Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238026752

Identifier: 238026752

GI number: 238026752

Start: 1218936

End: 1220207

Strand: Reverse

Name: 238026752

Synonym: bglu_1g11100

Alternate gene names: NA

Gene position: 1220207-1218936 (Counterclockwise)

Preceding gene: 238026753

Following gene: 238026751

Centisome position: 31.24

GC content: 74.29

Gene sequence:

>1272_bases
ATGCACAATCGATCCAGACTGATTTCCCTCACCTGCGCGCTCGCGGCCTCGGCCGTGCTGGCGGCCTGTTCTTCGGCTCC
CAAGCCGCTTTACACGCAGGAGCAGTTCGACGCGTCGAGCAGCCCTTACACGCACACCTTCCACGAGAACGCGACGGCCA
CCTGCGAGGCGGCGCGGCGCGCGCTGCTGAGCCAGGGCTACATCACCAACCTGACACGGCCCGACACCGTGGACGGCAGC
AAGAACTTCCAGCCCAACAGCGATTCGCACGTGACGATCGAGTTTCACGTGGTCTGCGTCGACGCGGACGCCGATTCGAC
CTCGGCCATCGCCTACGTGAACGCGGTGCAGGATCGCTACACGCTGAAGAAGGCCACCACCTCGGCGAGCGTCGGGCTCT
CGGTGCTCGGTTCGGTGTCGCTGCCGATCGGCTCGAGCGACGACTCGATGGTGAAGATCGCGAGCGAAACGATTCCCGCC
GGGGTGTTCTACGACCGCTTCTTCAAGCTGGTCGACCACTTCCTGAAGGTCGATCCGGCGCGGCACGGCAAGGCCGCCGC
CAAAGCCGCCGAGAAGGAGCCGGTGGCACCGCTGCCGGAGCCGGCGCCAAGCACCGGCGCGCCCGGCGACGACGGCGCGG
TGAAGCTGAAGACGCCGGCCGTGCCCACCCCGTCGGCGCCCGCGCCGGTGTCGGGCCTCGCGCCGGTGCCGGTCGCGGCG
GCCGGCGGCGCGCTCGCCGCCGCCGTGCCGAACCATACCGTGACGGCCACGCCGGCAGCGTTCCCGGCGGTGCCGCCGGC
CGCCGCCTCGCCTACGCAGGCCGCAACGAACCGCGGCGCGGGGGCGGCCCCCGCGAACGCGACGCACGACGCGAACCCGG
CGAACCCGGCACCGAGCCCGGCCACTGGCTCGGCGAGCGGCCCGCAGCCCGTGGTTGCCTCGACCGGCACCTCGGCCGTG
ACCACCGGCTCGGCCGGCCGGCCGATCGCCACGCCGTCGGCCGATGCGGGGGCCGCGCCGGCCGACGTGCAGTCGGCGCT
GGCGATGCCGCACGCTTCGGCCGCGAAGCCGGCCACGGCGGCCGGTCCGATCCCGGCATCGCAGGCCGCAGCGGCCGCCG
CCGACGCAGGCAGCGCCGCAGCCGGCGCCGCGAACCCGCCGGCCGCCAGCGCCCCCGCCGCCGCTCAGCCGGCATCGGCT
GTCCCGGCCGCCCCCGCTTCCACCCCCGCCCCCGCTTCCGCTGCTCCGGCAGCGGCCGGCAGCGCGCAATAA

Upstream 100 bases:

>100_bases
ATCGGGGGAAACTATAATAGCGGCCGGTCACGCCTTCGGTCCGGCGCCGCCTCGAGCGGCGGCGGGCGCGTGCCACGTGG
CCCACCCTCTACCCGACGCC

Downstream 100 bases:

>100_bases
GCGCGCGCCGCGCTCGATCCCAGCCGGCCTCACCTCGGGTCCGTTGCGCTCGAGTTCGGCGATGCACGCCATCTCGTCAG
CACCGGGCCGCGGGTCGCGG

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein Transmembrane; Lipoprotein Protein; Large Tegument Domain-Containing Protein

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MHNRSRLISLTCALAASAVLAACSSAPKPLYTQEQFDASSSPYTHTFHENATATCEAARRALLSQGYITNLTRPDTVDGS
KNFQPNSDSHVTIEFHVVCVDADADSTSAIAYVNAVQDRYTLKKATTSASVGLSVLGSVSLPIGSSDDSMVKIASETIPA
GVFYDRFFKLVDHFLKVDPARHGKAAAKAAEKEPVAPLPEPAPSTGAPGDDGAVKLKTPAVPTPSAPAPVSGLAPVPVAA
AGGALAAAVPNHTVTATPAAFPAVPPAAASPTQAATNRGAGAAPANATHDANPANPAPSPATGSASGPQPVVASTGTSAV
TTGSAGRPIATPSADAGAAPADVQSALAMPHASAAKPATAAGPIPASQAAAAAADAGSAAAGAANPPAASAPAAAQPASA
VPAAPASTPAPASAAPAAAGSAQ

Sequences:

>Translated_423_residues
MHNRSRLISLTCALAASAVLAACSSAPKPLYTQEQFDASSSPYTHTFHENATATCEAARRALLSQGYITNLTRPDTVDGS
KNFQPNSDSHVTIEFHVVCVDADADSTSAIAYVNAVQDRYTLKKATTSASVGLSVLGSVSLPIGSSDDSMVKIASETIPA
GVFYDRFFKLVDHFLKVDPARHGKAAAKAAEKEPVAPLPEPAPSTGAPGDDGAVKLKTPAVPTPSAPAPVSGLAPVPVAA
AGGALAAAVPNHTVTATPAAFPAVPPAAASPTQAATNRGAGAAPANATHDANPANPAPSPATGSASGPQPVVASTGTSAV
TTGSAGRPIATPSADAGAAPADVQSALAMPHASAAKPATAAGPIPASQAAAAAADAGSAAAGAANPPAASAPAAAQPASA
VPAAPASTPAPASAAPAAAGSAQ
>Mature_423_residues
MHNRSRLISLTCALAASAVLAACSSAPKPLYTQEQFDASSSPYTHTFHENATATCEAARRALLSQGYITNLTRPDTVDGS
KNFQPNSDSHVTIEFHVVCVDADADSTSAIAYVNAVQDRYTLKKATTSASVGLSVLGSVSLPIGSSDDSMVKIASETIPA
GVFYDRFFKLVDHFLKVDPARHGKAAAKAAEKEPVAPLPEPAPSTGAPGDDGAVKLKTPAVPTPSAPAPVSGLAPVPVAA
AGGALAAAVPNHTVTATPAAFPAVPPAAASPTQAATNRGAGAAPANATHDANPANPAPSPATGSASGPQPVVASTGTSAV
TTGSAGRPIATPSADAGAAPADVQSALAMPHASAAKPATAAGPIPASQAAAAAADAGSAAAGAANPPAASAPAAAQPASA
VPAAPASTPAPASAAPAAAGSAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40920; Mature: 40920

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNRSRLISLTCALAASAVLAACSSAPKPLYTQEQFDASSSPYTHTFHENATATCEAARR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHHHH
ALLSQGYITNLTRPDTVDGSKNFQPNSDSHVTIEFHVVCVDADADSTSAIAYVNAVQDRY
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEHHHHHHHH
TLKKATTSASVGLSVLGSVSLPIGSSDDSMVKIASETIPAGVFYDRFFKLVDHFLKVDPA
HHHHHHCHHHHHHHHHCEEECCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCC
RHGKAAAKAAEKEPVAPLPEPAPSTGAPGDDGAVKLKTPAVPTPSAPAPVSGLAPVPVAA
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH
AGGALAAAVPNHTVTATPAAFPAVPPAAASPTQAATNRGAGAAPANATHDANPANPAPSP
CCCEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
ATGSASGPQPVVASTGTSAVTTGSAGRPIATPSADAGAAPADVQSALAMPHASAAKPATA
CCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
AGPIPASQAAAAAADAGSAAAGAANPPAASAPAAAQPASAVPAAPASTPAPASAAPAAAG
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAQ
CCC
>Mature Secondary Structure
MHNRSRLISLTCALAASAVLAACSSAPKPLYTQEQFDASSSPYTHTFHENATATCEAARR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHHHH
ALLSQGYITNLTRPDTVDGSKNFQPNSDSHVTIEFHVVCVDADADSTSAIAYVNAVQDRY
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEHHHHHHHH
TLKKATTSASVGLSVLGSVSLPIGSSDDSMVKIASETIPAGVFYDRFFKLVDHFLKVDPA
HHHHHHCHHHHHHHHHCEEECCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCC
RHGKAAAKAAEKEPVAPLPEPAPSTGAPGDDGAVKLKTPAVPTPSAPAPVSGLAPVPVAA
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH
AGGALAAAVPNHTVTATPAAFPAVPPAAASPTQAATNRGAGAAPANATHDANPANPAPSP
CCCEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
ATGSASGPQPVVASTGTSAVTTGSAGRPIATPSADAGAAPADVQSALAMPHASAAKPATA
CCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
AGPIPASQAAAAAADAGSAAAGAANPPAASAPAAAQPASAVPAAPASTPAPASAAPAAAG
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA