| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027208
Identifier: 238027208
GI number: 238027208
Start: 1743950
End: 1744567
Strand: Direct
Name: 238027208
Synonym: bglu_1g15940
Alternate gene names: NA
Gene position: 1743950-1744567 (Clockwise)
Preceding gene: 238027207
Following gene: 238027209
Centisome position: 44.64
GC content: 75.57
Gene sequence:
>618_bases GTGGCAGCCAGCCGAACCCGAATCCGCATCCGAGTCGCGACGGCGCTCGCGTTGGCCCTCGCCGCCGGCACGCTGCAGGC GAAGCAGAATGCGCCTGCGGCGAAGCCGCCCGCGCAGCCGCCCGCGGCCGCCACCTCCGGCGCCTCCACCACCGAAGCGG CCGCCGCGGCGGCCGCGGCACCGCCGGAGCGCGACGACACCGCGCCGGCCACGCCGCTGAAGCCGGATCCGGCGCTCGAG AAGCTGCCGCGCTACACGGGCACGCTCGGCGGCCGGGCGATCGTCGCGCATCTCGGGCCGAAGGCGGGCGAGTCGGGCCT GCACGGCGAATACCGCTACAGCGACACGGGCCAGGTGATCCTGCTGGCCGGCGATCGTGACGGCGACACGCTCGAACTCG AGGAATCGAACGACGGCACCAACATCACGGGCCTTTGGACCGGCCGCCTCGATGCCTCGGGCGCGCTGTCGGCGGACCGC ACCAATGCCGACGAGTCGGACCCGCAGCCGGTCGTGCTGCACCTGGCCACGGCGCCGGCACCGGCGCCGCGTTCGGGCAC CACGGCGCCCGCCGGGCACGCGGTCGGCGGCGTCGGCAACCTCGGCACCACGGATTGA
Upstream 100 bases:
>100_bases CATCGGCGGCGGCCAGGGCATTGCCGCCGTGTTCGAACGTATCTGACGACATCCGGGCGGCCGCTTCGGGCCGCCCACGC AACCCAAGGAGTGACAAGAC
Downstream 100 bases:
>100_bases GTCAGGGCGCGGGCGGCCCTGGCGCCCGCGATCGCGGCACGGTTCGCGCCGCCCCGGCGGCCCACCGAGCCGGCGCGGCT GCGCTCGACTGTATCGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MAASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAAPPERDDTAPATPLKPDPALE KLPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVILLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADR TNADESDPQPVVLHLATAPAPAPRSGTTAPAGHAVGGVGNLGTTD
Sequences:
>Translated_205_residues MAASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAAPPERDDTAPATPLKPDPALE KLPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVILLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADR TNADESDPQPVVLHLATAPAPAPRSGTTAPAGHAVGGVGNLGTTD >Mature_204_residues AASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAAPPERDDTAPATPLKPDPALEK LPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVILLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADRT NADESDPQPVVLHLATAPAPAPRSGTTAPAGHAVGGVGNLGTTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20432; Mature: 20301
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAA CCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC PPERDDTAPATPLKPDPALEKLPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVI CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCEE LLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADRTNADESDPQPVVLHLATAPA EEECCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC PAPRSGTTAPAGHAVGGVGNLGTTD CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAA CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC PPERDDTAPATPLKPDPALEKLPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVI CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCEE LLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADRTNADESDPQPVVLHLATAPA EEECCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC PAPRSGTTAPAGHAVGGVGNLGTTD CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA