| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027501
Identifier: 238027501
GI number: 238027501
Start: 2097413
End: 2098387
Strand: Direct
Name: 238027501
Synonym: bglu_1g19150
Alternate gene names: NA
Gene position: 2097413-2098387 (Clockwise)
Preceding gene: 238027488
Following gene: 238027509
Centisome position: 53.69
GC content: 57.95
Gene sequence:
>975_bases ATGACTATCCGCCATCCCACTCGCGATACCGACATCCTGCGGCTCCTGCAAATGCTAGGCATCGAAGCCTCCCGGATCGT CGAATATCGGCATGGAATTGCGGCACGGAACTTCCACATTGTTTGTATGGACGGTACCACCCGCGTCGTTCGATACGATA CGCGCCGCACGGCCGCCGACATTCGCGAAGACCGCATGCTCGGCACGCTCGCCGTTCGCAACGGAATCAATGCACCCACG GGAAACTGGCTGATCCATGAACTAGGAAACGCCACCGTGGTAATCCGTCAGCACCTGGCCGGAACCACGCTCGCAGAACT TCCCCCCGCCACCTGGCCCGACGCGCGCAGGCTAGGCGAAGTCCTTCGTTCGATTCATGAGTTCCCGCAACCCGTGATCG CACGGAAGTTCTTTTACGCGCCCGTCCTAGATATGCTCGACCGCCAGTGGCAAACGATTCGCGACGCCGTCGCCAGCATC GCGGAGACCGCCGATTTGGCCGCACTGCTGCGCTATGCGCTGCAACAATTCGATCACGCCACCGAAATCGAAACGCTCCG TTTGTCGCCCACCGGGCTCATCCATGGCGACTTCACGCCAGCCAACATACTGATTCACGAGCACGGGCTGACCGTACTAG ATTGGGAAAAATCTTGTATCGGGCCCGTATGTGCCGACATCGCACAATCGCTTTACTACTTTACCGCCCATTCGAGCAAA ATTGGAATCTTCGCAACTTCTTTTCTCGAGGGCTATGGGAAGCCGGACTGGTACAAGCCCGATGTCATCAAAGCCTGGAT GACACTTCATCCCGCGTTCATTCTGCTCACTGATGCGGCCAATACTTTCATCAACCAACGCCTTCCACTCCCTGCCCGCA ATCCGCACCGCGAAGCCTACTTTCGTGACGTTTCGGTTCCACGATACCGCGCCTACCTCGCTCACCAGCGCGACCTGCTC TCCATAGTCTCGTGA
Upstream 100 bases:
>100_bases ACGCGCGGCTTGAACCCTGTAGTCCAGGCTGCGGAGCGTGATCAACAGACGATTCGCATCGGCCACCCGGCTGTTACCCT GACTCATTCGTGCTCACGCG
Downstream 100 bases:
>100_bases TGACCGCCGTTCTCGCTGCCGCGCCTCAATATGGGTTATCCCAAATGTATTCCGGTCCGTCGATCGGCACACCGTCGGCG ATACGCGCAAGCACGTGAAC
Product: putative aminoglycoside phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTIRHPTRDTDILRLLQMLGIEASRIVEYRHGIAARNFHIVCMDGTTRVVRYDTRRTAADIREDRMLGTLAVRNGINAPT GNWLIHELGNATVVIRQHLAGTTLAELPPATWPDARRLGEVLRSIHEFPQPVIARKFFYAPVLDMLDRQWQTIRDAVASI AETADLAALLRYALQQFDHATEIETLRLSPTGLIHGDFTPANILIHEHGLTVLDWEKSCIGPVCADIAQSLYYFTAHSSK IGIFATSFLEGYGKPDWYKPDVIKAWMTLHPAFILLTDAANTFINQRLPLPARNPHREAYFRDVSVPRYRAYLAHQRDLL SIVS
Sequences:
>Translated_324_residues MTIRHPTRDTDILRLLQMLGIEASRIVEYRHGIAARNFHIVCMDGTTRVVRYDTRRTAADIREDRMLGTLAVRNGINAPT GNWLIHELGNATVVIRQHLAGTTLAELPPATWPDARRLGEVLRSIHEFPQPVIARKFFYAPVLDMLDRQWQTIRDAVASI AETADLAALLRYALQQFDHATEIETLRLSPTGLIHGDFTPANILIHEHGLTVLDWEKSCIGPVCADIAQSLYYFTAHSSK IGIFATSFLEGYGKPDWYKPDVIKAWMTLHPAFILLTDAANTFINQRLPLPARNPHREAYFRDVSVPRYRAYLAHQRDLL SIVS >Mature_323_residues TIRHPTRDTDILRLLQMLGIEASRIVEYRHGIAARNFHIVCMDGTTRVVRYDTRRTAADIREDRMLGTLAVRNGINAPTG NWLIHELGNATVVIRQHLAGTTLAELPPATWPDARRLGEVLRSIHEFPQPVIARKFFYAPVLDMLDRQWQTIRDAVASIA ETADLAALLRYALQQFDHATEIETLRLSPTGLIHGDFTPANILIHEHGLTVLDWEKSCIGPVCADIAQSLYYFTAHSSKI GIFATSFLEGYGKPDWYKPDVIKAWMTLHPAFILLTDAANTFINQRLPLPARNPHREAYFRDVSVPRYRAYLAHQRDLLS IVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36739; Mature: 36608
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRHPTRDTDILRLLQMLGIEASRIVEYRHGIAARNFHIVCMDGTTRVVRYDTRRTAAD CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCEECCEEEEEECCCCEEEEECCHHHHHH IREDRMLGTLAVRNGINAPTGNWLIHELGNATVVIRQHLAGTTLAELPPATWPDARRLGE HHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEHHHCCCHHHHCCCCCCHHHHHHHH VLRSIHEFPQPVIARKFFYAPVLDMLDRQWQTIRDAVASIAETADLAALLRYALQQFDHA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TEIETLRLSPTGLIHGDFTPANILIHEHGLTVLDWEKSCIGPVCADIAQSLYYFTAHSSK CCCEEEEECCCEEEECCCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCC IGIFATSFLEGYGKPDWYKPDVIKAWMTLHPAFILLTDAANTFINQRLPLPARNPHREAY CHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHCCCCCCCCCCCHHHH FRDVSVPRYRAYLAHQRDLLSIVS HHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIRHPTRDTDILRLLQMLGIEASRIVEYRHGIAARNFHIVCMDGTTRVVRYDTRRTAAD CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCEECCEEEEEECCCCEEEEECCHHHHHH IREDRMLGTLAVRNGINAPTGNWLIHELGNATVVIRQHLAGTTLAELPPATWPDARRLGE HHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEHHHCCCHHHHCCCCCCHHHHHHHH VLRSIHEFPQPVIARKFFYAPVLDMLDRQWQTIRDAVASIAETADLAALLRYALQQFDHA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TEIETLRLSPTGLIHGDFTPANILIHEHGLTVLDWEKSCIGPVCADIAQSLYYFTAHSSK CCCEEEEECCCEEEECCCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCC IGIFATSFLEGYGKPDWYKPDVIKAWMTLHPAFILLTDAANTFINQRLPLPARNPHREAY CHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHCCCCCCCCCCCHHHH FRDVSVPRYRAYLAHQRDLLSIVS HHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA