Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027297

Identifier: 238027297

GI number: 238027297

Start: 1853453

End: 1854700

Strand: Reverse

Name: 238027297

Synonym: bglu_1g16840

Alternate gene names: NA

Gene position: 1854700-1853453 (Counterclockwise)

Preceding gene: 238027298

Following gene: 238027296

Centisome position: 47.48

GC content: 70.27

Gene sequence:

>1248_bases
ATGAAGAACACGAAGGTAGCGCTCGCCCTCGCCCTCTCGGCACTGGCCGGCGCCGCGAGCGCCGCGTCCGGCGCGCCGGA
CGCGCAGCGGGTGGTGAGGATCGACGGTTTCGGCGCGGAGTCGGGCGTGCTGCGCCCGTTCGGCGCCAACAGCGAGGCGG
CGCTGCGCGCGGCGGCCAAGGAGATCAACGAGGCGGGCGGCGTGAAGCTCGGTGACGGCGCGCGCGGCAGGATCGAAATC
AGCTATCACGACGACAGCTGCGCGCCCACCGAAGGCGTGGACGTGGTGCGCCGGCTGGCGCAGACCAATGCGCTGATCGC
GGTGGGCACCACCTGCTCGCCGGTGGTGCAGGCGGTGTTCGGTTCGCTGCAGAAGAAGGCGGGCGACACGGCCGACTCGG
GCCTGCGATTCCCGGTGTTTACCGACGTGGCGATGAAGATCGGGCTGGCCAAGACCTCCGACTGGTCGTTCCGCAACATC
CCCGACGAGAACGCGATGTACACCGATGTGTTCGCCTGGGTGCGCCGCGAGCATCCGGACGCGCGCACGCTCTACGGCGG
CGTCGAGCAGAACTTCGTGCATTCGAGCCAGACCTGGTACCAGGTGATGAAGCCGCGCGCGCAGGCGGCCGGCTTCGAGG
TGCTCGGCGAGACGCGCTGGCTGCTCGACGACACCAACTTCGCCGATCAGGTGCGCGACATCAAGCAGAAGAACGCCGAC
GTGGTGGTGATCTCGGCGCACCCGTACTCGGCCTGCGGCGTGCTGAAGGAGCTGCAGCGCCAGAACGTCCACCCGAAGGT
GCTGGTGGGCCTGACCAGCAGTTCGACGCCCGAGCTGATGAAGATCTGCGGCCCGGCGGCCGAGGGGCTGGTGATCCCGA
CCAGCTTCGCGCCGATCAACGCCCGCGCCGAGCGCGCCGCGAAGGAGACGGCCGCCTATGGCGGCTACGCGGACCTGCAC
AGCATGGCGGCCTACGAGATCCTCTACATGATCAAGACGGCGATCGAGACGCAGGGCGTGCTGGCCAAACCCGACAGCGT
GCAGGCCGATCGCGACAAGCTGCGCGAGGGCCTGGCCGCCATCCGCACGGCCGACGGCCTGCTCGGCCCGGTGGGCCGCA
CCGCCGAGCGCGAGTCGGTCAAGCCGTTCGTGCTGGTGCAGGCGCACGACAGCGTCTGGCAGGTGATCGAGCGGCCCGCC
GCGCCCAACGCAGTGGCCAGCAACGGCCCGGCCGCGCGCCAGCCGTGA

Upstream 100 bases:

>100_bases
GGCGGCCAGCTAGTGAAATCGTGAGCATCTCAACGACGGTCCCGCACCGTGCCGGCATCGTGCCGCGCGCGCCGGGGCCG
CTCCCTGGAGGAATGCCACG

Downstream 100 bases:

>100_bases
CGCGGCCGCTGGTGGAACTGCGCGGCGTGGGCCGCCGCTACGGCGCGCTCCACGCGCTCGCGGGGCTCGACCTGACGATC
CGCGCCGGCGAGACGCTCGG

Product: Extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAKEINEAGGVKLGDGARGRIEI
SYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVFGSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNI
PDENAMYTDVFAWVRREHPDARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD
VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPINARAERAAKETAAYGGYADLH
SMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAAIRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPA
APNAVASNGPAARQP

Sequences:

>Translated_415_residues
MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAKEINEAGGVKLGDGARGRIEI
SYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVFGSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNI
PDENAMYTDVFAWVRREHPDARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD
VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPINARAERAAKETAAYGGYADLH
SMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAAIRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPA
APNAVASNGPAARQP
>Mature_415_residues
MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAKEINEAGGVKLGDGARGRIEI
SYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVFGSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNI
PDENAMYTDVFAWVRREHPDARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD
VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPINARAERAAKETAAYGGYADLH
SMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAAIRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPA
APNAVASNGPAARQP

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44163; Mature: 44163

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAK
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
EINEAGGVKLGDGARGRIEISYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVF
HHHHHCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
GSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNIPDENAMYTDVFAWVRREHPD
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
ARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD
HHHHHCCHHHHHHCCHHHHHHHHCCHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHCCCC
VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPIN
EEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEEECCCCCCC
ARAERAAKETAAYGGYADLHSMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH
IRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPAAPNAVASNGPAARQP
HHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAK
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
EINEAGGVKLGDGARGRIEISYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVF
HHHHHCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
GSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNIPDENAMYTDVFAWVRREHPD
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
ARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD
HHHHHCCHHHHHHCCHHHHHHHHCCHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHCCCC
VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPIN
EEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEEECCCCCCC
ARAERAAKETAAYGGYADLHSMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH
IRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPAAPNAVASNGPAARQP
HHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA