| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026558
Identifier: 238026558
GI number: 238026558
Start: 980712
End: 981863
Strand: Reverse
Name: 238026558
Synonym: bglu_1g09020
Alternate gene names: NA
Gene position: 981863-980712 (Counterclockwise)
Preceding gene: 238026565
Following gene: 238026557
Centisome position: 25.13
GC content: 71.35
Gene sequence:
>1152_bases ATGCGCCCGACCGTTTCCGCCCGCCGCCGTTCGCTCGCCGCCCTGCGCCGCTGCCTGCAGGCGGCCGGCGCCGCCTGTCT CGCGCTCGCCGCGACCGCCGCCGACAGCCGCGCCGCCCCGCCCGTCGAGCGGCTGCGCGTACCGCCCGGCTTCCAGGTCG AGCTGTTCGCCGCCGACGTGCCGACCGCACGCGAAATGGCCTGGTCGCCGCGCGGCGTCCTCTACGTCGGCTCGACCGAC GGCGTCGTCCATGCGCTGACGGTCGACCGGGGCCGCGTCACCGGCCGCCACGTGGTTGCCTCCGGGCTCGATATGCCGGT CGGCGTGGCTTACCGCGACGGCGCGCTCTACATCTCGGCGATCTCGCGAATCCTGCGGCTCGACGACATCGACGCGAAGC TGGCCACGCCGCCCAAGCCGGTGGTGGTGACCGACGCGCTGCCGTCCGAGCGGCAGCACGGCTGGAAATTCATCGCGTTC GGACCGGACGGCAAGCTCTATGTGCCGACCGGTGCGCCCTGCAACATCTGCGGGCCCGATCGCGACCGCTACGCGATGCT CGGCCGGATGAACCCGGACGGCAGCGATTATCAAGTGTTCGCGCGCGGCATCCGCAACACCGTCGGCTTCGACTGGCATC CGGCGACGCACGCGCTGTGGTTCACCGACAACGGCCGCGACATGCTCGGCGACGACGTGCCCGACGACGAGCTGAATTAC GCGCCGCGCGCGGGCCTCGACTTCGGCTATCCGTATTGCCATGCCGGCGACGTGCCGGACCCGCAATACGGCAAGGGCCA TCCATGCAGCAGCTTCACGCCGCCGGTGCTCAAGCTCGGCGCGCACGTGGCGGCGCTCGGCATGCGCTTCTACCGCGGTG CGATGTTCCCGGCCGGGTATCGCGATGCGATCTTCATCGCCGAGCACGGTTCATGGAACCGCAGCAGCAAGGTCGGCTAT CGCGTGGTGAGCGTGACCGCCGGGCCGGACGGCCGCGGCGCGCGCATGCAGGTGTTCGCGCAGGGCTGGCTGCAACCCGA CGGCAGCGTCTGGGGCCGGCCCGCCGACGTGCTGCCGCTGCCGGACGGCTCGCTGCTCGTCAGCGACGATTACGCGGGCG CGATCTATCGAATCACGTATACCGGGCACTGA
Upstream 100 bases:
>100_bases GACGGCTCGCGAGGCGCTGCGGTGCAGCGCCTGCCGATCCGCGCGCAAGCTCCTACAATCCCGGCATGGTGCCTCGCGCA CGCTCCCGCCCTGCTCCGCC
Downstream 100 bases:
>100_bases CGGCGGCAGCGGAGCGCGGCTTTCGACGCGGCGTAGAATGAGGCAGGCGCTGCGGCCGCGGCGCCACGCCTTGCCCGCCT CGCCTTTGCTATCGGATCTT
Product: L-sorbosone dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADVPTAREMAWSPRGVLYVGSTD GVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISAISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAF GPDGKLYVPTGAPCNICGPDRDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGYRDAIFIAEHGSWNRSSKVGY RVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPLPDGSLLVSDDYAGAIYRITYTGH
Sequences:
>Translated_383_residues MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADVPTAREMAWSPRGVLYVGSTD GVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISAISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAF GPDGKLYVPTGAPCNICGPDRDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGYRDAIFIAEHGSWNRSSKVGY RVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPLPDGSLLVSDDYAGAIYRITYTGH >Mature_383_residues MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADVPTAREMAWSPRGVLYVGSTD GVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISAISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAF GPDGKLYVPTGAPCNICGPDRDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGYRDAIFIAEHGSWNRSSKVGY RVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPLPDGSLLVSDDYAGAIYRITYTGH
Specific function: Unknown
COG id: COG2133
COG function: function code G; Glucose/sorbosone dehydrogenases
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR012938 - InterPro: IPR011041 [H]
Pfam domain/function: PF07995 GSDH [H]
EC number: NA
Molecular weight: Translated: 41320; Mature: 41320
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADV CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCC PTAREMAWSPRGVLYVGSTDGVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISA CCHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEEEECCEEEHHH ISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAFGPDGKLYVPTGAPCNICGPD HHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHCCCEEEEECCCCCEEECCCCCCCCCCCC RDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCC APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC RDAIFIAEHGSWNRSSKVGYRVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPL CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEC PDGSLLVSDDYAGAIYRITYTGH CCCCEEEECCCCCEEEEEEEECC >Mature Secondary Structure MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADV CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCC PTAREMAWSPRGVLYVGSTDGVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISA CCHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEEEECCEEEHHH ISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAFGPDGKLYVPTGAPCNICGPD HHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHCCCEEEEECCCCCEEECCCCCCCCCCCC RDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCC APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC RDAIFIAEHGSWNRSSKVGYRVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPL CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEC PDGSLLVSDDYAGAIYRITYTGH CCCCEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]