Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027254

Identifier: 238027254

GI number: 238027254

Start: 1800235

End: 1800522

Strand: Reverse

Name: 238027254

Synonym: bglu_1g16410

Alternate gene names: NA

Gene position: 1800522-1800235 (Counterclockwise)

Preceding gene: 238027256

Following gene: 238027252

Centisome position: 46.09

GC content: 71.53

Gene sequence:

>288_bases
ATGTTCTATCTGCTGACCTACGATCTGGTCGACAACTATCTCGAACGCCGCGGCGCATATCGCGAGGAACATCTCGCGCT
CGCCCAGGCCGCGACCGAGCGTGGCGAGCTGCTGCTCGGCGGCGCGCTGGCCGATCCGGCCGACTGCGCGGTGCTGCTGT
TCACGGGCGACACGCCGGCCGCCGCCGAGGCGTTCGCGGCGGCCGACCCCTATGTGCGCAACGGCCTCGTGCGGCAGTGG
CAGGTGCGGCGCTGGAACGTGGCCGCCGGCCGCTACGCGCAGCGCTGA

Upstream 100 bases:

>100_bases
AAGCATTTGTTCGCCGGCGCGGGCGCGGCGCCTATACTGGACGTGCCCGGCCGCCGGCCGGCCCGCGGCCCCGCTCCGCG
ATCCCGCCACAGGAGGCCCG

Downstream 100 bases:

>100_bases
CCGCGCCAGGGCCGGCGGCCCCGCTCACAGCCAGCCGGCGCGCCGGAAGCGCCACCAGAGCGCGAGGTCGGCCACCGCCA
TCACGCCGAGGCAGGCGTAG

Product: YciI-like protein

Products: NA

Alternate protein names: YCII-Related Protein; Ycii-Related Protein; YCII-Related Domain Superfamily Protein; YCII-Related

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MFYLLTYDLVDNYLERRGAYREEHLALAQAATERGELLLGGALADPADCAVLLFTGDTPAAAEAFAAADPYVRNGLVRQW
QVRRWNVAAGRYAQR

Sequences:

>Translated_95_residues
MFYLLTYDLVDNYLERRGAYREEHLALAQAATERGELLLGGALADPADCAVLLFTGDTPAAAEAFAAADPYVRNGLVRQW
QVRRWNVAAGRYAQR
>Mature_95_residues
MFYLLTYDLVDNYLERRGAYREEHLALAQAATERGELLLGGALADPADCAVLLFTGDTPAAAEAFAAADPYVRNGLVRQW
QVRRWNVAAGRYAQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10576; Mature: 10576

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYLLTYDLVDNYLERRGAYREEHLALAQAATERGELLLGGALADPADCAVLLFTGDTPA
CEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCCCC
AAEAFAAADPYVRNGLVRQWQVRRWNVAAGRYAQR
HHHHHHCCCCHHHCCCHHHHCCEEECCCCCCCCCC
>Mature Secondary Structure
MFYLLTYDLVDNYLERRGAYREEHLALAQAATERGELLLGGALADPADCAVLLFTGDTPA
CEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCCCC
AAEAFAAADPYVRNGLVRQWQVRRWNVAAGRYAQR
HHHHHHCCCCHHHCCCHHHHCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA