Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027661

Identifier: 238027661

GI number: 238027661

Start: 2271013

End: 2272149

Strand: Direct

Name: 238027661

Synonym: bglu_1g20820

Alternate gene names: NA

Gene position: 2271013-2272149 (Clockwise)

Preceding gene: 238027660

Following gene: 238027674

Centisome position: 58.13

GC content: 64.56

Gene sequence:

>1137_bases
ATGACGCCCCGCCGCCGAAAGAGCCCAGATGGGCTCCCGAGCCGCGTCTACATTCGCGACGGGTCGTTCTATTGGGTCCG
GCCGGACAGCAACAAGTGGATCCGGCTATGCCGCGTCAGCGAGGGCGACGCGCTGATGCTCGAGCGCCTGGCCGCTGAGA
AGCGCCAGTTCACGGCGGCCGCCGGTGGCGGCAACCTGCCCAGGCTGGTCGGCGAATTCATGGACACGCACAAGATGCGC
TACGCCCCATCCTTCCGCGACGAGTGGGTGCGTCGCGGCGAGGCGGTAATCGAATCGCTCTGCGAGTGGAACGTCGAGCG
CGTCGACGCTGGAGCCGTCGAGGACTTCCTCATGAAGAACTGGGCGGACCGGCTGCCAATGCAGCGGGCGATGAAAGCGT
GGCTGTCGACGTTCTTCAACTGGATCATCCGCCGGAAGAAACTGATGCAGGTGAACCCCTGCCGCGAGGTCATCGTCAAG
AAGCCGAAGGCCCGCGACGTCTACATCCCGGACCGGGATTTCGTCGCCATTCGCGATGCGCTGATGACCTACACCTACAC
GAAGAACGCCGGCACGCCGAAGGAGAAGACCTTGGTCGGTAAGGTACAGACGGGGCCGATGATGCAGTGCTTCATCGACC
TCTGCTACCTGACCTGCCAGCGCTCGACGGACATCCGGCTGCTGCGGTGGGACCAGATCGACAGGGATGCCGGCGTTATC
CACTTCGTGCCGACGAAGACGGAGGATTCGAGCGGCGAGGCCGTGGACTGGCCCCTGACGCCCGATATCGAGGCGGTGCT
GGCGCGCGCGAAGCTGCTGGACCCGGCTTTCGGGCAGACCTACGTTATCCGGGACAGGAAAGGCAAACCGAAGACGGATC
AGTCGTGCCGCGACGCGTGGGACGGGGCGATCGATCGCGTCGCCAAGCTCGACCCGAGCATCGCGGGTAAACCCTACACG
ATCAAGGATATTCGCGCGAAGGCGCTGACGGACGCGAAGCGCGCCGGGTATGCAATCGAGGATCTGAGGGTGGCCGGGGC
GCACACGGATACTGCGACGACCGAGACCTACCTGAAGGCGCGGGAGGTACCCCGCTCCAAGGTCGTCCTGCACCTTCCGA
TGCCGAAATCGGCATAA

Upstream 100 bases:

>100_bases
CCCTCGACGCTCTCGCCGAGGCCAAGCTCGGGATTCGGGCTGTCGACCGGCGGATCGATGCGTCGCCCGATCGCCCACCG
ATCCACGTGCTGCGAAAAGC

Downstream 100 bases:

>100_bases
CCTGGGCGGCGATATTGGAGAACCTCCAATATGGTCTCCAATATGCACAAAAAATAGGCACAAACGAAAAACCCGCGTCA
GCCTTAACTGACGCGGGTTT

Product: integrase/recombinase protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase Protein; Integrase; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MTPRRRKSPDGLPSRVYIRDGSFYWVRPDSNKWIRLCRVSEGDALMLERLAAEKRQFTAAAGGGNLPRLVGEFMDTHKMR
YAPSFRDEWVRRGEAVIESLCEWNVERVDAGAVEDFLMKNWADRLPMQRAMKAWLSTFFNWIIRRKKLMQVNPCREVIVK
KPKARDVYIPDRDFVAIRDALMTYTYTKNAGTPKEKTLVGKVQTGPMMQCFIDLCYLTCQRSTDIRLLRWDQIDRDAGVI
HFVPTKTEDSSGEAVDWPLTPDIEAVLARAKLLDPAFGQTYVIRDRKGKPKTDQSCRDAWDGAIDRVAKLDPSIAGKPYT
IKDIRAKALTDAKRAGYAIEDLRVAGAHTDTATTETYLKAREVPRSKVVLHLPMPKSA

Sequences:

>Translated_378_residues
MTPRRRKSPDGLPSRVYIRDGSFYWVRPDSNKWIRLCRVSEGDALMLERLAAEKRQFTAAAGGGNLPRLVGEFMDTHKMR
YAPSFRDEWVRRGEAVIESLCEWNVERVDAGAVEDFLMKNWADRLPMQRAMKAWLSTFFNWIIRRKKLMQVNPCREVIVK
KPKARDVYIPDRDFVAIRDALMTYTYTKNAGTPKEKTLVGKVQTGPMMQCFIDLCYLTCQRSTDIRLLRWDQIDRDAGVI
HFVPTKTEDSSGEAVDWPLTPDIEAVLARAKLLDPAFGQTYVIRDRKGKPKTDQSCRDAWDGAIDRVAKLDPSIAGKPYT
IKDIRAKALTDAKRAGYAIEDLRVAGAHTDTATTETYLKAREVPRSKVVLHLPMPKSA
>Mature_377_residues
TPRRRKSPDGLPSRVYIRDGSFYWVRPDSNKWIRLCRVSEGDALMLERLAAEKRQFTAAAGGGNLPRLVGEFMDTHKMRY
APSFRDEWVRRGEAVIESLCEWNVERVDAGAVEDFLMKNWADRLPMQRAMKAWLSTFFNWIIRRKKLMQVNPCREVIVKK
PKARDVYIPDRDFVAIRDALMTYTYTKNAGTPKEKTLVGKVQTGPMMQCFIDLCYLTCQRSTDIRLLRWDQIDRDAGVIH
FVPTKTEDSSGEAVDWPLTPDIEAVLARAKLLDPAFGQTYVIRDRKGKPKTDQSCRDAWDGAIDRVAKLDPSIAGKPYTI
KDIRAKALTDAKRAGYAIEDLRVAGAHTDTATTETYLKAREVPRSKVVLHLPMPKSA

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43158; Mature: 43027

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRRRKSPDGLPSRVYIRDGSFYWVRPDSNKWIRLCRVSEGDALMLERLAAEKRQFTAA
CCCCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHEEEC
AGGGNLPRLVGEFMDTHKMRYAPSFRDEWVRRGEAVIESLCEWNVERVDAGAVEDFLMKN
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
WADRLPMQRAMKAWLSTFFNWIIRRKKLMQVNPCREVIVKKPKARDVYIPDRDFVAIRDA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCHHHHHHH
LMTYTYTKNAGTPKEKTLVGKVQTGPMMQCFIDLCYLTCQRSTDIRLLRWDQIDRDAGVI
HHHEEEECCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEE
HFVPTKTEDSSGEAVDWPLTPDIEAVLARAKLLDPAFGQTYVIRDRKGKPKTDQSCRDAW
EEECCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHH
DGAIDRVAKLDPSIAGKPYTIKDIRAKALTDAKRAGYAIEDLRVAGAHTDTATTETYLKA
HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHHH
REVPRSKVVLHLPMPKSA
HHCCCCCEEEEECCCCCC
>Mature Secondary Structure 
TPRRRKSPDGLPSRVYIRDGSFYWVRPDSNKWIRLCRVSEGDALMLERLAAEKRQFTAA
CCCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHEEEC
AGGGNLPRLVGEFMDTHKMRYAPSFRDEWVRRGEAVIESLCEWNVERVDAGAVEDFLMKN
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
WADRLPMQRAMKAWLSTFFNWIIRRKKLMQVNPCREVIVKKPKARDVYIPDRDFVAIRDA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCHHHHHHH
LMTYTYTKNAGTPKEKTLVGKVQTGPMMQCFIDLCYLTCQRSTDIRLLRWDQIDRDAGVI
HHHEEEECCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEE
HFVPTKTEDSSGEAVDWPLTPDIEAVLARAKLLDPAFGQTYVIRDRKGKPKTDQSCRDAW
EEECCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHH
DGAIDRVAKLDPSIAGKPYTIKDIRAKALTDAKRAGYAIEDLRVAGAHTDTATTETYLKA
HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHHH
REVPRSKVVLHLPMPKSA
HHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA