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The map label for this gene is solR [H]

Identifier: 238027315

GI number: 238027315

Start: 1889718

End: 1890422

Strand: Reverse

Name: solR [H]

Synonym: bglu_1g17030

Alternate gene names: 238027315

Gene position: 1890422-1889718 (Counterclockwise)

Preceding gene: 238027316

Following gene: 238027312

Centisome position: 48.39

GC content: 61.84

Gene sequence:

>705_bases
ATGCAAGATTTTCTCCAGATTTGGCTATACGAATTTTCCCGTATCGAAAAACCGCAGCATCTCGGCGCCACATTGAGCCG
GGTTGCGGCGATACTCGGTTACGAATTCGTGGCTTATGGAATACGACGTCCGCTGCCACTCAGCAATCCTCCTTCGCTGA
CGGTATCGAACTACCCTGCCCGCTGGCAGGAACGCTATCAGGGGCTGAGGCTCGCCGAGATCGATCCGGTCGCGCGCGCA
GCGAATGCGAGCGATCGGCCGGTGGTGTGGTCATCGCAGGGCAACGACTCGGATCAGGCGTTCTGGCAGGAGGCGTCGTC
GTTCGGCCTCATGCACGGCTGGTCCTCCGCCACGCGCGGCGCGGAAGGTACGCTGGGCGTCCTGTCGCTGGCACGCGGCG
GCGACGCCATCGATGAGGTCGAGCGCGATCGAAACGAATTCATCGTGCACTGGCTCGCCAATGTCGCGCACGCCGCGCTG
GCGCCATTCCTGCCCGCGGCCGGCGAGCCCGAGGCCAATCTCACGTCGCGCGAAACCGATGTGCTGAAGTGGACCGCCGA
CGGCAAGACTGCCTATGAAATCTCGCGAATTCTCAGCATTTCGGAGAGCACCGTGAACTTCCACGTGAAGAACATCATGT
CGAAGCTGGGTACTTCCAACAAGATCCAGGCCGTGGCGAAGGCGGCGCTGACGGGCATGCTCTGA

Upstream 100 bases:

>100_bases
CGGCTCATTAATCGGCAAGCTCGATTAATGAGCATTTCAATAACCATTCCTGCGCTCTGGAATTTCCGGGCGAGGACATT
GAAGGAACTTCTGCATATCA

Downstream 100 bases:

>100_bases
GGCAGGCAGGGCGCGGCGGCGCCCTGCCTCGCCGCTGCGGGCGCCGCGGTTCAGGCAGGCGCGGCCTCGCGCGCATCGAG
GAACGCGCCGATGTGCGCGA

Product: LuxR family autoinducer-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MQDFLQIWLYEFSRIEKPQHLGATLSRVAAILGYEFVAYGIRRPLPLSNPPSLTVSNYPARWQERYQGLRLAEIDPVARA
ANASDRPVVWSSQGNDSDQAFWQEASSFGLMHGWSSATRGAEGTLGVLSLARGGDAIDEVERDRNEFIVHWLANVAHAAL
APFLPAAGEPEANLTSRETDVLKWTADGKTAYEISRILSISESTVNFHVKNIMSKLGTSNKIQAVAKAALTGML

Sequences:

>Translated_234_residues
MQDFLQIWLYEFSRIEKPQHLGATLSRVAAILGYEFVAYGIRRPLPLSNPPSLTVSNYPARWQERYQGLRLAEIDPVARA
ANASDRPVVWSSQGNDSDQAFWQEASSFGLMHGWSSATRGAEGTLGVLSLARGGDAIDEVERDRNEFIVHWLANVAHAAL
APFLPAAGEPEANLTSRETDVLKWTADGKTAYEISRILSISESTVNFHVKNIMSKLGTSNKIQAVAKAALTGML
>Mature_234_residues
MQDFLQIWLYEFSRIEKPQHLGATLSRVAAILGYEFVAYGIRRPLPLSNPPSLTVSNYPARWQERYQGLRLAEIDPVARA
ANASDRPVVWSSQGNDSDQAFWQEASSFGLMHGWSSATRGAEGTLGVLSLARGGDAIDEVERDRNEFIVHWLANVAHAAL
APFLPAAGEPEANLTSRETDVLKWTADGKTAYEISRILSISESTVNFHVKNIMSKLGTSNKIQAVAKAALTGML

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=227, Percent_Identity=32.5991189427313, Blast_Score=128, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 25713; Mature: 25713

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDFLQIWLYEFSRIEKPQHLGATLSRVAAILGYEFVAYGIRRPLPLSNPPSLTVSNYPA
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCH
RWQERYQGLRLAEIDPVARAANASDRPVVWSSQGNDSDQAFWQEASSFGLMHGWSSATRG
HHHHHHCCCCEECCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCHHCCC
AEGTLGVLSLARGGDAIDEVERDRNEFIVHWLANVAHAALAPFLPAAGEPEANLTSRETD
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VLKWTADGKTAYEISRILSISESTVNFHVKNIMSKLGTSNKIQAVAKAALTGML
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDFLQIWLYEFSRIEKPQHLGATLSRVAAILGYEFVAYGIRRPLPLSNPPSLTVSNYPA
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCH
RWQERYQGLRLAEIDPVARAANASDRPVVWSSQGNDSDQAFWQEASSFGLMHGWSSATRG
HHHHHHCCCCEECCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCHHCCC
AEGTLGVLSLARGGDAIDEVERDRNEFIVHWLANVAHAALAPFLPAAGEPEANLTSRETD
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VLKWTADGKTAYEISRILSISESTVNFHVKNIMSKLGTSNKIQAVAKAALTGML
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371457 [H]