| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026664
Identifier: 238026664
GI number: 238026664
Start: 1096734
End: 1098242
Strand: Reverse
Name: 238026664
Synonym: bglu_1g10180
Alternate gene names: NA
Gene position: 1098242-1096734 (Counterclockwise)
Preceding gene: 238026665
Following gene: 238026647
Centisome position: 28.11
GC content: 70.84
Gene sequence:
>1509_bases ATGACGACATTCACCGAACACCTGCCGCAAGCAGCGCTGCTCGACAAGCTGTGGACCCGCATGAGCGAGCGCGGCGACTT TCCGATGCTGTCGGATTCGCTGCGCGCGACGATGGCCGCGATCGACAGCGACAATCTCGATTTCACGGCGCTGGTCGGCG TGGTGCTGTCGGACTTCGCGCTGACCCAGAAGGTGATCCGGCTCGCGAACTCGGCGATGTACATCGCGTTCGGCGGCAAC ATCACCACCGTGACCCGCGCCCTGATGGTGCTGGGCATGGACGCGGTCGGCCATCTGGTGGTCGGCCTCAAGCTCGTCGA CCATTTCCACCAGAGCAACTCGCAGCGCATCGAAGCGAAGCTCGAACTGAACCGCGCGCTGCTCTCGGGCTGCGTGGCGC GCCGCCTGACCGAGGATGCCGATCTGCGCGCCGGCGAGGAAGCCACCGTCTGCACGCTGATGCGCCAGGTCGGCAAGCTG CTGGTGGCGTTCTACCTCGACGTCGAATGGGATGCGATCCGCCAGCGCGCGGCCGAGCTCGGCGTCGACGAGGCCTCGGC CTGCGCCGAGGTGCTCGGCGTGGGCTTCGACGAGATCGGCCGCGAAGCCGCCACGCGCTGGCGGCTGCCCGACACGATCC GCACCAGCATCGCCCCGTTCGATCCGCACGAGGAACCCGAGGGCCAGGGCGACCCGGACGCGCGCATCGACCGCGCCGAT CACGAGCGGCGCCAGTGGCTGCGCGCCGTCAGCGACTGCTCGACCGAGGTGGCGGCCGTGATGACGGCGCCCGGCCTCAC CACGGTGCAGCGCGATGCGCGCCTGGCCGCGCTCGCGCAGCGCTTCACGCCGACGCTCGACATCGACGCGGACGCGCTGG TGGCGATCACGCGCGACCTCGCGCACGACGAGACCAGCGACACCGTGCTGCGCGAGATCGTCGCCCTGCGCGCCAACGCG GCCGCGCTCGAGCGCGCCGCGGCCGAGCCGCAGGCGACGCTCGACACGGGGCTGGCCGACCTGCGCGCGCTGCCGTCCGA GAATCAGCAGGAGCCGGTGCTCGCGCTCGCCTCCGAGAGCGTGCTGGCCAGCCTCGCGCTGAGCCGCACGGTGATGTTCG TGCGCGGCGAGGACGGCACCTTCGCCGCGAAGCTCGGCTTCGGCCACGGCGTCGAGGCCGCGCTCGGCCGGATGCGCTTT CACGAGACCTTCGAGCCCGACGTGTTCCATCTGGCGATCTCGAACTCGGTGGGCATCTTCATCGAGGACGCGCACGAGCC GAAGATGCTGCGGCGGCTGCCGGGCTGGTATCGCGACACGCTGCACCAGGTCCACGGCTTCGTGCTGCTGCCGGTGCGCA CCGGCGAGCGCTGCGTGGCGCTGCTCTACGGCGACTGGTCCGGCGCGCAGCCGACCCGGCGCATCTCGCATCGCGACATG GCCACGCTGAACCACATCGGCGCCGAGCTCGGCCGCTTCTTCGCGAAGTCCGACGCGGGCACGGCCTGA
Upstream 100 bases:
>100_bases CTGCCGCGCACTGCCGTCCGACGAACTCGCCCAACGTTTCGAGGCTCGCGAGCTTCGCGTGCGCGAACCGGCCTGACGGC CGCGACCGAGCCATAACCGT
Downstream 100 bases:
>100_bases GCGCCGGGCCCGGCGCCCCTCGCCCGGACCGTTGCCCGGGCCGGTCGAACGCCGCGAAAAAAAGCCGGCGCCCCCCCTTG CCCGGGAAGCGCCGGCCCGG
Product: putative signal transduction protein
Products: NA
Alternate protein names: Serine/Threonine Protein Kinase; Metal Dependent Phosphohydrolase; Protein KinaseGAF; GAF-Domain-Containing Protein; Response Regulator Receiver Modulated Diguanylate Cyclase; GAF Domain-Containing Protein; HDIG Domain Protein; HDOD Domain Family
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MTTFTEHLPQAALLDKLWTRMSERGDFPMLSDSLRATMAAIDSDNLDFTALVGVVLSDFALTQKVIRLANSAMYIAFGGN ITTVTRALMVLGMDAVGHLVVGLKLVDHFHQSNSQRIEAKLELNRALLSGCVARRLTEDADLRAGEEATVCTLMRQVGKL LVAFYLDVEWDAIRQRAAELGVDEASACAEVLGVGFDEIGREAATRWRLPDTIRTSIAPFDPHEEPEGQGDPDARIDRAD HERRQWLRAVSDCSTEVAAVMTAPGLTTVQRDARLAALAQRFTPTLDIDADALVAITRDLAHDETSDTVLREIVALRANA AALERAAAEPQATLDTGLADLRALPSENQQEPVLALASESVLASLALSRTVMFVRGEDGTFAAKLGFGHGVEAALGRMRF HETFEPDVFHLAISNSVGIFIEDAHEPKMLRRLPGWYRDTLHQVHGFVLLPVRTGERCVALLYGDWSGAQPTRRISHRDM ATLNHIGAELGRFFAKSDAGTA
Sequences:
>Translated_502_residues MTTFTEHLPQAALLDKLWTRMSERGDFPMLSDSLRATMAAIDSDNLDFTALVGVVLSDFALTQKVIRLANSAMYIAFGGN ITTVTRALMVLGMDAVGHLVVGLKLVDHFHQSNSQRIEAKLELNRALLSGCVARRLTEDADLRAGEEATVCTLMRQVGKL LVAFYLDVEWDAIRQRAAELGVDEASACAEVLGVGFDEIGREAATRWRLPDTIRTSIAPFDPHEEPEGQGDPDARIDRAD HERRQWLRAVSDCSTEVAAVMTAPGLTTVQRDARLAALAQRFTPTLDIDADALVAITRDLAHDETSDTVLREIVALRANA AALERAAAEPQATLDTGLADLRALPSENQQEPVLALASESVLASLALSRTVMFVRGEDGTFAAKLGFGHGVEAALGRMRF HETFEPDVFHLAISNSVGIFIEDAHEPKMLRRLPGWYRDTLHQVHGFVLLPVRTGERCVALLYGDWSGAQPTRRISHRDM ATLNHIGAELGRFFAKSDAGTA >Mature_501_residues TTFTEHLPQAALLDKLWTRMSERGDFPMLSDSLRATMAAIDSDNLDFTALVGVVLSDFALTQKVIRLANSAMYIAFGGNI TTVTRALMVLGMDAVGHLVVGLKLVDHFHQSNSQRIEAKLELNRALLSGCVARRLTEDADLRAGEEATVCTLMRQVGKLL VAFYLDVEWDAIRQRAAELGVDEASACAEVLGVGFDEIGREAATRWRLPDTIRTSIAPFDPHEEPEGQGDPDARIDRADH ERRQWLRAVSDCSTEVAAVMTAPGLTTVQRDARLAALAQRFTPTLDIDADALVAITRDLAHDETSDTVLREIVALRANAA ALERAAAEPQATLDTGLADLRALPSENQQEPVLALASESVLASLALSRTVMFVRGEDGTFAAKLGFGHGVEAALGRMRFH ETFEPDVFHLAISNSVGIFIEDAHEPKMLRRLPGWYRDTLHQVHGFVLLPVRTGERCVALLYGDWSGAQPTRRISHRDMA TLNHIGAELGRFFAKSDAGTA
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54868; Mature: 54737
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFTEHLPQAALLDKLWTRMSERGDFPMLSDSLRATMAAIDSDNLDFTALVGVVLSDFA CCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LTQKVIRLANSAMYIAFGGNITTVTRALMVLGMDAVGHLVVGLKLVDHFHQSNSQRIEAK HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LELNRALLSGCVARRLTEDADLRAGEEATVCTLMRQVGKLLVAFYLDVEWDAIRQRAAEL HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GVDEASACAEVLGVGFDEIGREAATRWRLPDTIRTSIAPFDPHEEPEGQGDPDARIDRAD CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH HERRQWLRAVSDCSTEVAAVMTAPGLTTVQRDARLAALAQRFTPTLDIDADALVAITRDL HHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AHDETSDTVLREIVALRANAAALERAAAEPQATLDTGLADLRALPSENQQEPVLALASES HCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH VLASLALSRTVMFVRGEDGTFAAKLGFGHGVEAALGRMRFHETFEPDVFHLAISNSVGIF HHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEE IEDAHEPKMLRRLPGWYRDTLHQVHGFVLLPVRTGERCVALLYGDWSGAQPTRRISHRDM EECCCCHHHHHHCCCHHHHHHHHHCCEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHH ATLNHIGAELGRFFAKSDAGTA HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTFTEHLPQAALLDKLWTRMSERGDFPMLSDSLRATMAAIDSDNLDFTALVGVVLSDFA CCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LTQKVIRLANSAMYIAFGGNITTVTRALMVLGMDAVGHLVVGLKLVDHFHQSNSQRIEAK HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LELNRALLSGCVARRLTEDADLRAGEEATVCTLMRQVGKLLVAFYLDVEWDAIRQRAAEL HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GVDEASACAEVLGVGFDEIGREAATRWRLPDTIRTSIAPFDPHEEPEGQGDPDARIDRAD CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH HERRQWLRAVSDCSTEVAAVMTAPGLTTVQRDARLAALAQRFTPTLDIDADALVAITRDL HHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AHDETSDTVLREIVALRANAAALERAAAEPQATLDTGLADLRALPSENQQEPVLALASES HCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH VLASLALSRTVMFVRGEDGTFAAKLGFGHGVEAALGRMRFHETFEPDVFHLAISNSVGIF HHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEE IEDAHEPKMLRRLPGWYRDTLHQVHGFVLLPVRTGERCVALLYGDWSGAQPTRRISHRDM EECCCCHHHHHHCCCHHHHHHHHHCCEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHH ATLNHIGAELGRFFAKSDAGTA HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA