGCCTTCACCGTC AACACCATCAAGACCGCAGCCGCGCTCGACCGCATGTCGAACAACCTCGGCATGAGCGCGCGCGACCTCGCGTCGTGGCA GCTCGCCGCGCGCAACGCCGGCAGCAGCGCGGAGGGCATCACTGCAGCGTTGGCGGAGTCGCAGAACGAGATCGCCCGGA TGCGCTTCACCGGACCATCGGAGGGCATGCAATGGTTCTTCCGTCTGGGCGGAAAAACCGAAGACCTGAAGGACGGCAAC ACCTACCTGCTCGCGCGCTCGCGCATCATCGCGAACATGTTCAAGGTGGACCCGGGCCGGGCGCGCTTCATCGCGCAGCA AATGGGGATCAGCGACGACGCGTTCAACCTGCTCAAGCAAGGCCCGGAGGCCGTCCAGCGCTACCGCGACCAGCAGGCCG CCCTGGCCGATGAGATGGCGCGCGCCGCGCCGCCGGCCGAAGCCCTGCGCAAGCAGTTCGACCTGCTTGAGACGAAGCTC CAGAGCGTGGGCGTCGCGGTGCTCACCGATCTCATGCCGATGTTCGAACGTCTGCTACGCCAGCTCGACAGCATGGCTAC GTGGGTATCGGATCACAAAGAGGACATCAATCAGTGGGTCGACAATGCCGTCAAGGCCGTCGGACGCTTCATCGAATGGG CGGACAGGGCAGCTGATTCGGTGGGCGGATGGAAAAACGTGCTGGCAGGGTTGCTCGCACTGAAGATTCTCTCGATCGTC GCGCCACTCCTCCAACTTGGCGCCGCATTAGCTGGTGTCGGCGCCGGACTCGGGTTGATCGGACGCGTCGGCGTAGCCGG CGTCGCGGTGATGGCGGCTCTCTGGGCCGCAAAGAAGCTGGGGCTGCCCGACGTCGACGCGCAGAAGGGCATCGACGACG TGCGCCGCGGAGACTTCCTTGCAGCCTCCACCCATTTGCCGGCCATGGACCTGATTCGAGCCTTTGCGGCGCGAATGGGC GGCAAGTCGAACGAGGACATCGCGAAGGATCTCGAATCGAGTCTCGGTGCGTCGAAATCCGGTGACGACGGTTTCGCCCA GCAGATCGCCGCCCTGCTCTCGGGAACCGCCAACGCGGCAGAGCCTAGCGAGAACGGCATCCCCGCCGATCTCGCGCGCA AGGCTGGGCCGGCGGCCGTGGCTGCTGCGCTGCGCACTCAGCAGCTCTACGGCGTGCCCGCTGCTGTGACGCTCGCGCAG TACGGCTTGGAGAGCGGTTTCGGCTCGAAGATGCCGCCCGGCAGCAACAACCCCTTCGGCATCCACGCGCGTGCTGGTCA GGCATCAGTTATGGGCTATGACTGGGACGCCTCCGGCAACCGCGTGCCGACGAAATTCGCGAAGTACGCGTCCATCGATG AGGCATTCGAGGCGCACGGCAAGCTTCTGGCAACCGGCTCGGCCTACGCGGCCGCCCGCCGCAACCAGGGCGACCCACTC GCCTATGCGATGGCGCTTACCGGCACATACGCTACCGATCCGCAGTACGGCCAAAAGCTCGCCGCGATGATGGGCATGGG AGGCGCCAACGCCTACCAGATCGCGCAGCAGACCGCAGCCGTGGCGCGCTCTGGAGGTCGCGAGAGCGGCTCAACTTCGA TGTCCACTTCCGAGACGAATATCGGATCGATCAACGTCAACTCTCAGGCTACTGATGCCGCCGGCATCGCGCGTGACATC GGCAGCGCGCTCAAGCGCTACAACTTCACCGTGGCCCAGGCCAACACCGGATCGTTCTGA
Upstream 100 bases:
>100_bases TGAACACCGTCTACGGCCAGGATGACCTGCATGACCTGCTCGAAATAATCGCCGTCGACAGCTACAACGAGCGCGTCGCG GCAGAACGGAGGAACTGACC
Downstream 100 bases:
>100_bases CCATGCCGCTCCCGAATCTCCCGGTCCCCGACTTCCCGAACGTTCCGCCTCTGCCCGGCGTGCCGGCTCTGCCGCGCGCG CCCGGCGAGTCGCTGGGCTC
Product: mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
Products: NA
Alternate protein names: Transglycosylase SLT Domain Protein; Phage Related Tail Protein; Phage Glucosaminidase
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MATIVDALVVTLGLDAAAFKRSKAEASQATKKLTAEELAAAKKIEANNKIAAESFKRVRTEVLALVGLFTAGLGLTAFTV NTIKTAAALDRMSNNLGMSARDLASWQLAARNAGSSAEGITAALAESQNEIARMRFTGPSEGMQWFFRLGGKTEDLKDGN TYLLARSRIIANMFKVDPGRARFIAQQMGISDDAFNLLKQGPEAVQRYRDQQAALADEMARAAPPAEALRKQFDLLETKL QSVGVAVLTDLMPMFERLLRQLDSMATWVSDHKEDINQWVDNAVKAVGRFIEWADRAADSVGGWKNVLAGLLALKILSIV APLLQLGAALAGVGAGLGLIGRVGVAGVAVMAALWAAKKLGLPDVDAQKGIDDVRRGDFLAASTHLPAMDLIRAFAARMG GKSNEDIAKDLESSLGASKSGDDGFAQQIAALLSGTANAAEPSENGIPADLARKAGPAAVAAALRTQQLYGVPAAVTLAQ YGLESGFGSKMPPGSNNPFGIHARAGQASVMGYDWDASGNRVPTKFAKYASIDEAFEAHGKLLATGSAYAAARRNQGDPL AYAMALTGTYATDPQYGQKLAAMMGMGGANAYQIAQQTAAVARSGGRESGSTSMSTSETNIGSINVNSQATDAAGIARDI GSALKRYNFTVAQANTGSF
Sequences:
>Translated_659_residues MATIVDALVVTLGLDAAAFKRSKAEASQATKKLTAEELAAAKKIEANNKIAAESFKRVRTEVLALVGLFTAGLGLTAFTV NTIKTAAALDRMSNNLGMSARDLASWQLAARNAGSSAEGITAALAESQNEIARMRFTGPSEGMQWFFRLGGKTEDLKDGN TYLLARSRIIANMFKVDPGRARFIAQQMGISDDAFNLLKQGPEAVQRYRDQQAALADEMARAAPPAEALRKQFDLLETKL QSVGVAVLTDLMPMFERLLRQLDSMATWVSDHKEDINQWVDNAVKAVGRFIEWADRAADSVGGWKNVLAGLLALKILSIV APLLQLGAALAGVGAGLGLIGRVGVAGVAVMAALWAAKKLGLPDVDAQKGIDDVRRGDFLAASTHLPAMDLIRAFAARMG GKSNEDIAKDLESSLGASKSGDDGFAQQIAALLSGTANAAEPSENGIPADLARKAGPAAVAAALRTQQLYGVPAAVTLAQ YGLESGFGSKMPPGSNNPFGIHARAGQASVMGYDWDASGNRVPTKFAKYASIDEAFEAHGKLLATGSAYAAARRNQGDPL AYAMALTGTYATDPQYGQKLAAMMGMGGANAYQIAQQTAAVARSGGRESGSTSMSTSETNIGSINVNSQATDAAGIARDI GSALKRYNFTVAQANTGSF >Mature_658_residues ATIVDALVVTLGLDAAAFKRSKAEASQATKKLTAEELAAAKKIEANNKIAAESFKRVRTEVLALVGLFTAGLGLTAFTVN TIKTAAALDRMSNNLGMSARDLASWQLAARNAGSSAEGITAALAESQNEIARMRFTGPSEGMQWFFRLGGKTEDLKDGNT YLLARSRIIANMFKVDPGRARFIAQQMGISDDAFNLLKQGPEAVQRYRDQQAALADEMARAAPPAEALRKQFDLLETKLQ SVGVAVLTDLMPMFERLLRQLDSMATWVSDHKEDINQWVDNAVKAVGRFIEWADRAADSVGGWKNVLAGLLALKILSIVA PLLQLGAALAGVGAGLGLIGRVGVAGVAVMAALWAAKKLGLPDVDAQKGIDDVRRGDFLAASTHLPAMDLIRAFAARMGG KSNEDIAKDLESSLGASKSGDDGFAQQIAALLSGTANAAEPSENGIPADLARKAGPAAVAAALRTQQLYGVPAAVTLAQY GLESGFGSKMPPGSNNPFGIHARAGQASVMGYDWDASGNRVPTKFAKYASIDEAFEAHGKLLATGSAYAAARRNQGDPLA YAMALTGTYATDPQYGQKLAAMMGMGGANAYQIAQQTAAVARSGGRESGSTSMSTSETNIGSINVNSQATDAAGIARDIG SALKRYNFTVAQANTGSF
Specific function: Flagellum-Specific Muramidase Which Hydrolyzes The Peptidoglycan Layer To Assemble The Rod Structure In The Periplasmic Space (By Similarity). [C]
COG id: COG1705
COG function: function code NU; Muramidase (flagellum-specific)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 69018; Mature: 68887
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIVDALVVTLGLDAAAFKRSKAEASQATKKLTAEELAAAKKIEANNKIAAESFKRVRT CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EVLALVGLFTAGLGLTAFTVNTIKTAAALDRMSNNLGMSARDLASWQLAARNAGSSAEGI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHH TAALAESQNEIARMRFTGPSEGMQWFFRLGGKTEDLKDGNTYLLARSRIIANMFKVDPGR HHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCH ARFIAQQMGISDDAFNLLKQGPEAVQRYRDQQAALADEMARAAPPAEALRKQFDLLETKL HHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QSVGVAVLTDLMPMFERLLRQLDSMATWVSDHKEDINQWVDNAVKAVGRFIEWADRAADS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGWKNVLAGLLALKILSIVAPLLQLGAALAGVGAGLGLIGRVGVAGVAVMAALWAAKKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLPDVDAQKGIDDVRRGDFLAASTHLPAMDLIRAFAARMGGKSNEDIAKDLESSLGASKS CCCCCCHHCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC GDDGFAQQIAALLSGTANAAEPSENGIPADLARKAGPAAVAAALRTQQLYGVPAAVTLAQ CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH YGLESGFGSKMPPGSNNPFGIHARAGQASVMGYDWDASGNRVPTKFAKYASIDEAFEAHG HHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC KLLATGSAYAAARRNQGDPLAYAMALTGTYATDPQYGQKLAAMMGMGGANAYQIAQQTAA CEEECCCHHHHHHCCCCCCCEEHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH VARSGGRESGSTSMSTSETNIGSINVNSQATDAAGIARDIGSALKRYNFTVAQANTGSF HHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCC >Mature Secondary Structure ATIVDALVVTLGLDAAAFKRSKAEASQATKKLTAEELAAAKKIEANNKIAAESFKRVRT HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EVLALVGLFTAGLGLTAFTVNTIKTAAALDRMSNNLGMSARDLASWQLAARNAGSSAEGI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHH TAALAESQNEIARMRFTGPSEGMQWFFRLGGKTEDLKDGNTYLLARSRIIANMFKVDPGR HHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCH ARFIAQQMGISDDAFNLLKQGPEAVQRYRDQQAALADEMARAAPPAEALRKQFDLLETKL HHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QSVGVAVLTDLMPMFERLLRQLDSMATWVSDHKEDINQWVDNAVKAVGRFIEWADRAADS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGWKNVLAGLLALKILSIVAPLLQLGAALAGVGAGLGLIGRVGVAGVAVMAALWAAKKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLPDVDAQKGIDDVRRGDFLAASTHLPAMDLIRAFAARMGGKSNEDIAKDLESSLGASKS CCCCCCHHCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC GDDGFAQQIAALLSGTANAAEPSENGIPADLARKAGPAAVAAALRTQQLYGVPAAVTLAQ CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH YGLESGFGSKMPPGSNNPFGIHARAGQASVMGYDWDASGNRVPTKFAKYASIDEAFEAHG HHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC KLLATGSAYAAARRNQGDPLAYAMALTGTYATDPQYGQKLAAMMGMGGANAYQIAQQTAA CEEECCCHHHHHHCCCCCCCEEHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH VARSGGRESGSTSMSTSETNIGSINVNSQATDAAGIARDIGSALKRYNFTVAQANTGSF HHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA