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The map label for this gene is yciM [H]

Identifier: 238026539

GI number: 238026539

Start: 960649

End: 961821

Strand: Direct

Name: yciM [H]

Synonym: bglu_1g08830

Alternate gene names: 238026539

Gene position: 960649-961821 (Clockwise)

Preceding gene: 238026538

Following gene: 238026540

Centisome position: 24.59

GC content: 67.95

Gene sequence:

>1173_bases
ATGGATCTGGATTTCTGGTGGCTGCTGGCCATACCCGTCGCGTTCGCATGCGGATGGGTGGCGGCACGCTACGACCTCAA
CAAGCTGCTGTCCGAAAGTGCGAACCTGCCGCGTTCGTATTTTCGCGGCCTCAATTTCCTGCTCAATGAGCAGCCGGACC
AGGCGATCGACGCGTTCATCGAAGTCGCCAAGCTCGATCCCGAAACGGTCGAACTGCACTTCGCGCTCGGCAATCTGTTT
CGCCGGCGCGGCGAAACCGACCGGGCGATCCGCGTGCATCAAAACCTGCTGAACCGCGACGACCTGCCGGTCAACGAGCG
CGACCACGCGCTCTACGAGCTCGGCCAGGACTTCCTCAAGGCCGGCCTGCTCGACCGTGCCGAGGAATCGTTCCACCTGC
TCGCCGACGGCGACTACGCGCTCGGCGCGCAGCGCGCGCTGCTGACCATCTACGGGATCGAGAAGGACTGGAACAAGTCG
ATCGTGACGGCACGCAAGATCGAGGCGATGGGCGGCGGCCCGCTCGCCACCGAGATCGCTCAGTTCCACTGCGAGCTGGC
GCAGGACGCGCTCGCGAAGCAGAACGCCGACGCGGCGGCCGCGCAGCTGCGCGATGCGCTCGCGGTGAATCCGCAGAACG
TGCGCGCGACCATCCTGTCGGGCGACGCGGCCGCGGCAGCCGGCCGCCACGACGCGGCGATCGCGCACTGGCGCCGCGTC
GAGCAGCAGAACGCGGCCTATCTGCCGCTCGTCGCCGAAAAGCTGATGAAGTCGTATCTGGCGCTCGGCCGCGGCCCCGA
AGGGGCCGAACTGCTGACCGGCTACGCCGACCGCCATCCGTCGAACGACCTGCTCGACATCGTGTTCCAGTACGTGTCCG
AGCTGCGCGGCACCGAGTCGGCGCATGCGCTGGCGCGCACGCAGATGCAGAAGGCGCCGAACCTGTCGGGCATGCTGCAC
CTGCTCGAGGCGCAGATCGCCGCGGCCGACGAGCCGCGCCGCGCCGAACTGGAAATGATGCACGCGCTGGTGAAGCAGCG
CACCAAGAACCTGCCGCGCTACACCTGCCACGACTGCGGTTTCCGCGCCCGCCTGTTCTACTGGCAGTGCCCGGGCTGCA
GCGGCTGGGAAACCTACGCGCCGCGGCGCGTCGAGGCCGGCGTGCCGAACTAG

Upstream 100 bases:

>100_bases
CGAAACCCCGGTGGTGATCGACCAGCCGCCGATGCCGCCCGTCATTTAACGTTCGTCGGGCCGCCTCGCAAGCGGCCCCG
ACCTTGCTTCGGTATCACGC

Downstream 100 bases:

>100_bases
GCGCCACGACGCTTCGTCACGAACACCGCGCAGAATCATGCCTAACCTCCGGAACGAATCACCGGGAAACCTATGAAAAT
CACCATCATCGGCACCGGCT

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MDLDFWWLLAIPVAFACGWVAARYDLNKLLSESANLPRSYFRGLNFLLNEQPDQAIDAFIEVAKLDPETVELHFALGNLF
RRRGETDRAIRVHQNLLNRDDLPVNERDHALYELGQDFLKAGLLDRAEESFHLLADGDYALGAQRALLTIYGIEKDWNKS
IVTARKIEAMGGGPLATEIAQFHCELAQDALAKQNADAAAAQLRDALAVNPQNVRATILSGDAAAAAGRHDAAIAHWRRV
EQQNAAYLPLVAEKLMKSYLALGRGPEGAELLTGYADRHPSNDLLDIVFQYVSELRGTESAHALARTQMQKAPNLSGMLH
LLEAQIAAADEPRRAELEMMHALVKQRTKNLPRYTCHDCGFRARLFYWQCPGCSGWETYAPRRVEAGVPN

Sequences:

>Translated_390_residues
MDLDFWWLLAIPVAFACGWVAARYDLNKLLSESANLPRSYFRGLNFLLNEQPDQAIDAFIEVAKLDPETVELHFALGNLF
RRRGETDRAIRVHQNLLNRDDLPVNERDHALYELGQDFLKAGLLDRAEESFHLLADGDYALGAQRALLTIYGIEKDWNKS
IVTARKIEAMGGGPLATEIAQFHCELAQDALAKQNADAAAAQLRDALAVNPQNVRATILSGDAAAAAGRHDAAIAHWRRV
EQQNAAYLPLVAEKLMKSYLALGRGPEGAELLTGYADRHPSNDLLDIVFQYVSELRGTESAHALARTQMQKAPNLSGMLH
LLEAQIAAADEPRRAELEMMHALVKQRTKNLPRYTCHDCGFRARLFYWQCPGCSGWETYAPRRVEAGVPN
>Mature_390_residues
MDLDFWWLLAIPVAFACGWVAARYDLNKLLSESANLPRSYFRGLNFLLNEQPDQAIDAFIEVAKLDPETVELHFALGNLF
RRRGETDRAIRVHQNLLNRDDLPVNERDHALYELGQDFLKAGLLDRAEESFHLLADGDYALGAQRALLTIYGIEKDWNKS
IVTARKIEAMGGGPLATEIAQFHCELAQDALAKQNADAAAAQLRDALAVNPQNVRATILSGDAAAAAGRHDAAIAHWRRV
EQQNAAYLPLVAEKLMKSYLALGRGPEGAELLTGYADRHPSNDLLDIVFQYVSELRGTESAHALARTQMQKAPNLSGMLH
LLEAQIAAADEPRRAELEMMHALVKQRTKNLPRYTCHDCGFRARLFYWQCPGCSGWETYAPRRVEAGVPN

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=375, Percent_Identity=36, Blast_Score=243, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43468; Mature: 43468

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDFWWLLAIPVAFACGWVAARYDLNKLLSESANLPRSYFRGLNFLLNEQPDQAIDAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
EVAKLDPETVELHFALGNLFRRRGETDRAIRVHQNLLNRDDLPVNERDHALYELGQDFLK
HHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AGLLDRAEESFHLLADGDYALGAQRALLTIYGIEKDWNKSIVTARKIEAMGGGPLATEIA
HHHHHHCCCCEEEEECCCHHHCHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHH
QFHCELAQDALAKQNADAAAAQLRDALAVNPQNVRATILSGDAAAAAGRHDAAIAHWRRV
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCHHHHHHHHHH
EQQNAAYLPLVAEKLMKSYLALGRGPEGAELLTGYADRHPSNDLLDIVFQYVSELRGTES
HHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
AHALARTQMQKAPNLSGMLHLLEAQIAAADEPRRAELEMMHALVKQRTKNLPRYTCHDCG
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHCCC
FRARLFYWQCPGCSGWETYAPRRVEAGVPN
CEEEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLDFWWLLAIPVAFACGWVAARYDLNKLLSESANLPRSYFRGLNFLLNEQPDQAIDAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
EVAKLDPETVELHFALGNLFRRRGETDRAIRVHQNLLNRDDLPVNERDHALYELGQDFLK
HHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AGLLDRAEESFHLLADGDYALGAQRALLTIYGIEKDWNKSIVTARKIEAMGGGPLATEIA
HHHHHHCCCCEEEEECCCHHHCHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHH
QFHCELAQDALAKQNADAAAAQLRDALAVNPQNVRATILSGDAAAAAGRHDAAIAHWRRV
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCHHHHHHHHHH
EQQNAAYLPLVAEKLMKSYLALGRGPEGAELLTGYADRHPSNDLLDIVFQYVSELRGTES
HHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
AHALARTQMQKAPNLSGMLHLLEAQIAAADEPRRAELEMMHALVKQRTKNLPRYTCHDCG
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHCCC
FRARLFYWQCPGCSGWETYAPRRVEAGVPN
CEEEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]