| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027297
Identifier: 238027297
GI number: 238027297
Start: 1853453
End: 1854700
Strand: Reverse
Name: 238027297
Synonym: bglu_1g16840
Alternate gene names: NA
Gene position: 1854700-1853453 (Counterclockwise)
Preceding gene: 238027298
Following gene: 238027296
Centisome position: 47.48
GC content: 70.27
Gene sequence:
>1248_bases ATGAAGAACACGAAGGTAGCGCTCGCCCTCGCCCTCTCGGCACTGGCCGGCGCCGCGAGCGCCGCGTCCGGCGCGCCGGA CGCGCAGCGGGTGGTGAGGATCGACGGTTTCGGCGCGGAGTCGGGCGTGCTGCGCCCGTTCGGCGCCAACAGCGAGGCGG CGCTGCGCGCGGCGGCCAAGGAGATCAACGAGGCGGGCGGCGTGAAGCTCGGTGACGGCGCGCGCGGCAGGATCGAAATC AGCTATCACGACGACAGCTGCGCGCCCACCGAAGGCGTGGACGTGGTGCGCCGGCTGGCGCAGACCAATGCGCTGATCGC GGTGGGCACCACCTGCTCGCCGGTGGTGCAGGCGGTGTTCGGTTCGCTGCAGAAGAAGGCGGGCGACACGGCCGACTCGG GCCTGCGATTCCCGGTGTTTACCGACGTGGCGATGAAGATCGGGCTGGCCAAGACCTCCGACTGGTCGTTCCGCAACATC CCCGACGAGAACGCGATGTACACCGATGTGTTCGCCTGGGTGCGCCGCGAGCATCCGGACGCGCGCACGCTCTACGGCGG CGTCGAGCAGAACTTCGTGCATTCGAGCCAGACCTGGTACCAGGTGATGAAGCCGCGCGCGCAGGCGGCCGGCTTCGAGG TGCTCGGCGAGACGCGCTGGCTGCTCGACGACACCAACTTCGCCGATCAGGTGCGCGACATCAAGCAGAAGAACGCCGAC GTGGTGGTGATCTCGGCGCACCCGTACTCGGCCTGCGGCGTGCTGAAGGAGCTGCAGCGCCAGAACGTCCACCCGAAGGT GCTGGTGGGCCTGACCAGCAGTTCGACGCCCGAGCTGATGAAGATCTGCGGCCCGGCGGCCGAGGGGCTGGTGATCCCGA CCAGCTTCGCGCCGATCAACGCCCGCGCCGAGCGCGCCGCGAAGGAGACGGCCGCCTATGGCGGCTACGCGGACCTGCAC AGCATGGCGGCCTACGAGATCCTCTACATGATCAAGACGGCGATCGAGACGCAGGGCGTGCTGGCCAAACCCGACAGCGT GCAGGCCGATCGCGACAAGCTGCGCGAGGGCCTGGCCGCCATCCGCACGGCCGACGGCCTGCTCGGCCCGGTGGGCCGCA CCGCCGAGCGCGAGTCGGTCAAGCCGTTCGTGCTGGTGCAGGCGCACGACAGCGTCTGGCAGGTGATCGAGCGGCCCGCC GCGCCCAACGCAGTGGCCAGCAACGGCCCGGCCGCGCGCCAGCCGTGA
Upstream 100 bases:
>100_bases GGCGGCCAGCTAGTGAAATCGTGAGCATCTCAACGACGGTCCCGCACCGTGCCGGCATCGTGCCGCGCGCGCCGGGGCCG CTCCCTGGAGGAATGCCACG
Downstream 100 bases:
>100_bases CGCGGCCGCTGGTGGAACTGCGCGGCGTGGGCCGCCGCTACGGCGCGCTCCACGCGCTCGCGGGGCTCGACCTGACGATC CGCGCCGGCGAGACGCTCGG
Product: Extracellular ligand-binding receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAKEINEAGGVKLGDGARGRIEI SYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVFGSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNI PDENAMYTDVFAWVRREHPDARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPINARAERAAKETAAYGGYADLH SMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAAIRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPA APNAVASNGPAARQP
Sequences:
>Translated_415_residues MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAKEINEAGGVKLGDGARGRIEI SYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVFGSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNI PDENAMYTDVFAWVRREHPDARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPINARAERAAKETAAYGGYADLH SMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAAIRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPA APNAVASNGPAARQP >Mature_415_residues MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAKEINEAGGVKLGDGARGRIEI SYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVFGSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNI PDENAMYTDVFAWVRREHPDARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPINARAERAAKETAAYGGYADLH SMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAAIRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPA APNAVASNGPAARQP
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44163; Mature: 44163
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAK CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH EINEAGGVKLGDGARGRIEISYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVF HHHHHCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHH GSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNIPDENAMYTDVFAWVRREHPD HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD HHHHHCCHHHHHHCCHHHHHHHHCCHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHCCCC VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPIN EEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEEECCCCCCC ARAERAAKETAAYGGYADLHSMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH IRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPAAPNAVASNGPAARQP HHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNTKVALALALSALAGAASAASGAPDAQRVVRIDGFGAESGVLRPFGANSEAALRAAAK CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH EINEAGGVKLGDGARGRIEISYHDDSCAPTEGVDVVRRLAQTNALIAVGTTCSPVVQAVF HHHHHCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHH GSLQKKAGDTADSGLRFPVFTDVAMKIGLAKTSDWSFRNIPDENAMYTDVFAWVRREHPD HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ARTLYGGVEQNFVHSSQTWYQVMKPRAQAAGFEVLGETRWLLDDTNFADQVRDIKQKNAD HHHHHCCHHHHHHCCHHHHHHHHCCHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHCCCC VVVISAHPYSACGVLKELQRQNVHPKVLVGLTSSSTPELMKICGPAAEGLVIPTSFAPIN EEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEEECCCCCCC ARAERAAKETAAYGGYADLHSMAAYEILYMIKTAIETQGVLAKPDSVQADRDKLREGLAA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH IRTADGLLGPVGRTAERESVKPFVLVQAHDSVWQVIERPAAPNAVASNGPAARQP HHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA