Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027197

Identifier: 238027197

GI number: 238027197

Start: 1733361

End: 1733744

Strand: Direct

Name: 238027197

Synonym: bglu_1g15830

Alternate gene names: NA

Gene position: 1733361-1733744 (Clockwise)

Preceding gene: 238027196

Following gene: 238027198

Centisome position: 44.37

GC content: 65.36

Gene sequence:

>384_bases
ATGGCTGATATGCCAACCAACGACGTCGTCGAGCGCCGCCTGCGAGCAGGAGACCAGAGGTTCAAGCAGATCCAGGCGCG
CATTGACGCGAGCGACGAGCAGGTGCGGGCGCACCTGTCCGCTCAGGACAGGAAGATAGACGCGATCGCGGCCGCTGTCT
GCAAGATCGAGACGAACACGCAGTCGATGGTCGACACGTGGGAGGGCGGCGCGCGCGTCGTGCGAACAATGTGCCGCCTG
GCCGAGGCGTGGCGCTTCGTGGTTCGGCATGTCGCGTTGCCGGTTGTGGGGGGCGGCGCGGCCGGCGTGATCCTTCTGCG
CTATGTGCAACACGAGCCCATTCCGGAATGGGCCCACGCGGTACTGAAGATGCTGATCGGATGA

Upstream 100 bases:

>100_bases
CTGGAACCGATGTGGTGCAGTTCCTGTGCGCGGGAAACTGATTACACGCTGTACCAGCAGCCAGCCGCCCGCGAGGCGGC
TTTTTCATTTCGGGGGATTG

Downstream 100 bases:

>100_bases
ACGCCATGACACCTCAAATCCTCTCGGCGGCGCTGCAGATCCCGCTTGCACGCGCGACGCCGTTCGCCGCACCGATCGCG
GATGCGATGGCGCGCTACGC

Product: putative phage transmembrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MADMPTNDVVERRLRAGDQRFKQIQARIDASDEQVRAHLSAQDRKIDAIAAAVCKIETNTQSMVDTWEGGARVVRTMCRL
AEAWRFVVRHVALPVVGGGAAGVILLRYVQHEPIPEWAHAVLKMLIG

Sequences:

>Translated_127_residues
MADMPTNDVVERRLRAGDQRFKQIQARIDASDEQVRAHLSAQDRKIDAIAAAVCKIETNTQSMVDTWEGGARVVRTMCRL
AEAWRFVVRHVALPVVGGGAAGVILLRYVQHEPIPEWAHAVLKMLIG
>Mature_126_residues
ADMPTNDVVERRLRAGDQRFKQIQARIDASDEQVRAHLSAQDRKIDAIAAAVCKIETNTQSMVDTWEGGARVVRTMCRLA
EAWRFVVRHVALPVVGGGAAGVILLRYVQHEPIPEWAHAVLKMLIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14127; Mature: 13995

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADMPTNDVVERRLRAGDQRFKQIQARIDASDEQVRAHLSAQDRKIDAIAAAVCKIETNT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QSMVDTWEGGARVVRTMCRLAEAWRFVVRHVALPVVGGGAAGVILLRYVQHEPIPEWAHA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH
VLKMLIG
HHHHHHC
>Mature Secondary Structure 
ADMPTNDVVERRLRAGDQRFKQIQARIDASDEQVRAHLSAQDRKIDAIAAAVCKIETNT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QSMVDTWEGGARVVRTMCRLAEAWRFVVRHVALPVVGGGAAGVILLRYVQHEPIPEWAHA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH
VLKMLIG
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA