| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027252
Identifier: 238027252
GI number: 238027252
Start: 1798389
End: 1799003
Strand: Reverse
Name: 238027252
Synonym: bglu_1g16390
Alternate gene names: NA
Gene position: 1799003-1798389 (Counterclockwise)
Preceding gene: 238027254
Following gene: 238027249
Centisome position: 46.05
GC content: 68.62
Gene sequence:
>615_bases GTGAAATACCTGGTGTTTTTCTGCGGTCATGCCGGCACCGGCAAGACCACGCTCGCCAAGCAACTGATCGGCCCGCTGAT GCGGACCACCGGCGAGGCATTCTGCCTGCTCGACAAGGACACGTTGTACGGCCGCTACAGCTCGGCCGCGATGGGCGCGC TGACGCAGGACCCGAACGATCGCGACAGCCCGCTCTACCTGCAGCATCTGCGCGACCCGGAATACCAGGGTCTGCTCGAC ACCGCGCGCGAGAACCTCGAACTAGGCATCAGCGTGCTGGTGGTGGCGCCGCTGTCGCGCGAGATCCGCGACGGACGGCT GCTGAACCGGCAATGGCTCGGCATCGGCCACGACATCGAGCTGCGCGTGGTGTGGGTGGAAACCTCGGAGGAAACCGCGC GCGCGCGCATCATCGCGCGCGGCAATCCGAACGACGCCTACAAGCTCGCGCATTGGGACGCGTACCGGCAGCGCCGCTTC GTGCCGGAGGGCGCCGCCTGCGAAGGGCTGCTGAGGTTCGACAACACCGCCCCGACCGGCGCCGATATCGAGGCGCTGCT GCATCGGATCGTGCCGCCCGCCGGCGGCGCGATGGTGCCGCCGCTGCCGGCCTAG
Upstream 100 bases:
>100_bases CGCATGCATGGCGGCACCGCCGGTGCCGCGCGCACGACGCTCATGGCGTTCGCGCCGTTCCCGTCCGGCTTGCCGCCGCC ACCTCCGGAGGCCCGCGCTC
Downstream 100 bases:
>100_bases GCGCGGCTTCCGGATACGCTTGCCGGGGCGGCCCGCCGCGCCCGCCGATCAGCCGCCCCGATCCCCGCGCGCGTGCGGGG CAGGCGCGCCGGCTCGCAGT
Product: putative ATPase
Products: NA
Alternate protein names: P-Loop ATPase Protein; ATP-Ase; Transcriptional Regulator; Shikimate Kinase
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MKYLVFFCGHAGTGKTTLAKQLIGPLMRTTGEAFCLLDKDTLYGRYSSAAMGALTQDPNDRDSPLYLQHLRDPEYQGLLD TARENLELGISVLVVAPLSREIRDGRLLNRQWLGIGHDIELRVVWVETSEETARARIIARGNPNDAYKLAHWDAYRQRRF VPEGAACEGLLRFDNTAPTGADIEALLHRIVPPAGGAMVPPLPA
Sequences:
>Translated_204_residues MKYLVFFCGHAGTGKTTLAKQLIGPLMRTTGEAFCLLDKDTLYGRYSSAAMGALTQDPNDRDSPLYLQHLRDPEYQGLLD TARENLELGISVLVVAPLSREIRDGRLLNRQWLGIGHDIELRVVWVETSEETARARIIARGNPNDAYKLAHWDAYRQRRF VPEGAACEGLLRFDNTAPTGADIEALLHRIVPPAGGAMVPPLPA >Mature_204_residues MKYLVFFCGHAGTGKTTLAKQLIGPLMRTTGEAFCLLDKDTLYGRYSSAAMGALTQDPNDRDSPLYLQHLRDPEYQGLLD TARENLELGISVLVVAPLSREIRDGRLLNRQWLGIGHDIELRVVWVETSEETARARIIARGNPNDAYKLAHWDAYRQRRF VPEGAACEGLLRFDNTAPTGADIEALLHRIVPPAGGAMVPPLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22580; Mature: 22580
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLVFFCGHAGTGKTTLAKQLIGPLMRTTGEAFCLLDKDTLYGRYSSAAMGALTQDPND CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCC RDSPLYLQHLRDPEYQGLLDTARENLELGISVLVVAPLSREIRDGRLLNRQWLGIGHDIE CCCCCCEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCHHHHCCEEECHHHCCCCCCEE LRVVWVETSEETARARIIARGNPNDAYKLAHWDAYRQRRFVPEGAACEGLLRFDNTAPTG EEEEEEECCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCHHHEEEECCCCCCC ADIEALLHRIVPPAGGAMVPPLPA CCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKYLVFFCGHAGTGKTTLAKQLIGPLMRTTGEAFCLLDKDTLYGRYSSAAMGALTQDPND CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCC RDSPLYLQHLRDPEYQGLLDTARENLELGISVLVVAPLSREIRDGRLLNRQWLGIGHDIE CCCCCCEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCHHHHCCEEECHHHCCCCCCEE LRVVWVETSEETARARIIARGNPNDAYKLAHWDAYRQRRFVPEGAACEGLLRFDNTAPTG EEEEEEECCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCHHHEEEECCCCCCC ADIEALLHRIVPPAGGAMVPPLPA CCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA