| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027173
Identifier: 238027173
GI number: 238027173
Start: 1712999
End: 1714462
Strand: Direct
Name: 238027173
Synonym: bglu_1g15590
Alternate gene names: NA
Gene position: 1712999-1714462 (Clockwise)
Preceding gene: 238027172
Following gene: 238027174
Centisome position: 43.85
GC content: 68.78
Gene sequence:
>1464_bases ATGACGATCCTTCGAATCCGGACCGCCGACCACGCCTGCACGTGTGGCGGCGCGCACGCGGCGCCGGCTCGCGCGCGCAC CCGAGACGGCGTGACCGCGTCGGGCATGTACACGACCGAGCAGCTCGGCACGCGCCAGTCGACGACGCCCGAGGGCTTCC TGCTCTGCGAGGCGGTGCCGATCGCGCGCACCGGCACTCAGGACTACGTTTACAGCGAGCTGCCGGAGCTGGAAGCGAAG GACGGGATCATCATCGCCGAGCGCGACGCCGACGTCCTGTTCGATCCCGAAACGCTCGCGAGTTTCGAGACCAAAACGGT CACGATCGATCACCCGCCGGATTTCGTGACGCCGGCCAACTACATGACCGTCACTCGCGGCACCGTGCGCAACGTGCGAC GCGGCGAGGGCGCGCAGTCCGAGTTGATGCTGGCCGACCTGCTGATCGAGGACGCGGAGGCGATCCGCCGCGTGCAGGCA AAGGAGCTGACGCAGGTCAGCAACGGATACGACGCCGACTACGAGCAAATCGCGCCGGGGCGGGCGCGTCAGGTGCGGAT CGTGGGAAACCACGTTGCGCTCGTGAAAAACGCCCGCTGTGGCCCGGTCTGTTCGATCGGGGATAGCAGTCCCAACCTAC TCCCGACAGGAGATTCCAGAATGGCAACCACGAAGACCTCGAAGTTCGTCGACGCGCTGCGCAAGGCATTCATGACGCGC GACGCCGATGCATTCGAGAAGGCAGCAACCGAGATGACCGGCGACGAGGGCGCCGAGCCCGGCGACGGCCAGCCGCAGAT CCACATCCACATGCCCGGCACGGCCGAGGCGAAGCCGGCGGCCGGCGCTACGGGCGACGACGGCGGCGGTGCCGGCGCCG ACGACCCGATCGCCAAGGTGCTCGCCGCGGTGCAGGGCGTCGACGGCAAGCTCACGGCGCTCGCCGAGCGCGTCACGAAG CTCGAGGCCGGTGGTACGCCGACGGGCGACGTCGATCCCGACGACGACCCGGACGACGATCCGACGATGGACAGTGATCC CGACGACAACTCGGACACGAAGGCCGCGAAGACCGGCGACAGCAAGGGCCTGGCCGACGAGTTCCGCCAGGCGCTGTCGC TGGCCGAGATTCTCGCTCCGGGCGTGCGCCTGCCGACGTTCGACGCGAAGGCTGTGCGCAAGAAGACGTCCGACTCGCTG TGCGTGCTGCGCCGGCGCGCGCTGCGCGCCGCGCTCGACAACGAGAACGCCGAAACCGTGAAGTCGGTGCTCGGCGGCGC GGACGTGAACGGCATGCCGTGCGCGGTCGTGGCGGGCTACTTCAACGCCGCCGCCGCGCTGGTGAAGGGCAAGAACACGG CCGCGATGACGCGTCAGACCGGTGACGCCGCCGGCGGCGCGAGCGGTGCCGCGAAGAAGGATATCAACGCAGTCCACGCC CAATTCTGGGCGAACCACAAGTAA
Upstream 100 bases:
>100_bases TAACGTCCGACGGTCCTGAATTCACAGTATAGCGCTGCTTCCACCGCTGCAACTTCCCCTGTTGTAACAAAGACATACGC CGTTCTGGCGCGAATTTCTT
Downstream 100 bases:
>100_bases GGAGCCGACATGCCTTCCCCGTATGAAGCGTATCAATTCCGCATGCCGGCGGGTTTCCCCGGCGACCTGCAGCGCGCCGA GGTGGCGACGATCGAGACGC
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MTILRIRTADHACTCGGAHAAPARARTRDGVTASGMYTTEQLGTRQSTTPEGFLLCEAVPIARTGTQDYVYSELPELEAK DGIIIAERDADVLFDPETLASFETKTVTIDHPPDFVTPANYMTVTRGTVRNVRRGEGAQSELMLADLLIEDAEAIRRVQA KELTQVSNGYDADYEQIAPGRARQVRIVGNHVALVKNARCGPVCSIGDSSPNLLPTGDSRMATTKTSKFVDALRKAFMTR DADAFEKAATEMTGDEGAEPGDGQPQIHIHMPGTAEAKPAAGATGDDGGGAGADDPIAKVLAAVQGVDGKLTALAERVTK LEAGGTPTGDVDPDDDPDDDPTMDSDPDDNSDTKAAKTGDSKGLADEFRQALSLAEILAPGVRLPTFDAKAVRKKTSDSL CVLRRRALRAALDNENAETVKSVLGGADVNGMPCAVVAGYFNAAAALVKGKNTAAMTRQTGDAAGGASGAAKKDINAVHA QFWANHK
Sequences:
>Translated_487_residues MTILRIRTADHACTCGGAHAAPARARTRDGVTASGMYTTEQLGTRQSTTPEGFLLCEAVPIARTGTQDYVYSELPELEAK DGIIIAERDADVLFDPETLASFETKTVTIDHPPDFVTPANYMTVTRGTVRNVRRGEGAQSELMLADLLIEDAEAIRRVQA KELTQVSNGYDADYEQIAPGRARQVRIVGNHVALVKNARCGPVCSIGDSSPNLLPTGDSRMATTKTSKFVDALRKAFMTR DADAFEKAATEMTGDEGAEPGDGQPQIHIHMPGTAEAKPAAGATGDDGGGAGADDPIAKVLAAVQGVDGKLTALAERVTK LEAGGTPTGDVDPDDDPDDDPTMDSDPDDNSDTKAAKTGDSKGLADEFRQALSLAEILAPGVRLPTFDAKAVRKKTSDSL CVLRRRALRAALDNENAETVKSVLGGADVNGMPCAVVAGYFNAAAALVKGKNTAAMTRQTGDAAGGASGAAKKDINAVHA QFWANHK >Mature_486_residues TILRIRTADHACTCGGAHAAPARARTRDGVTASGMYTTEQLGTRQSTTPEGFLLCEAVPIARTGTQDYVYSELPELEAKD GIIIAERDADVLFDPETLASFETKTVTIDHPPDFVTPANYMTVTRGTVRNVRRGEGAQSELMLADLLIEDAEAIRRVQAK ELTQVSNGYDADYEQIAPGRARQVRIVGNHVALVKNARCGPVCSIGDSSPNLLPTGDSRMATTKTSKFVDALRKAFMTRD ADAFEKAATEMTGDEGAEPGDGQPQIHIHMPGTAEAKPAAGATGDDGGGAGADDPIAKVLAAVQGVDGKLTALAERVTKL EAGGTPTGDVDPDDDPDDDPTMDSDPDDNSDTKAAKTGDSKGLADEFRQALSLAEILAPGVRLPTFDAKAVRKKTSDSLC VLRRRALRAALDNENAETVKSVLGGADVNGMPCAVVAGYFNAAAALVKGKNTAAMTRQTGDAAGGASGAAKKDINAVHAQ FWANHK
Specific function: Unknown
COG id: COG3566
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019246 - InterPro: IPR016913 [H]
Pfam domain/function: PF09979 DUF2213 [H]
EC number: NA
Molecular weight: Translated: 51077; Mature: 50946
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILRIRTADHACTCGGAHAAPARARTRDGVTASGMYTTEQLGTRQSTTPEGFLLCEAVP CEEEEEECCCCCCCCCCCCCCCCHHHCCCCCEECCCEEHHHHCCCCCCCCCCEEEEECCC IARTGTQDYVYSELPELEAKDGIIIAERDADVLFDPETLASFETKTVTIDHPPDFVTPAN CCCCCCHHHHHHHCCCCCCCCCEEEEECCCCEEECCHHHHCCCCEEEEECCCCCCCCCCC YMTVTRGTVRNVRRGEGAQSELMLADLLIEDAEAIRRVQAKELTQVSNGYDADYEQIAPG EEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC RARQVRIVGNHVALVKNARCGPVCSIGDSSPNLLPTGDSRMATTKTSKFVDALRKAFMTR CCEEEEEECCEEEEEECCCCCCEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCC DADAFEKAATEMTGDEGAEPGDGQPQIHIHMPGTAEAKPAAGATGDDGGGAGADDPIAKV CHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LAAVQGVDGKLTALAERVTKLEAGGTPTGDVDPDDDPDDDPTMDSDPDDNSDTKAAKTGD HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC SKGLADEFRQALSLAEILAPGVRLPTFDAKAVRKKTSDSLCVLRRRALRAALDNENAETV CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH KSVLGGADVNGMPCAVVAGYFNAAAALVKGKNTAAMTRQTGDAAGGASGAAKKDINAVHA HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCHHHHHHHHHH QFWANHK HHHCCCC >Mature Secondary Structure TILRIRTADHACTCGGAHAAPARARTRDGVTASGMYTTEQLGTRQSTTPEGFLLCEAVP EEEEEECCCCCCCCCCCCCCCCHHHCCCCCEECCCEEHHHHCCCCCCCCCCEEEEECCC IARTGTQDYVYSELPELEAKDGIIIAERDADVLFDPETLASFETKTVTIDHPPDFVTPAN CCCCCCHHHHHHHCCCCCCCCCEEEEECCCCEEECCHHHHCCCCEEEEECCCCCCCCCCC YMTVTRGTVRNVRRGEGAQSELMLADLLIEDAEAIRRVQAKELTQVSNGYDADYEQIAPG EEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC RARQVRIVGNHVALVKNARCGPVCSIGDSSPNLLPTGDSRMATTKTSKFVDALRKAFMTR CCEEEEEECCEEEEEECCCCCCEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCC DADAFEKAATEMTGDEGAEPGDGQPQIHIHMPGTAEAKPAAGATGDDGGGAGADDPIAKV CHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LAAVQGVDGKLTALAERVTKLEAGGTPTGDVDPDDDPDDDPTMDSDPDDNSDTKAAKTGD HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC SKGLADEFRQALSLAEILAPGVRLPTFDAKAVRKKTSDSLCVLRRRALRAALDNENAETV CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH KSVLGGADVNGMPCAVVAGYFNAAAALVKGKNTAAMTRQTGDAAGGASGAAKKDINAVHA HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCHHHHHHHHHH QFWANHK HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]