| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027421
Identifier: 238027421
GI number: 238027421
Start: 1997203
End: 1997631
Strand: Reverse
Name: 238027421
Synonym: bglu_1g18240
Alternate gene names: NA
Gene position: 1997631-1997203 (Counterclockwise)
Preceding gene: 238027422
Following gene: 238027419
Centisome position: 51.14
GC content: 69.0
Gene sequence:
>429_bases ATGATCCAACAGGCAGTCCGGCTCGCATCGGCCGGCGTGGCGCTGGCCGCATCGGCCGCGTTGCTGTCGCCCGTCGCGCA CGCGGCCGGGCCGGCAGTCAAGAAGGTCAAGCTGCTCGAACTCTATTCGCGCTATGCGCACGACGGCCAGTCGGTCACCG GCCTGCCCGAGTATGGCGACGGCAAGCGCATCCTGTTTACGGCGGTGGTGGTCGAGCAGTCGCAAGGATTGGTCGGCAAT ACGCTGCTGGTGGCGGCCGACCCGTCGCAGCCCGACGAGCCGCTCGCGCGCCTGACCGGCTACGACGAGAAGGAGGCGCG GAAGATGGCGGCGCTGCCGGCGGGCGCGAAGTTCAGCGCGATTTGCGCGCTCGCGCTCACCTCGGGCTCGGACTTCCTGG CGCTGCATGACTGCGTGGTGAAGCCTTGA
Upstream 100 bases:
>100_bases CGCCTCGCGCCGCTCGCAACGACGGCGCCCGGGCCGCGCTGCCGCCGCCGGCGCGCGCGGCGTCCGGCCAGAACGACATC CATCCGCTGAGAGAACAACC
Downstream 100 bases:
>100_bases GCGCGCCGCCGAGGTGCCGCTTGGCCGCCGTGCTGGGCGGCGTGGTGCTGGCCTGCGCGGCGCCGGCCGGCCATGCGGCC GCCAAGGCCGACCCGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MIQQAVRLASAGVALAASAALLSPVAHAAGPAVKKVKLLELYSRYAHDGQSVTGLPEYGDGKRILFTAVVVEQSQGLVGN TLLVAADPSQPDEPLARLTGYDEKEARKMAALPAGAKFSAICALALTSGSDFLALHDCVVKP
Sequences:
>Translated_142_residues MIQQAVRLASAGVALAASAALLSPVAHAAGPAVKKVKLLELYSRYAHDGQSVTGLPEYGDGKRILFTAVVVEQSQGLVGN TLLVAADPSQPDEPLARLTGYDEKEARKMAALPAGAKFSAICALALTSGSDFLALHDCVVKP >Mature_142_residues MIQQAVRLASAGVALAASAALLSPVAHAAGPAVKKVKLLELYSRYAHDGQSVTGLPEYGDGKRILFTAVVVEQSQGLVGN TLLVAADPSQPDEPLARLTGYDEKEARKMAALPAGAKFSAICALALTSGSDFLALHDCVVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14669; Mature: 14669
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQQAVRLASAGVALAASAALLSPVAHAAGPAVKKVKLLELYSRYAHDGQSVTGLPEYGD CHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GKRILFTAVVVEQSQGLVGNTLLVAADPSQPDEPLARLTGYDEKEARKMAALPAGAKFSA CCEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHH ICALALTSGSDFLALHDCVVKP HEEEEECCCCCEEEECCEECCC >Mature Secondary Structure MIQQAVRLASAGVALAASAALLSPVAHAAGPAVKKVKLLELYSRYAHDGQSVTGLPEYGD CHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GKRILFTAVVVEQSQGLVGNTLLVAADPSQPDEPLARLTGYDEKEARKMAALPAGAKFSA CCEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHH ICALALTSGSDFLALHDCVVKP HEEEEECCCCCEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA