| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is insC1 [C]
Identifier: 238027599
GI number: 238027599
Start: 2208920
End: 2209183
Strand: Direct
Name: insC1 [C]
Synonym: bglu_1g20170
Alternate gene names: 238027599
Gene position: 2208920-2209183 (Clockwise)
Preceding gene: 238027596
Following gene: 238027601
Centisome position: 56.54
GC content: 57.58
Gene sequence:
>264_bases ATGAAGAAACGATTCACCGAAGAGCAGATCATTGGTTTCCTGCGCGAGGCGCAGGCCGGCTTGCCGATCAAGGAGCTTTG TCGGCAGCATGGCTTTTCCGAGGCAAGCTACTACCTGTGGCGCAGCAAGTTCGGCGGCGTGAGCGTGTCCGACGCGAAGC GCCTGAAAGAATTGGAGGCCGAAAACAACCGGCTGAAGAAGTTGCTCGCGGAATCGATGCTGGAGAACGAAGTCACCCGG GAGGCGCTGCGAAAAAAGTGGTGA
Upstream 100 bases:
>100_bases AAATTCACTCGCCCCGATCCACGCTCACCTGCCCCGACGTCCCCCCGCCCTTGAGTAGCACGACGCGTTAGCGTCCAATC ACGCAGTCCGGAGATTGGGC
Downstream 100 bases:
>100_bases GCGCACCGTCACACCGAGACCTGGTGCGCCATATGATCTACGGCGGCTTGAGCGAGCGACGTGCGTTGCGGGTGATCGGC ATGAGCGCCAGCGCTTATCG
Product: transposase IS3/IS911
Products: NA
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEAENNRLKKLLAESMLENEVTR EALRKKW
Sequences:
>Translated_87_residues MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEAENNRLKKLLAESMLENEVTR EALRKKW >Mature_87_residues MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEAENNRLKKLLAESMLENEVTR EALRKKW
Specific function: Involved in the transposition of the insertion sequence is2 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 10217; Mature: 10217
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEA CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH ENNRLKKLLAESMLENEVTREALRKKW HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEA CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH ENNRLKKLLAESMLENEVTREALRKKW HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1718819 [H]