| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027191
Identifier: 238027191
GI number: 238027191
Start: 1726938
End: 1727729
Strand: Direct
Name: 238027191
Synonym: bglu_1g15770
Alternate gene names: NA
Gene position: 1726938-1727729 (Clockwise)
Preceding gene: 238027190
Following gene: 238027192
Centisome position: 44.21
GC content: 66.92
Gene sequence:
>792_bases ATGAATCGAAACGAAAGAATCGATGATCCGCAAGCGTCATTGCGGGCAGCTTTCGGTGATCTTCGTGCGCAGGCCTGGAC CGCTCTTCCCGGGATCATCGAGTCGTATGACCCGGGCGCGCAGACCGTCGCCATCCAGGCCGGTCTGAAGGTGCCGGTCC GGGCCGGCGATGGCACTCTCACAACGGTGGAGCTGCCGCAACTGGTCGATTGCCCCGCGCAGTTCCCGTCTGGCGGAAAT TCTACTCTCACCTTCCCGGTGGCCCGCGGCGACGAGTGCCTGGTGGTGTTCGCCTCGCGCTGCATCGACGCCTGGTGGCA GTCGGGCGGGGTGCAGGAGCTTGCCGACACCCGGATGCACAGCCTGTCGGATGGCTTCGCGCTGCTGGGCTTCCGATCGC AGCCCCGCGTCCTGACCAACGTCAGCACCACCTCGGCGCAGCTGCGCAGCGACGACGGCGCGACATTCATCGACCTGAAC CCGACGGCCCAGACAGTGAAGATCGTGGCGCCCGGCGGTTTCGAGGTGGTGGCGCCGACGCAGGTGCTGACGGCGGCCAC CTCGCTGACCGTGAACTCGCCGCAATCCGGCTTCAGTGGCGCGGTGATCGTGCAGGGTCTGTTCTCATTCCTGGCCGGCA TGGTCGGCAGCACTGCCGAGGGCGTGGCCGCGACGATCACCGGCGCGATCAACTTCATCGGCTCGCTGACCTCGAACGGC AAGCGGATCGACGACGGGCATACGCATGGCGGCGTGCAGCCCGGAGACGGCAGCAGCGGCCCGGTCAACTGA
Upstream 100 bases:
>100_bases AATATAAACGCGACCGGGTCCTGGCGCGCGATGGCCGCCGAGGAGATGGCCGTAATGCACGTGAATAAAACCCGCAGAAT TTTTTTCATGTTCCCACTCT
Downstream 100 bases:
>100_bases CCGTCGCGTCATCCATCACCAGCCCGGCCGCGCGCCGGGCTTTTTCGTTTCTGAGGCCCCGATGCGATACCGCAAGCAGG ACGCCAACGGCGACTACGTC
Product: putative bacteriophage protein
Products: NA
Alternate protein names: Transmembrane Phage Protein
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MNRNERIDDPQASLRAAFGDLRAQAWTALPGIIESYDPGAQTVAIQAGLKVPVRAGDGTLTTVELPQLVDCPAQFPSGGN STLTFPVARGDECLVVFASRCIDAWWQSGGVQELADTRMHSLSDGFALLGFRSQPRVLTNVSTTSAQLRSDDGATFIDLN PTAQTVKIVAPGGFEVVAPTQVLTAATSLTVNSPQSGFSGAVIVQGLFSFLAGMVGSTAEGVAATITGAINFIGSLTSNG KRIDDGHTHGGVQPGDGSSGPVN
Sequences:
>Translated_263_residues MNRNERIDDPQASLRAAFGDLRAQAWTALPGIIESYDPGAQTVAIQAGLKVPVRAGDGTLTTVELPQLVDCPAQFPSGGN STLTFPVARGDECLVVFASRCIDAWWQSGGVQELADTRMHSLSDGFALLGFRSQPRVLTNVSTTSAQLRSDDGATFIDLN PTAQTVKIVAPGGFEVVAPTQVLTAATSLTVNSPQSGFSGAVIVQGLFSFLAGMVGSTAEGVAATITGAINFIGSLTSNG KRIDDGHTHGGVQPGDGSSGPVN >Mature_263_residues MNRNERIDDPQASLRAAFGDLRAQAWTALPGIIESYDPGAQTVAIQAGLKVPVRAGDGTLTTVELPQLVDCPAQFPSGGN STLTFPVARGDECLVVFASRCIDAWWQSGGVQELADTRMHSLSDGFALLGFRSQPRVLTNVSTTSAQLRSDDGATFIDLN PTAQTVKIVAPGGFEVVAPTQVLTAATSLTVNSPQSGFSGAVIVQGLFSFLAGMVGSTAEGVAATITGAINFIGSLTSNG KRIDDGHTHGGVQPGDGSSGPVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27116; Mature: 27116
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNERIDDPQASLRAAFGDLRAQAWTALPGIIESYDPGAQTVAIQAGLKVPVRAGDGTL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEECCCEEEEECCCCEE TTVELPQLVDCPAQFPSGGNSTLTFPVARGDECLVVFASRCIDAWWQSGGVQELADTRMH EEEECCHHHCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHH SLSDGFALLGFRSQPRVLTNVSTTSAQLRSDDGATFIDLNPTAQTVKIVAPGGFEVVAPT HCCCCEEEEEECCCCCEEEECCCCHHHHCCCCCCEEEEECCCCEEEEEECCCCEEEEECH QVLTAATSLTVNSPQSGFSGAVIVQGLFSFLAGMVGSTAEGVAATITGAINFIGSLTSNG HHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC KRIDDGHTHGGVQPGDGSSGPVN CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRNERIDDPQASLRAAFGDLRAQAWTALPGIIESYDPGAQTVAIQAGLKVPVRAGDGTL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEECCCEEEEECCCCEE TTVELPQLVDCPAQFPSGGNSTLTFPVARGDECLVVFASRCIDAWWQSGGVQELADTRMH EEEECCHHHCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHH SLSDGFALLGFRSQPRVLTNVSTTSAQLRSDDGATFIDLNPTAQTVKIVAPGGFEVVAPT HCCCCEEEEEECCCCCEEEECCCCHHHHCCCCCCEEEEECCCCEEEEEECCCCEEEEECH QVLTAATSLTVNSPQSGFSGAVIVQGLFSFLAGMVGSTAEGVAATITGAINFIGSLTSNG HHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC KRIDDGHTHGGVQPGDGSSGPVN CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA