BacMap

Definition	Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession	NC_012724
Length	3,906,507

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The map label for this gene is fabG [H]

Identifier: 238027268

GI number: 238027268

Start: 1817636

End: 1818385

Strand: Reverse

Name: fabG [H]

Synonym: bglu_1g16550

Alternate gene names: 238027268

Gene position: 1818385-1817636 (Counterclockwise)

Preceding gene: 238027269

Following gene: 238027267

Centisome position: 46.55

GC content: 69.87

Gene sequence:

>750_bases
ATGAACGACAAGGTTGCCCTCGTCACCGGGGCGAGTTCGGGGATCGGCCGCAGCGTCGCGCTGGGCCTGCTGCAGGCCGG
CTACCACGTGGTGCTGGCGGCGCGCAAGGTCGAGGCGCTGCGGCAGGCGGCCGAGGAATCGGGCGCACCCGAGCGCGCGC
TGGCCGTGGGCTGCGACGTCGGCGACCCCGCCGCCGTGCAGGACCTGTTCGAGCGCATCGACGCGCACTGGGGCCGCCTG
GACCTGCTGTTCAACAACGCAGGCGTGTTCACGCCGCAGTGCTCGCTGGAGGAGATGCCCGTCGAGCACTGGAAGCAGGC
GGTGGACGTCAACCTCACGGGGGCGTTCCTCTGCACGCAGGGCGCGTTCCGCCTGATGAAGAAACAGCAGCCGGGCGGCG
GGCGGATCATCAACAACGGCTCGATCTCGGCGCACGCGCCGCGCCCGCAGGCAGCCGCGTACACGGCCACCAAGCACGCC
ATCACCGGGCTCACCAAGGCGGCCTCGCTCGACGGACGCCGGTACAACATCGCCTGCGGGCAGATCGACATCGGCAACGT
GGTCAGCGACATGAGCAGCCAGATGGCGCACGGCACGCTGCAGGCGGACGGCTCGCTGAAGGTCGAGCCGCGCATGAGCA
TGGACAACGTGGTGCGCGCGGTGCTCTACATGGACAGCCTGCCGCTCGACGCGAACGTGCTGTTCATGACGGTGATGGCG
AGCCACATGCCGTTCGTGGGGCGCGGCTGA

Upstream 100 bases:

>100_bases
ATCGGCGCGACGCGCTGAACCAACCGGCCCGGCCGCGCGGCATCGGCTCGCGAGGCGAGCCCGCGCCGGTGCGAGCGGGC
GCTCAATCAGGGAGAAACAG

Downstream 100 bases:

>100_bases
TCGCGCCGGGCGCCAGCCGGGCCGGATGACGGGGCGGTGGTGCCGGCGCGCGGCCGGCCTCGCCCGCATGGGCGGCCCGG
CCCGCGATGCCGCCGGGGCG

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNDKVALVTGASSGIGRSVALGLLQAGYHVVLAARKVEALRQAAEESGAPERALAVGCDVGDPAAVQDLFERIDAHWGRL
DLLFNNAGVFTPQCSLEEMPVEHWKQAVDVNLTGAFLCTQGAFRLMKKQQPGGGRIINNGSISAHAPRPQAAAYTATKHA
ITGLTKAASLDGRRYNIACGQIDIGNVVSDMSSQMAHGTLQADGSLKVEPRMSMDNVVRAVLYMDSLPLDANVLFMTVMA
SHMPFVGRG

Sequences:

>Translated_249_residues
MNDKVALVTGASSGIGRSVALGLLQAGYHVVLAARKVEALRQAAEESGAPERALAVGCDVGDPAAVQDLFERIDAHWGRL
DLLFNNAGVFTPQCSLEEMPVEHWKQAVDVNLTGAFLCTQGAFRLMKKQQPGGGRIINNGSISAHAPRPQAAAYTATKHA
ITGLTKAASLDGRRYNIACGQIDIGNVVSDMSSQMAHGTLQADGSLKVEPRMSMDNVVRAVLYMDSLPLDANVLFMTVMA
SHMPFVGRG
>Mature_249_residues
MNDKVALVTGASSGIGRSVALGLLQAGYHVVLAARKVEALRQAAEESGAPERALAVGCDVGDPAAVQDLFERIDAHWGRL
DLLFNNAGVFTPQCSLEEMPVEHWKQAVDVNLTGAFLCTQGAFRLMKKQQPGGGRIINNGSISAHAPRPQAAAYTATKHA
ITGLTKAASLDGRRYNIACGQIDIGNVVSDMSSQMAHGTLQADGSLKVEPRMSMDNVVRAVLYMDSLPLDANVLFMTVMA
SHMPFVGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI31542939, Length=189, Percent_Identity=37.5661375661376, Blast_Score=114, Evalue=8e-26,
Organism=Homo sapiens, GI224922801, Length=173, Percent_Identity=38.150289017341, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=32.5, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI40254992, Length=201, Percent_Identity=32.8358208955224, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI209862901, Length=217, Percent_Identity=32.7188940092166, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI19923983, Length=217, Percent_Identity=32.7188940092166, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI32483357, Length=182, Percent_Identity=32.967032967033, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI126723191, Length=192, Percent_Identity=31.7708333333333, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI59889578, Length=144, Percent_Identity=32.6388888888889, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI19923817, Length=195, Percent_Identity=29.2307692307692, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI4504505, Length=198, Percent_Identity=32.8282828282828, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI7706318, Length=170, Percent_Identity=28.2352941176471, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI4503817, Length=177, Percent_Identity=27.683615819209, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI15277342, Length=207, Percent_Identity=29.951690821256, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI5031737, Length=199, Percent_Identity=28.1407035175879, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=27.979274611399, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI40548397, Length=194, Percent_Identity=26.8041237113402, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI214010158, Length=194, Percent_Identity=26.8041237113402, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI214010156, Length=194, Percent_Identity=26.8041237113402, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI22758144, Length=194, Percent_Identity=26.8041237113402, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1788459, Length=191, Percent_Identity=38.2198952879581, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787335, Length=193, Percent_Identity=31.6062176165803, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI2367175, Length=174, Percent_Identity=36.7816091954023, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789208, Length=192, Percent_Identity=29.1666666666667, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI87082160, Length=197, Percent_Identity=30.4568527918782, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787526, Length=184, Percent_Identity=30.9782608695652, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082100, Length=201, Percent_Identity=31.8407960199005, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787820, Length=247, Percent_Identity=24.6963562753036, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786812, Length=188, Percent_Identity=31.9148936170213, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1790717, Length=204, Percent_Identity=27.9411764705882, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789057, Length=241, Percent_Identity=27.8008298755187, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789378, Length=186, Percent_Identity=30.6451612903226, Blast_Score=71, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=201, Percent_Identity=32.3383084577114, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=206, Percent_Identity=30.5825242718447, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17562906, Length=200, Percent_Identity=30.5, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=197, Percent_Identity=28.9340101522843, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=201, Percent_Identity=30.8457711442786, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71997402, Length=192, Percent_Identity=30.2083333333333, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=191, Percent_Identity=28.7958115183246, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=203, Percent_Identity=29.5566502463054, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=231, Percent_Identity=27.7056277056277, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=192, Percent_Identity=28.6458333333333, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=202, Percent_Identity=28.2178217821782, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=180, Percent_Identity=30, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=204, Percent_Identity=25.9803921568627, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17560150, Length=195, Percent_Identity=27.1794871794872, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538182, Length=194, Percent_Identity=30.9278350515464, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=175, Percent_Identity=30.2857142857143, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17568967, Length=190, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=192, Percent_Identity=25.5208333333333, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=228, Percent_Identity=31.5789473684211, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=184, Percent_Identity=28.804347826087, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=175, Percent_Identity=30.2857142857143, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=193, Percent_Identity=27.979274611399, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=168, Percent_Identity=27.9761904761905, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322861, Length=235, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322067, Length=196, Percent_Identity=30.1020408163265, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007236, Length=252, Percent_Identity=32.1428571428571, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI116007238, Length=179, Percent_Identity=35.195530726257, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24641232, Length=174, Percent_Identity=35.632183908046, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI116007234, Length=253, Percent_Identity=30.8300395256917, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI18859837, Length=209, Percent_Identity=34.9282296650718, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI116007232, Length=184, Percent_Identity=35.3260869565217, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24648944, Length=232, Percent_Identity=31.0344827586207, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24580925, Length=185, Percent_Identity=30.2702702702703, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571387, Length=248, Percent_Identity=30.241935483871, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24639444, Length=175, Percent_Identity=34.2857142857143, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI281364494, Length=246, Percent_Identity=28.8617886178862, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21357041, Length=195, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI21355319, Length=169, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641388, Length=171, Percent_Identity=32.7485380116959, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24644339, Length=171, Percent_Identity=30.4093567251462, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571526, Length=193, Percent_Identity=30.0518134715026, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI23397609, Length=191, Percent_Identity=29.3193717277487, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21358495, Length=185, Percent_Identity=29.1891891891892, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24648693, Length=170, Percent_Identity=31.1764705882353, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21355889, Length=170, Percent_Identity=31.1764705882353, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24663911, Length=248, Percent_Identity=27.4193548387097, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161076933, Length=190, Percent_Identity=28.4210526315789, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584748, Length=190, Percent_Identity=28.4210526315789, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584752, Length=190, Percent_Identity=29.4736842105263, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17737361, Length=174, Percent_Identity=29.3103448275862, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643142, Length=188, Percent_Identity=31.3829787234043, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355631, Length=166, Percent_Identity=28.3132530120482, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26430; Mature: 26430

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKVALVTGASSGIGRSVALGLLQAGYHVVLAARKVEALRQAAEESGAPERALAVGCDV
CCCCEEEEECCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHCCCCCCEEEEECCC
GDPAAVQDLFERIDAHWGRLDLLFNNAGVFTPQCSLEEMPVEHWKQAVDVNLTGAFLCTQ
CCHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCHHCCCHHHHHHHHCCCCCHHHHHHH
GAFRLMKKQQPGGGRIINNGSISAHAPRPQAAAYTATKHAITGLTKAASLDGRRYNIACG
HHHHHHHHCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
QIDIGNVVSDMSSQMAHGTLQADGSLKVEPRMSMDNVVRAVLYMDSLPLDANVLFMTVMA
CEEHHHHHHHHHHHHHCCEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
SHMPFVGRG
HHCCCCCCC
>Mature Secondary Structure
MNDKVALVTGASSGIGRSVALGLLQAGYHVVLAARKVEALRQAAEESGAPERALAVGCDV
CCCCEEEEECCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHCCCCCCEEEEECCC
GDPAAVQDLFERIDAHWGRLDLLFNNAGVFTPQCSLEEMPVEHWKQAVDVNLTGAFLCTQ
CCHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCHHCCCHHHHHHHHCCCCCHHHHHHH
GAFRLMKKQQPGGGRIINNGSISAHAPRPQAAAYTATKHAITGLTKAASLDGRRYNIACG
HHHHHHHHCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
QIDIGNVVSDMSSQMAHGTLQADGSLKVEPRMSMDNVVRAVLYMDSLPLDANVLFMTVMA
CEEHHHHHHHHHHHHHCCEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
SHMPFVGRG
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]