Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is gluP [H]

Identifier: 238027400

GI number: 238027400

Start: 1972592

End: 1973839

Strand: Reverse

Name: gluP [H]

Synonym: bglu_1g17960

Alternate gene names: 238027400

Gene position: 1973839-1972592 (Counterclockwise)

Preceding gene: 238027401

Following gene: 238027399

Centisome position: 50.53

GC content: 69.47

Gene sequence:

>1248_bases
ATGCAACAGGTATCGAGGGCCGGCGCGGCGCCGGCCGGCACGACCGAACGCAGGCGCGACTGGCGCACCGCGTTGCTGCT
GGTGACGAGCCTCTTTTTCATGTGGGGCCTGTCGTATGGGCTGCTCGACGTGCTCAACAAGCATTTCCAGGACGTGCTGC
ATGTCAGCAAGGCGGAGTCCGGCCTGCTGCAGGGCGCCTATTTCGGCGCCTACTTCGTGATGGCGATACCGGCCGCGCTG
CTGATGGAGCGCTTCGGCTACAAGCGCGGCATCCTGCTCGGCCTCACGCTCTACGCGATCGGCGCGCTGCTGTTCATTCC
GGCCTCGGCGGCGGCGAGCTTTCCGTTCTTCCTGTTCGCGCTGTTCGTGATCGCCGCCGGGCTGGGCTGCCTCGAGACCG
CCGCGAACCCCTACGTGACCGAACTCGGCGCGCCCGAGACCGCCGAGCGCCGGCTCAACCTCTCGCAGTCGTTCAACGGG
CTGGGCAGCTTCCTCGGGCCGCTGATCGGCGGCGCGTTCTTCTTCCAGGCGGCTTCGCCGGGCGAGAGCGCCGAGGCCGG
GCTCGGTTCGGTACGGGTGACCTACGTGGTGATCGCGGTGGTGGTGGTATTGCTCGCGCTGCTGATCGCGCGCACCCCGA
TGCCCGACATCCGCCAAGCCGCCTCGCCCGCGCAGCGCGCGGCCGGCGCCTCGCTCTGGTCGCGCCCGCACTTCGTCGGC
GGGATCGCCGCGCAGTTCTTCTACGTGGCCGCGCAGGTGGGCGTGGGCGCGTTCTTCATCAACTATGCGATCGTCCACTG
GCCGGCGCTGAGCGCCCAGCGCGCCTCGTTCCTGCTGTCGGTGGCGCTGTTGCTGTTCATGGCCGGGCGCTTCGTCAGCA
CCGCGCTGATGGGGCGAATCTCGCCCGCCGCGCTGCTGAGCGTCTACGCACTCGCCAACGTGGCGCTGAGCGCGGTGGTG
CTGGCCGGCATCCCGGTGGTCTCGGTGCTGGCGCTGATCGCCATGTTCTTCTTCATGTCGATCATGTTTCCGACCATCTT
CGCGCTCGGCGTGAAGGACCTCGGGCCGCAGACCAAGCGCGGGGCGTCGTACCAGGTGATGTCGGTCGTCGGCGGCGCGA
TCATGCCGTATGCGATGGGACGCGTGGCCGACGGCGCGGGGGTGGGCGCGGCCTATCTGCTGCCGCTCCTGTGCTTCGCG
ATCGTGGCGTGGTACGGCTGGCGCGGCAGCCGCGTGGCCGGCGCGTGA

Upstream 100 bases:

>100_bases
ATGGTGCGCATCTTCGATCTCGCGCAGCAGTGACGCGGCGCGCCGCGCGCGCGGCCGGCACGGCAATCGACCGGAACGGA
TCAGCAAGGAGACAGGCAAC

Downstream 100 bases:

>100_bases
GCCGCGCGGCGGCAGGCTGCCGGGCGCGCTCGGCAGCCTGCGCCAACAGGTTAGAATCGCCGTCCGGTTCACGTTCGCCC
GCCCGGCCGGCGGCGGGCGG

Product: L-fucose transporter

Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MQQVSRAGAAPAGTTERRRDWRTALLLVTSLFFMWGLSYGLLDVLNKHFQDVLHVSKAESGLLQGAYFGAYFVMAIPAAL
LMERFGYKRGILLGLTLYAIGALLFIPASAAASFPFFLFALFVIAAGLGCLETAANPYVTELGAPETAERRLNLSQSFNG
LGSFLGPLIGGAFFFQAASPGESAEAGLGSVRVTYVVIAVVVVLLALLIARTPMPDIRQAASPAQRAAGASLWSRPHFVG
GIAAQFFYVAAQVGVGAFFINYAIVHWPALSAQRASFLLSVALLLFMAGRFVSTALMGRISPAALLSVYALANVALSAVV
LAGIPVVSVLALIAMFFFMSIMFPTIFALGVKDLGPQTKRGASYQVMSVVGGAIMPYAMGRVADGAGVGAAYLLPLLCFA
IVAWYGWRGSRVAGA

Sequences:

>Translated_415_residues
MQQVSRAGAAPAGTTERRRDWRTALLLVTSLFFMWGLSYGLLDVLNKHFQDVLHVSKAESGLLQGAYFGAYFVMAIPAAL
LMERFGYKRGILLGLTLYAIGALLFIPASAAASFPFFLFALFVIAAGLGCLETAANPYVTELGAPETAERRLNLSQSFNG
LGSFLGPLIGGAFFFQAASPGESAEAGLGSVRVTYVVIAVVVVLLALLIARTPMPDIRQAASPAQRAAGASLWSRPHFVG
GIAAQFFYVAAQVGVGAFFINYAIVHWPALSAQRASFLLSVALLLFMAGRFVSTALMGRISPAALLSVYALANVALSAVV
LAGIPVVSVLALIAMFFFMSIMFPTIFALGVKDLGPQTKRGASYQVMSVVGGAIMPYAMGRVADGAGVGAAYLLPLLCFA
IVAWYGWRGSRVAGA
>Mature_415_residues
MQQVSRAGAAPAGTTERRRDWRTALLLVTSLFFMWGLSYGLLDVLNKHFQDVLHVSKAESGLLQGAYFGAYFVMAIPAAL
LMERFGYKRGILLGLTLYAIGALLFIPASAAASFPFFLFALFVIAAGLGCLETAANPYVTELGAPETAERRLNLSQSFNG
LGSFLGPLIGGAFFFQAASPGESAEAGLGSVRVTYVVIAVVVVLLALLIARTPMPDIRQAASPAQRAAGASLWSRPHFVG
GIAAQFFYVAAQVGVGAFFINYAIVHWPALSAQRASFLLSVALLLFMAGRFVSTALMGRISPAALLSVYALANVALSAVV
LAGIPVVSVLALIAMFFFMSIMFPTIFALGVKDLGPQTKRGASYQVMSVVGGAIMPYAMGRVADGAGVGAAYLLPLLCFA
IVAWYGWRGSRVAGA

Specific function: Intake of glucose and galactose (Potential) [H]

COG id: COG0738

COG function: function code G; Fucose permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]

Homologues:

Organism=Escherichia coli, GI1789166, Length=421, Percent_Identity=37.7672209026128, Blast_Score=258, Evalue=4e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005964
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43748; Mature: 43748

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVSRAGAAPAGTTERRRDWRTALLLVTSLFFMWGLSYGLLDVLNKHFQDVLHVSKAES
CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLQGAYFGAYFVMAIPAALLMERFGYKRGILLGLTLYAIGALLFIPASAAASFPFFLFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LFVIAAGLGCLETAANPYVTELGAPETAERRLNLSQSFNGLGSFLGPLIGGAFFFQAASP
HHHHHHCCHHHHHCCCCCHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GESAEAGLGSVRVTYVVIAVVVVLLALLIARTPMPDIRQAASPAQRAAGASLWSRPHFVG
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCHHHHCCCCHHH
GIAAQFFYVAAQVGVGAFFINYAIVHWPALSAQRASFLLSVALLLFMAGRFVSTALMGRI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPAALLSVYALANVALSAVVLAGIPVVSVLALIAMFFFMSIMFPTIFALGVKDLGPQTKR
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GASYQVMSVVGGAIMPYAMGRVADGAGVGAAYLLPLLCFAIVAWYGWRGSRVAGA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]

General reaction: Permease [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9168605 [H]