| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hflX [H]
Identifier: 238027077
GI number: 238027077
Start: 1601988
End: 1603184
Strand: Direct
Name: hflX [H]
Synonym: bglu_1g14560
Alternate gene names: 238027077
Gene position: 1601988-1603184 (Clockwise)
Preceding gene: 238027076
Following gene: 238027078
Centisome position: 41.01
GC content: 66.58
Gene sequence:
>1197_bases TTGACACCCGCCAATTTGACCAACGCCGCATTAGTGGGCATCGATTTCGGCAAGACCGATTTCGAAGCCAGTCTCGAAGA ACTCAGCCTGCTTGCTTCCAGCGCGGGCGCCCATCCCGCAGTCACCCTCACCGGACGACGTTCGAGCCCCGACGCCGCGA TGTTCATCGGCAGCGGCAAGGCCGAGGAACTGCGCCTCGCCTGCGACGCGAACGAGATCGACATCGTCATCTTCAATCAT CCGCTCGCGCCCGCGCAGCAGCGCAATCTGGAGCGCACGCTGAACCGGCGCGTGGTCGATCGCACCAGCCTGATCCTCGA CATCTTCGCGCAGCGCGCGCGCAGCCACGAAGGCAAGCTGCAGGTGGAGCTCGCGCAGCTGCAGTACCTGTCGACGCGGC TGATCCGCGCCTGGACCCACCTCGAACGCCAGAAGGGCGGGATCGGCCTGCGCGGCCCCGGCGAGACGCAGCTCGAGACC GACCGCCGGCTGATCGGCGAGCGCATCAAGATGCTGAAGTCGCGGCTCGACAAGCTGCGCCGCCAGCACAACACGCAGCG TCGCCAGCGCGAACGCAACCGCACGATGTCGGTGTCGCTGGTCGGCTATACGAACGCGGGCAAATCGACGCTGTTCAACG CGCTGACGAAGGCGCAGGCCTATGCGGCCGACCAGCTGTTCGCGACGCTCGACACGACTTCACGGCGCGTCTATCTCGGC GACGAGGTGGGCCAGATCGTGGTGTCCGACACGGTCGGCTTCATCCGCGAACTGCCTCACCAGCTCGTCGCCGCGTTCCG TGCGACGCTCGAGGAGACGATCCACGCGGATCTGCTGCTGCACGTGGTCGATGCGTCTAGCGCGGTGCGGCTCGAGCAGA TCGAGCAGGTCAACGACGTGTTGCACGAGATCGGCGCGGACGCGATCCGGCAGGTGCTCGTCTTCAACAAGATCGATGCG GTGCCGGAACTCGCGGCCCGCGGCGATGCGGTCGAGCGTGACGAGTATGGTAATATTTCGCGCGTCTTTTTGAGCGCGCG CAGCGGCCAGGGGCTCGATGCGCTGCGCAGCGCCATTGCCGAAATCGCGACCAGCGACCAGCAGCTCTCCGGCGCGGTGT CGCTGCCCGAGCCGACGCGCGACGGCGGGCTGGCCGAACCGCGCGACGACCACACGGTTTCCGAACACGGGCACTAG
Upstream 100 bases:
>100_bases CCCGGTGAATTTCCACCCGGATGCGGAAGGCGCGTCCTCCTAACCCGATTGCCGCGGCTGGCGCCCGTCGCCGCCGGCGA TCCACGCCAGCCGCCTTATC
Downstream 100 bases:
>100_bases CCGGCCGCTGGCCGGACAGTCGACGCCCAATCTGGTGAACAAACTCAGGTGAACGATTACAACGAGCGGAGTACCTGGCT GCGCAAGCGTCCGATGCTGT
Product: GTP-binding proten HflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTPANLTNAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAAMFIGSGKAEELRLACDANEIDIVIFNH PLAPAQQRNLERTLNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRLIRAWTHLERQKGGIGLRGPGETQLET DRRLIGERIKMLKSRLDKLRRQHNTQRRQRERNRTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLG DEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLHEIGADAIRQVLVFNKIDA VPELAARGDAVERDEYGNISRVFLSARSGQGLDALRSAIAEIATSDQQLSGAVSLPEPTRDGGLAEPRDDHTVSEHGH
Sequences:
>Translated_398_residues MTPANLTNAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAAMFIGSGKAEELRLACDANEIDIVIFNH PLAPAQQRNLERTLNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRLIRAWTHLERQKGGIGLRGPGETQLET DRRLIGERIKMLKSRLDKLRRQHNTQRRQRERNRTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLG DEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLHEIGADAIRQVLVFNKIDA VPELAARGDAVERDEYGNISRVFLSARSGQGLDALRSAIAEIATSDQQLSGAVSLPEPTRDGGLAEPRDDHTVSEHGH >Mature_397_residues TPANLTNAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAAMFIGSGKAEELRLACDANEIDIVIFNHP LAPAQQRNLERTLNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRLIRAWTHLERQKGGIGLRGPGETQLETD RRLIGERIKMLKSRLDKLRRQHNTQRRQRERNRTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGD EVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLHEIGADAIRQVLVFNKIDAV PELAARGDAVERDEYGNISRVFLSARSGQGLDALRSAIAEIATSDQQLSGAVSLPEPTRDGGLAEPRDDHTVSEHGH
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=232, Percent_Identity=36.6379310344828, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI310133116, Length=230, Percent_Identity=36.9565217391304, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI310124269, Length=212, Percent_Identity=37.7358490566038, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI310124267, Length=212, Percent_Identity=37.7358490566038, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI310124171, Length=212, Percent_Identity=37.7358490566038, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI310124169, Length=212, Percent_Identity=37.7358490566038, Blast_Score=114, Evalue=2e-25, Organism=Escherichia coli, GI1790615, Length=380, Percent_Identity=54.4736842105263, Blast_Score=374, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17561038, Length=289, Percent_Identity=31.1418685121107, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24650079, Length=324, Percent_Identity=31.7901234567901, Blast_Score=106, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 43781; Mature: 43650
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPANLTNAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAAMFIGSGK CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCC AEELRLACDANEIDIVIFNHPLAPAQQRNLERTLNRRVVDRTSLILDIFAQRARSHEGKL CCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE QVELAQLQYLSTRLIRAWTHLERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDKLR EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RQHNTQRRQRERNRTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLG HHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC DEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDV CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LHEIGADAIRQVLVFNKIDAVPELAARGDAVERDEYGNISRVFLSARSGQGLDALRSAIA HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHH EIATSDQQLSGAVSLPEPTRDGGLAEPRDDHTVSEHGH HHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TPANLTNAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAAMFIGSGK CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCC AEELRLACDANEIDIVIFNHPLAPAQQRNLERTLNRRVVDRTSLILDIFAQRARSHEGKL CCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE QVELAQLQYLSTRLIRAWTHLERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDKLR EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RQHNTQRRQRERNRTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLG HHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC DEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDV CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LHEIGADAIRQVLVFNKIDAVPELAARGDAVERDEYGNISRVFLSARSGQGLDALRSAIA HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHH EIATSDQQLSGAVSLPEPTRDGGLAEPRDDHTVSEHGH HHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]