| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027184
Identifier: 238027184
GI number: 238027184
Start: 1721614
End: 1722066
Strand: Direct
Name: 238027184
Synonym: bglu_1g15700
Alternate gene names: NA
Gene position: 1721614-1722066 (Clockwise)
Preceding gene: 238027182
Following gene: 238027185
Centisome position: 44.07
GC content: 65.12
Gene sequence:
>453_bases ATGGCCACCGAAATCGAAATTGGCGGCCAGCGGTACCAGCTCGGCCGCATGAGCGCGATGCAGCAGTTCCACGTGAGCCG CCGCATCGCCACCGTGCTGCCCCCGCTGATCCGCACCTACCTCGACATGGCGACGTCGGACAAGCCGCTGACGAAGAACC TGAAGCTGCTGGCCACCTCGATCGAGCCGGTGATGGAGGCGCTGTCGCAGCTGAAGGACGAGGACGCCGAGTACGTAATC GGCGCGTGCATGCGCGTCGTCGAGCGCCACCACGGCGACGGCTGGGCCCGCGTCTGGTCGCCGACGCAGAACGTCTGCAT GTTCGACGACATCGACATGGGCGCCATGCTGACACTGACCGGCTACGTGATCATGGAGAACCTCGGCCCTTTTATTCAAG GGCTGCTTACCGGCCTAGCGAGCAGCCCGAGCGAGGCGACACCGGCTGGGTAA
Upstream 100 bases:
>100_bases TACGCCATCGGTAGCTCACGCATTGAAACCTCAAGGTATATATGAACAAGAACATTATCTATTTTGATCAATACTCGGTC AACGGATTGCAGAGCTGACC
Downstream 100 bases:
>100_bases AGACGCTGCCGGGCGGAGAGGATTGGCTACTCGCGCCGGTGCACGCGGAGATGTGCAAGTACGAATCGCTGATCAACGGC GTGCTCGGGCTTGAGGACAT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MATEIEIGGQRYQLGRMSAMQQFHVSRRIATVLPPLIRTYLDMATSDKPLTKNLKLLATSIEPVMEALSQLKDEDAEYVI GACMRVVERHHGDGWARVWSPTQNVCMFDDIDMGAMLTLTGYVIMENLGPFIQGLLTGLASSPSEATPAG
Sequences:
>Translated_150_residues MATEIEIGGQRYQLGRMSAMQQFHVSRRIATVLPPLIRTYLDMATSDKPLTKNLKLLATSIEPVMEALSQLKDEDAEYVI GACMRVVERHHGDGWARVWSPTQNVCMFDDIDMGAMLTLTGYVIMENLGPFIQGLLTGLASSPSEATPAG >Mature_149_residues ATEIEIGGQRYQLGRMSAMQQFHVSRRIATVLPPLIRTYLDMATSDKPLTKNLKLLATSIEPVMEALSQLKDEDAEYVIG ACMRVVERHHGDGWARVWSPTQNVCMFDDIDMGAMLTLTGYVIMENLGPFIQGLLTGLASSPSEATPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16501; Mature: 16370
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATEIEIGGQRYQLGRMSAMQQFHVSRRIATVLPPLIRTYLDMATSDKPLTKNLKLLATS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IEPVMEALSQLKDEDAEYVIGACMRVVERHHGDGWARVWSPTQNVCMFDDIDMGAMLTLT HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEECCCCCCHHHHHH GYVIMENLGPFIQGLLTGLASSPSEATPAG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ATEIEIGGQRYQLGRMSAMQQFHVSRRIATVLPPLIRTYLDMATSDKPLTKNLKLLATS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IEPVMEALSQLKDEDAEYVIGACMRVVERHHGDGWARVWSPTQNVCMFDDIDMGAMLTLT HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEECCCCCCHHHHHH GYVIMENLGPFIQGLLTGLASSPSEATPAG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA