Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is yghU [H]

Identifier: 238027436

GI number: 238027436

Start: 2012694

End: 2013398

Strand: Direct

Name: yghU [H]

Synonym: bglu_1g18390

Alternate gene names: 238027436

Gene position: 2012694-2013398 (Clockwise)

Preceding gene: 238027435

Following gene: 238027440

Centisome position: 51.52

GC content: 68.51

Gene sequence:

>705_bases
ATGAGCGACCTGTCCGCGTTCCCGATCACGAAAAAATGGCCGGCGCAGCACCCGGACCGCCTCCAGCTCTACTCGCTGCC
CACGCCGAACGGCGTGAAGGTGTCGATCATGCTGGAGGAAATCGGCCTGCCCTACGAGCCGCACCTGGTGCGCTTCGACA
CGAACGACCAGCTCTCCCCCGAATTCCTCTCGCTGAACCCGAACAACAAGATTCCCGCGCTGATCGACCCGGACGGCCCC
GGCGGCCAACCGATCGGCCTGTTCGAATCGGGCGCGATCCTGCTCTATCTGGCCGAGAAGACCGGCAAGCTGATCCCGGC
CGACGCGGCCGGCCGCTACCAGACCATCCAGTGGCTGATGTTCCAGATGGGCGGCATCGGCCCGATGTTCGGGCAGCTCG
GCTTCTTCCACAAGTTCGCGGGGCGCGACTACGAGGACAAGCGCCCGCGCGATCGCTACGTCGGCGAGGCGAAGCGCCTG
CTCGGCGTGCTGGAGGCGCGGCTCGCCTCGAACGCCTGGATCGCCGGCGCCGACTACACGATCGCCGACATCGCCACCTT
CCCGTGGGTGCGCAACCTGGTGGGCTTCTACGAGGCGGGCGAGCTGGTCGAGTTCGAGCGCTTCCCGAACCTCGGGCGCG
CGCTCGAGGCGTTCCTCGCGCGCCCGGCCGTGCAGCGCGGCCTGGCGATCCCGGCGCGCGACTGA

Upstream 100 bases:

>100_bases
GCGGCCGCCCGCGCTCGATGCGCTCGGCGTGGCGCCCCGGCGGCGGGCTTCGGCGCTTGCGTATACCATCGCCTAACCCT
CCACTCTCACCGAGCGCCCC

Downstream 100 bases:

>100_bases
GCGCACGACTGAACGCTCGGGCGGGCGCCGCCGCTCGTCCGGCCGCCCCGCTTCCGGCGCCTGCCCACGGCTGCCCGCCT
CACCTGCGCGGCGCGGCTCA

Product: glutathione S-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSPEFLSLNPNNKIPALIDPDGP
GGQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLMFQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRL
LGVLEARLASNAWIAGADYTIADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD

Sequences:

>Translated_234_residues
MSDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSPEFLSLNPNNKIPALIDPDGP
GGQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLMFQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRL
LGVLEARLASNAWIAGADYTIADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD
>Mature_233_residues
SDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSPEFLSLNPNNKIPALIDPDGPG
GQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLMFQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRLL
GVLEARLASNAWIAGADYTIADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI87082195, Length=224, Percent_Identity=43.75, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1788640, Length=209, Percent_Identity=41.6267942583732, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI87081789, Length=206, Percent_Identity=28.6407766990291, Blast_Score=62, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324100, Length=267, Percent_Identity=32.2097378277154, Blast_Score=110, Evalue=3e-25,
Organism=Drosophila melanogaster, GI17864592, Length=198, Percent_Identity=29.2929292929293, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17933730, Length=202, Percent_Identity=29.7029702970297, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI17864594, Length=199, Percent_Identity=30.1507537688442, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17864598, Length=206, Percent_Identity=30.0970873786408, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45549270, Length=202, Percent_Identity=29.2079207920792, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28571670, Length=178, Percent_Identity=27.5280898876405, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 26015; Mature: 25884

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSP
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCEEEEECCCCCCCC
EFLSLNPNNKIPALIDPDGPGGQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLM
CEEEECCCCCCCEEECCCCCCCCCCEEECCCEEEEEEECCCCCEECCCCCCCHHHHHHHH
FQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRLLGVLEARLASNAWIAGADYT
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCH
IADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD
HHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHHCHHHHHCCCCCCCC
>Mature Secondary Structure 
SDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSP
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCEEEEECCCCCCCC
EFLSLNPNNKIPALIDPDGPGGQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLM
CEEEECCCCCCCEEECCCCCCCCCCEEECCCEEEEEEECCCCCEECCCCCCCHHHHHHHH
FQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRLLGVLEARLASNAWIAGADYT
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCH
IADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD
HHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHHCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]