| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yieH [H]
Identifier: 238026751
GI number: 238026751
Start: 1217347
End: 1218087
Strand: Reverse
Name: yieH [H]
Synonym: bglu_1g11090
Alternate gene names: 238026751
Gene position: 1218087-1217347 (Counterclockwise)
Preceding gene: 238026752
Following gene: 238026749
Centisome position: 31.18
GC content: 72.6
Gene sequence:
>741_bases ATGCCATCCCCCCTCCCCACCCCGCCGCGCGAGGGCCGCGCGCTGATCAGTGACTGCGACGGCGTGCTGGTCGACAGCGA AGCCATCGCCGAGCGAATCGTGATCGACCGGCTCGAAGCGCTCTGGCAGATCGAAGGCGTGCACGACGCGATCCGTCCGC TGCTCGGCATGCGCACCGCCGTCGTGCTGACCGAGGCCGCCGCTGCGCTGGGCCGCGTCATCAGCGAGGAACAGATCCAT TCGATTCGCGAGGAAATCCGCGCGCGCGCGGGCGAGGCGCCGCAGATTCCGGGCGCCGTCGAGGCGCTGCAGGCGCTGCC GCTGCTGCTCGCATGCGCCAGCAACAGCGATCTCGACTACGTGGAGCGCGTGGTCGCGCGGCTCGGCCTGGACGCATGCT TCGGCGGCCGGCTCTTCACGGGCGACCGCGTCGCGCAGCCCAAGCCGGCACCCGACGTCTATCTGGCCGCCTCGCGCGAA TTGCGGGTGCCGCCCGCCGGCTGCGCGGTGATCGAGGACAGCGTGACGGGAGCGCGCGCCGCGCTCGCGGCCGGCATGAC CGTGCTCGGCTTCACCGGCAGCGCCCATCATCCGGGCGAACGCCGCGCGGCGCTGCGCGAGATCGGCGTCCATGTAACGT TCGAGCGCATGAGCGAGCTGCCGGGCCTGGTCGAGCGCTGGCTCGGTGACGAATTCGGCGTGGCGAGCGAGGCAGGCGAG CGCGCCGGCTCGGCAGCCTGA
Upstream 100 bases:
>100_bases TGCGGCGACGCTGCCCCGAAGCCGCTTGCCGCAAGCCGGCCGCGCCGTGCCTCGTGCCGACCGATGTTACCGGTATGATT AGCCGTTACAGGAGAAACAC
Downstream 100 bases:
>100_bases CGACCGCCGGCATCGCGAACCGCGCGGACCGGGGCAGGAAAGCCGCGCTCGGGCAGCCGGATGACCGGCGCGGCGGCCCG TCAGGCGGCCGCGATCACGT
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPSPLPTPPREGRALISDCDGVLVDSEAIAERIVIDRLEALWQIEGVHDAIRPLLGMRTAVVLTEAAAALGRVISEEQIH SIREEIRARAGEAPQIPGAVEALQALPLLLACASNSDLDYVERVVARLGLDACFGGRLFTGDRVAQPKPAPDVYLAASRE LRVPPAGCAVIEDSVTGARAALAAGMTVLGFTGSAHHPGERRAALREIGVHVTFERMSELPGLVERWLGDEFGVASEAGE RAGSAA
Sequences:
>Translated_246_residues MPSPLPTPPREGRALISDCDGVLVDSEAIAERIVIDRLEALWQIEGVHDAIRPLLGMRTAVVLTEAAAALGRVISEEQIH SIREEIRARAGEAPQIPGAVEALQALPLLLACASNSDLDYVERVVARLGLDACFGGRLFTGDRVAQPKPAPDVYLAASRE LRVPPAGCAVIEDSVTGARAALAAGMTVLGFTGSAHHPGERRAALREIGVHVTFERMSELPGLVERWLGDEFGVASEAGE RAGSAA >Mature_245_residues PSPLPTPPREGRALISDCDGVLVDSEAIAERIVIDRLEALWQIEGVHDAIRPLLGMRTAVVLTEAAAALGRVISEEQIHS IREEIRARAGEAPQIPGAVEALQALPLLLACASNSDLDYVERVVARLGLDACFGGRLFTGDRVAQPKPAPDVYLAASREL RVPPAGCAVIEDSVTGARAALAAGMTVLGFTGSAHHPGERRAALREIGVHVTFERMSELPGLVERWLGDEFGVASEAGER AGSAA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=212, Percent_Identity=25.9433962264151, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1788021, Length=192, Percent_Identity=31.7708333333333, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 25976; Mature: 25845
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPLPTPPREGRALISDCDGVLVDSEAIAERIVIDRLEALWQIEGVHDAIRPLLGMRTA CCCCCCCCCCCCCHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLTEAAAALGRVISEEQIHSIREEIRARAGEAPQIPGAVEALQALPLLLACASNSDLDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH VERVVARLGLDACFGGRLFTGDRVAQPKPAPDVYLAASRELRVPPAGCAVIEDSVTGARA HHHHHHHHCHHHHCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCHHHHH ALAAGMTVLGFTGSAHHPGERRAALREIGVHVTFERMSELPGLVERWLGDEFGVASEAGE HHHHCCHHEECCCCCCCCHHHHHHHHHHCCEEEHHHHHHCHHHHHHHCCCCCCCHHHHHH RAGSAA HCCCCC >Mature Secondary Structure PSPLPTPPREGRALISDCDGVLVDSEAIAERIVIDRLEALWQIEGVHDAIRPLLGMRTA CCCCCCCCCCCCHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLTEAAAALGRVISEEQIHSIREEIRARAGEAPQIPGAVEALQALPLLLACASNSDLDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH VERVVARLGLDACFGGRLFTGDRVAQPKPAPDVYLAASRELRVPPAGCAVIEDSVTGARA HHHHHHHHCHHHHCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCHHHHH ALAAGMTVLGFTGSAHHPGERRAALREIGVHVTFERMSELPGLVERWLGDEFGVASEAGE HHHHCCHHEECCCCCCCCHHHHHHHHHHCCEEEHHHHHHCHHHHHHHCCCCCCCHHHHHH RAGSAA HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]