| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027357
Identifier: 238027357
GI number: 238027357
Start: 1924125
End: 1924622
Strand: Direct
Name: 238027357
Synonym: bglu_1g17470
Alternate gene names: NA
Gene position: 1924125-1924622 (Clockwise)
Preceding gene: 238027356
Following gene: 238027358
Centisome position: 49.25
GC content: 63.86
Gene sequence:
>498_bases ATGCTGCTCTCTCTCGGACAATTCGTTTTCGGCACACTCACGGCGCCGTTTAGCGAAATGCAGCGTCGCCGCACGTGGAA GTTCGCGAGCAATTCGCGCGTCGGCGCGCGCGATGCGCGTCAGTTCGCGGGGCCGGGCGACGACACGTTCACGATGCAAG GCATGATCGCAACGGGGGTGCTCGGCTCGCCTATCTCGATGGACCTGATTTCCGAGATGGCGAACACGGGCGATGCGTAC GTGCTGGTGGATGGGCGCGGCGTCGTCTACGGTGCATACGTGATAGACGAGCTACACGAAACGCACTCGTATTTCACGAT CCTCGGCGTGCCGCAGAAAATCGAATTCACGCTGACGATCACGCGCGTGGACGATCGCGCACTCGCGGCGTCGGTTGACG GCGGCGCCGCGACGAGCGAGCCGACGACTGGATCGCTCGACAAGGCACCGGCCGGGGCGACGCCGCCCTACGTCAAGCCG AAAGCGAAGAAGGGGTAG
Upstream 100 bases:
>100_bases AACGTGAAGGAATTCGAGGCAGCCGTGCGCCGTGTGATTGATCAGGTCGAGCGCGAGGATCGTCGTCGCGTCAGCTCGCG CCTGTCCGACTGAGGCCGCC
Downstream 100 bases:
>100_bases GGCGATGGCGGATTTTGTGCAATCGGCCAAGCTGCCGACGCGGCGACTCGTCCCATACGCTGATTACCGCATCACCCTCG ACGGGCGCGACCTGTCACGC
Product: phage protein U
Products: NA
Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Tail Protein U; Tail Fiber Protein; Phage-Related Protein; Phage Protein U; Phage Tail Assembly Protein; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein; Tail Fiber Protein Of Prophage; Fels-2 Prophage Protein; Bacteriophage P2 Tail Protein GPU; Tail Protein; Tail Protein U
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGVLGSPISMDLISEMANTGDAY VLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTITRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKP KAKKG
Sequences:
>Translated_165_residues MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGVLGSPISMDLISEMANTGDAY VLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTITRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKP KAKKG >Mature_165_residues MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGVLGSPISMDLISEMANTGDAY VLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTITRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKP KAKKG
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17567; Mature: 17567
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGV CEECCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEECCEEEECC LGSPISMDLISEMANTGDAYVLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTI CCCCCCHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCCEEEEEECCCEEEEEEEE TRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKPKAKKG EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGV CEECCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEECCEEEECC LGSPISMDLISEMANTGDAYVLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTI CCCCCCHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCCEEEEEECCCEEEEEEEE TRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKPKAKKG EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA