| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026699
Identifier: 238026699
GI number: 238026699
Start: 1153838
End: 1154812
Strand: Reverse
Name: 238026699
Synonym: bglu_1g10560
Alternate gene names: NA
Gene position: 1154812-1153838 (Counterclockwise)
Preceding gene: 238026700
Following gene: 238026698
Centisome position: 29.56
GC content: 71.38
Gene sequence:
>975_bases ATGTCCAACTCCAACTTCAGCAAGGCCAGCCTGCCCGCCGCCTGTCTGGCCGTCGTCTATCTCTGCCTCGTCTCGAGCGT GGGCAAGCTGATCCACAACGAGTTCGCGTTCTTCCCGGAACTCGCCGCGCTCGGCTACGGCATCTTCATGCGGCCGAACG GGCCGTGGGCCAAGGCGCCGCTGATGGTGCTGGCCACCCCCACCGTCACCGCGCTGTGGGGCATGGGCGTGGCGAGCCAC CTGCCGTATGGCGCGCCGGCCGCGATGCTCTGCATCGCGGGCGCGATCCTGATCGTGAAGGCGATGAAGTCGCCGGTGTT CCCGGCCGTGCCGGCCGCGTTCCTGCCGCTCGTGTTCGGCGTGACGAGCCTGGACTACGTCGTGTTCATCGCCTGCGATA CCGGCGTGCTCGCGCTGCTGTCGATGATCTGCCGGCCCGCGTGGCAGCCCGGCGCCGGCGTGCCGGCCGCGGCGCCCGGC GCGATGCCGGCCTCGACGCACGCCGCCGTCGGCAAGGCCACGCGCTGGCTCGCGTACTGGTGCGTGCTGGCGATCGCCTA TCTCCTGGCTGACCGCGCCGGGCTCCGGCTGATCCTGTTCCCGCCGCTGCTCGTGCTCGCCTACGAGATGCTGATCCGGC CCGAGCACTGCCCATGGGCGCGGCGCGCCACGCTGGTTCCCGTGCTGTGCGTGACGTGCGCGACGCTCGGCTGGGCGAGC GTCGCGCTGTTCGGCACCGGGCCGCTGTCGGTGCTGTTCGCGTTCGGCCTGGCCATCGTCCTGATCCGCGCCGTGGACGC GTTCGTGCTGCCGGCGCTGGCCATCTCGGTGATTCCGCAGATCATGCCGCAGGTGGACTGGAAATATCCGCTCGCGATCG GCACGGGTACCTGCGTGGTGGTGGCCGCGCGCGCGGTGCTCAACGCGATCGAGCAGGGGCAGGCGCGCGCCGCCGGGGGC CGCGCGGTCGAGTAA
Upstream 100 bases:
>100_bases CGCAAGCCCCCGCCGTGCCGCCGCCGCGCGCGGCGGCACGGCGCGCCGCTTCGCCCCGGTACGATGCTCCGACAATCGTT TCGCAGTCCGCTCTCCCGCC
Downstream 100 bases:
>100_bases CGGCAAGCATGAGGGGCCCGCCCGTGCGCTGCGGGCGGGCCCGGCAACGCGGCCGCGATGGCGGGCCGCGGGCGCTTGCA CGCCATCGACATCGAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSNSNFSKASLPAACLAVVYLCLVSSVGKLIHNEFAFFPELAALGYGIFMRPNGPWAKAPLMVLATPTVTALWGMGVASH LPYGAPAAMLCIAGAILIVKAMKSPVFPAVPAAFLPLVFGVTSLDYVVFIACDTGVLALLSMICRPAWQPGAGVPAAAPG AMPASTHAAVGKATRWLAYWCVLAIAYLLADRAGLRLILFPPLLVLAYEMLIRPEHCPWARRATLVPVLCVTCATLGWAS VALFGTGPLSVLFAFGLAIVLIRAVDAFVLPALAISVIPQIMPQVDWKYPLAIGTGTCVVVAARAVLNAIEQGQARAAGG RAVE
Sequences:
>Translated_324_residues MSNSNFSKASLPAACLAVVYLCLVSSVGKLIHNEFAFFPELAALGYGIFMRPNGPWAKAPLMVLATPTVTALWGMGVASH LPYGAPAAMLCIAGAILIVKAMKSPVFPAVPAAFLPLVFGVTSLDYVVFIACDTGVLALLSMICRPAWQPGAGVPAAAPG AMPASTHAAVGKATRWLAYWCVLAIAYLLADRAGLRLILFPPLLVLAYEMLIRPEHCPWARRATLVPVLCVTCATLGWAS VALFGTGPLSVLFAFGLAIVLIRAVDAFVLPALAISVIPQIMPQVDWKYPLAIGTGTCVVVAARAVLNAIEQGQARAAGG RAVE >Mature_323_residues SNSNFSKASLPAACLAVVYLCLVSSVGKLIHNEFAFFPELAALGYGIFMRPNGPWAKAPLMVLATPTVTALWGMGVASHL PYGAPAAMLCIAGAILIVKAMKSPVFPAVPAAFLPLVFGVTSLDYVVFIACDTGVLALLSMICRPAWQPGAGVPAAAPGA MPASTHAAVGKATRWLAYWCVLAIAYLLADRAGLRLILFPPLLVLAYEMLIRPEHCPWARRATLVPVLCVTCATLGWASV ALFGTGPLSVLFAFGLAIVLIRAVDAFVLPALAISVIPQIMPQVDWKYPLAIGTGTCVVVAARAVLNAIEQGQARAAGGR AVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33864; Mature: 33733
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS01047 HMA_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSNFSKASLPAACLAVVYLCLVSSVGKLIHNEFAFFPELAALGYGIFMRPNGPWAKAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC LMVLATPTVTALWGMGVASHLPYGAPAAMLCIAGAILIVKAMKSPVFPAVPAAFLPLVFG EEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VTSLDYVVFIACDTGVLALLSMICRPAWQPGAGVPAAAPGAMPASTHAAVGKATRWLAYW HHHHCEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH CVLAIAYLLADRAGLRLILFPPLLVLAYEMLIRPEHCPWARRATLVPVLCVTCATLGWAS HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VALFGTGPLSVLFAFGLAIVLIRAVDAFVLPALAISVIPQIMPQVDWKYPLAIGTGTCVV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHH VAARAVLNAIEQGQARAAGGRAVE HHHHHHHHHHHHCCHHCCCCCCCC >Mature Secondary Structure SNSNFSKASLPAACLAVVYLCLVSSVGKLIHNEFAFFPELAALGYGIFMRPNGPWAKAP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC LMVLATPTVTALWGMGVASHLPYGAPAAMLCIAGAILIVKAMKSPVFPAVPAAFLPLVFG EEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VTSLDYVVFIACDTGVLALLSMICRPAWQPGAGVPAAAPGAMPASTHAAVGKATRWLAYW HHHHCEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH CVLAIAYLLADRAGLRLILFPPLLVLAYEMLIRPEHCPWARRATLVPVLCVTCATLGWAS HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VALFGTGPLSVLFAFGLAIVLIRAVDAFVLPALAISVIPQIMPQVDWKYPLAIGTGTCVV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHH VAARAVLNAIEQGQARAAGGRAVE HHHHHHHHHHHHCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA