| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027692
Identifier: 238027692
GI number: 238027692
Start: 2302298
End: 2302855
Strand: Direct
Name: 238027692
Synonym: bglu_1g21130
Alternate gene names: NA
Gene position: 2302298-2302855 (Clockwise)
Preceding gene: 238027691
Following gene: 238027693
Centisome position: 58.93
GC content: 59.68
Gene sequence:
>558_bases ATGGCCGTCACCATCTCCCTCACTGAATCGGACGTCTACGCGGCGCTGCGCATCTTCCTGCTCGGCGTGCTGCCCACCGG CGTCGAGGTCGTGAAGGCTCAGGACAACGGCGTCGGCGAGCCGGTCGGCGCGGACTTCGTCACGATCAACTCGATCGCCG CGCCGCGGCTCGCGACGAACGTCGTCACCTATGACGACCCGGTGGGCGCCGGCGGCAGCGGGCCCGGCACGCGCAGCGCC ATGCAGGCAATCCAGATGCGCCTGCAGCTCGACGTCCACGGCCCGAACTCGGCCGACAACGCGGCGATCATCTCGACGCT GTTTCGCGACGAATACGCATGCGTTGCAATCGGCACCGTCAATTCAAATATTCAACCGTTGTATTGCGAAAATCCCCGTC AAATGCCGTTTATTAACGGGGAAAACCAATATGAGCAGCGTTGGATAATTGAACTGGCTCTGCAATACAATCCAATCACG CAATCGCCGCAGGATTTTTTCGACGAAATCACACCAGAAATCGTCAATGTCGACGCGGCATATCCTCCCGGAGCTTAA
Upstream 100 bases:
>100_bases ACCTGCAGGGCACCACGTGGCGCGTCGTGCAGGTGCTCGAGACGTGGGCCGACTGGTGCGCGCTGGCCGTGCAACTGCAG AACGTCTCGGCGAACTGACG
Downstream 100 bases:
>100_bases GTCATGTCGATCCCGGCATCCGTCATCGCGTCAGCAACCCCGAGCGTCATCAGCGCGGGCGGCACAGCGCTCGATCTCGT CGGGATTATCCTGACGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MAVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATNVVTYDDPVGAGGSGPGTRSA MQAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTVNSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPIT QSPQDFFDEITPEIVNVDAAYPPGA
Sequences:
>Translated_185_residues MAVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATNVVTYDDPVGAGGSGPGTRSA MQAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTVNSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPIT QSPQDFFDEITPEIVNVDAAYPPGA >Mature_184_residues AVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATNVVTYDDPVGAGGSGPGTRSAM QAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTVNSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPITQ SPQDFFDEITPEIVNVDAAYPPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19872; Mature: 19740
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATN CEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHEE VVTYDDPVGAGGSGPGTRSAMQAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTV EEEECCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEEC NSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPITQSPQDFFDEITPEIVNVDAA CCCCCEEEECCCCCCCEECCCCCHHHEEEEEEEEECCCCCCCHHHHHHHCCHHEEEECCC YPPGA CCCCC >Mature Secondary Structure AVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATN EEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHEE VVTYDDPVGAGGSGPGTRSAMQAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTV EEEECCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEEC NSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPITQSPQDFFDEITPEIVNVDAA CCCCCEEEECCCCCCCEECCCCCHHHEEEEEEEEECCCCCCCHHHHHHHCCHHEEEECCC YPPGA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA