| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is dnaC [C]
Identifier: 238027488
GI number: 238027488
Start: 2077452
End: 2078318
Strand: Direct
Name: dnaC [C]
Synonym: bglu_1g18980
Alternate gene names: 238027488
Gene position: 2077452-2078318 (Clockwise)
Preceding gene: 238027487
Following gene: 238027501
Centisome position: 53.18
GC content: 65.17
Gene sequence:
>867_bases ATGAACAGCATGCCTGCCTCGACACTGGAGCGCATCCGACGCTATCTCGTCGGCCTGCGCATGCCGCGCGCGCTCGAAAC GCTGGATGCCACCCTGAACCGCTTCGAGCAAGGCGACAGTTCGATGCTCGAAGTGCTGGAAACGTTGCTGGGCGAGGAGT TCACGACACGCGAAACACGCCGCATCCGGATGGCGCTGCAGACCGCGCGGCTCGGCACGATCAAGACGCTGGCCGGCTAC GACTTCAGCTTCCAGCCGAGCCTGGATCGCGATCGCATCATGACGCTTGCGCAACTCGAGTTCATCGAACGACGGCAGAC CGTTCACTTCCTGGGGCCGCCCGGCACGGGCAAATCGCACCTGTCCATTGCGCTGGGCGTGGAAGCCGTACGCGCGGGCA AGAGCGTCTACTTCGGCTCTCTGGCCGAGATCGTGAACTCGATGGCCAAGGCCGAACGGGAAGGCAACCTGGCGCAGCGC GTGCGCTTCCTTGCCCGTAACAGCCTGCTCATCGTCGACGAGATCGGCTACCTGCCCATCGGCTCCAACGGCGGCAATCT GTTCTTCCAGCTCGTCAACGCCTGCTACGAGCGCTGCGCGATCATCCTGACGTCCAACCGCAGCTTCGGTGAATGGGGTG ACGTGTTCGGCGACAGCGTGGTGGCCGCGGCGTTGCTCGACCGGCTGCTGCACCACGCGATCGTCGTGCAGATCGAAGGC ACATCGTACCGCCTGCGAGAACACGCCGATCTGCTGCCGGACCATCTGCGCAACCGTCCGTCTTCCCTGAACCCCGTGCC CGCTGAACCGGCTCGCCGGCGCCCGGGCCGCCCCCGAAGGAACCCATTCGATCACGTCGCCGGCTGA
Upstream 100 bases:
>100_bases CACGGCACCCCGTGCCATCGGTGACGGCGAGCGTGGCTCGCCGGCCCCTGTCGTTCTATGACCAGGTCGCAAGACGTCTC GCAGAAGCCGGGAGGACCGC
Downstream 100 bases:
>100_bases TCACCGTCCGAACAGGGTGGGGAATTTTACTTCGACACTTCTGGGGAAATTACGTCCGACGTTGACACCTACATTCACGA AGCATTCCTCAAACTTGGCT
Product: DNA replication protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNSMPASTLERIRRYLVGLRMPRALETLDATLNRFEQGDSSMLEVLETLLGEEFTTRETRRIRMALQTARLGTIKTLAGY DFSFQPSLDRDRIMTLAQLEFIERRQTVHFLGPPGTGKSHLSIALGVEAVRAGKSVYFGSLAEIVNSMAKAEREGNLAQR VRFLARNSLLIVDEIGYLPIGSNGGNLFFQLVNACYERCAIILTSNRSFGEWGDVFGDSVVAAALLDRLLHHAIVVQIEG TSYRLREHADLLPDHLRNRPSSLNPVPAEPARRRPGRPRRNPFDHVAG
Sequences:
>Translated_288_residues MNSMPASTLERIRRYLVGLRMPRALETLDATLNRFEQGDSSMLEVLETLLGEEFTTRETRRIRMALQTARLGTIKTLAGY DFSFQPSLDRDRIMTLAQLEFIERRQTVHFLGPPGTGKSHLSIALGVEAVRAGKSVYFGSLAEIVNSMAKAEREGNLAQR VRFLARNSLLIVDEIGYLPIGSNGGNLFFQLVNACYERCAIILTSNRSFGEWGDVFGDSVVAAALLDRLLHHAIVVQIEG TSYRLREHADLLPDHLRNRPSSLNPVPAEPARRRPGRPRRNPFDHVAG >Mature_288_residues MNSMPASTLERIRRYLVGLRMPRALETLDATLNRFEQGDSSMLEVLETLLGEEFTTRETRRIRMALQTARLGTIKTLAGY DFSFQPSLDRDRIMTLAQLEFIERRQTVHFLGPPGTGKSHLSIALGVEAVRAGKSVYFGSLAEIVNSMAKAEREGNLAQR VRFLARNSLLIVDEIGYLPIGSNGGNLFFQLVNACYERCAIILTSNRSFGEWGDVFGDSVVAAALLDRLLHHAIVVQIEG TSYRLREHADLLPDHLRNRPSSLNPVPAEPARRRPGRPRRNPFDHVAG
Specific function: This Protein Is Required For Chromosomal Replication. It Forms, In Concert With DNAb Protein And Other Prepriming Proteins DNAt, N, N', N'' A Prepriming Protein Complex On The Specific Site Of The Template DNA Recognized By Protein N'. [C]
COG id: COG1484
COG function: function code L; DNA replication protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR001270 - InterPro: IPR002611 [H]
Pfam domain/function: PF01695 IstB [H]
EC number: NA
Molecular weight: Translated: 32225; Mature: 32225
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSMPASTLERIRRYLVGLRMPRALETLDATLNRFEQGDSSMLEVLETLLGEEFTTRETR CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH RIRMALQTARLGTIKTLAGYDFSFQPSLDRDRIMTLAQLEFIERRQTVHFLGPPGTGKSH HHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCC LSIALGVEAVRAGKSVYFGSLAEIVNSMAKAEREGNLAQRVRFLARNSLLIVDEIGYLPI EEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCEEE GSNGGNLFFQLVNACYERCAIILTSNRSFGEWGDVFGDSVVAAALLDRLLHHAIVVQIEG CCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECC TSYRLREHADLLPDHLRNRPSSLNPVPAEPARRRPGRPRRNPFDHVAG CCHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSMPASTLERIRRYLVGLRMPRALETLDATLNRFEQGDSSMLEVLETLLGEEFTTRETR CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH RIRMALQTARLGTIKTLAGYDFSFQPSLDRDRIMTLAQLEFIERRQTVHFLGPPGTGKSH HHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCC LSIALGVEAVRAGKSVYFGSLAEIVNSMAKAEREGNLAQRVRFLARNSLLIVDEIGYLPI EEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCEEE GSNGGNLFFQLVNACYERCAIILTSNRSFGEWGDVFGDSVVAAALLDRLLHHAIVVQIEG CCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECC TSYRLREHADLLPDHLRNRPSSLNPVPAEPARRRPGRPRRNPFDHVAG CCHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8382825 [H]